| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2798052 | NA (NA) | 4 (0.040) | 4/166 | NT | NA | intergenic (+8/+39) | ygaP/stpA | DUF2892 family inner membrane rhodanese/DNA binding protein, nucleoid‑associated |
| ? | NC_000913 | = 2798082 | NA (NA) | noncoding (30/30 nt) | REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP192 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2797956‑2798052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTTCTCAAGCTCGTTGGTTCCACGGCATCTTATCTAACAACCTTGCCATTCCACAAAAACCGCTGATTCCT < NC_000913/2798082‑2797978 TTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCC < 1:893039/100‑1TTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACG > 2:1921446/1‑98 TGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGC < 2:1668222/98‑1 GGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCAGTGGAACCAACGAGCTTGCGAAGCGACGCCGG > 2:626774/1‑100 GTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGA > 1:1583214/1‑100 TGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTAGAACCAACGAGCTTAAGAAGCGACGCCGGA > 1:1896731/1‑99 CCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGATGT > 2:97067/1‑100 GCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGACCCAACGAGCTTGAGAAGCGACGCCGGATGTCGATGCTAGAGCGCGTCCGGCGTC < 2:118359/100‑1 CGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGATGTCGCTGCTAGGGCGCGTCCGGCGTCG < 1:1417066/100‑1 TTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGATCCAACGAGCTTGAGAAGCGACGCCGGATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTT < 1:80467/100‑1 GTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTTCTCAA < 1:97068/100‑1 CGGATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTTCTCAAGCTCGTTGGTTCCACGGCATCTTATCTAACAACCTTGCCATTCCACAAAAACCGCTGATT > 1:69007/1‑100 ATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTTTTCAAGCTTGTTGGTTCCACGGCATCTTATCTAACAACCTTGCCATTCCACAAAAACCGCTGATTCCT < 1:151495/100‑1 TTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACgccgga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2797956‑2798052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATGTCGCTGCTAGGGCGCGTCCGGCGTCGCTTCTCAAGCTCGTTGGTTCCACGGCATCTTATCTAACAACCTTGCCATTCCACAAAAACCGCTGATTCCT < NC_000913/2798082‑2797978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |