| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3330539 | NA (NA) | 5 (0.060) | 5/164 | NT | NA | noncoding (80/98 nt) | RIP243 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP243 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3330550 | NA (NA) | noncoding (91/98 nt) | RIP243 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP243 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 139 total aligned reads displayed.
ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAGTCGTCA > NC_000913/3330440‑3330636 | tGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGt < 2:1822757/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAgc > 2:1628210/1‑100 (MQ=255) gTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatc < 1:1774238‑M2/100‑4 (MQ=255) tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatca < 1:2073907‑M2/100‑5 (MQ=255) tttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatca < 1:1584090‑M2/100‑5 (MQ=255) ttATGCCGGATGCGGCGTAAACGCCTTTTCCGGCTTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcag > 1:2420762‑M2/1‑95 (MQ=255) ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcag > 1:2211681‑M2/1‑95 (MQ=255) ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcag > 1:1501744‑M2/1‑95 (MQ=255) tATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcagg < 2:2515908‑M2/100‑7 (MQ=255) aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATgcgctacgcttatcaggc < 1:1381652‑M1/100‑19 (MQ=255) aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcaggc < 2:811821‑M2/100‑8 (MQ=255) aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcagg < 1:1944636‑M2/99‑7 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATgcgctacgcttatcaggcc < 1:509282‑M1/100‑20 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCt < 1:1034381/100‑1 (MQ=255) ccGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGa > 1:2016106/1‑100 (MQ=255) cGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGAt > 1:1620991/1‑100 (MQ=255) gATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGAttt > 2:1847215/1‑100 (MQ=255) tGCGGCGTAAACGTCTTATCCTGTCTACAAAATCGTTCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTgg < 1:1162346/100‑1 (MQ=18) tGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGAttt > 1:234512/1‑98 (MQ=255) gcggctTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGc < 2:333056/100‑1 (MQ=255) gcggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGc > 1:2291577/1‑100 (MQ=255) cggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCg > 1:687135/1‑100 (MQ=255) cggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCg > 1:1016880/1‑100 (MQ=255) ggggTAAACGGCTTATCCGGCCTACAAAATCGTGGCAATTCAACATATTGCAATTTTCTTGTAGGCTTGATAAGCGTAGCGCATCAGGCTGATTTgg < 2:1443857/94‑1 (MQ=18) ggcgTAAACGCTTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGAGCATCAGGCTGATTTGGCGt < 2:274821/100‑1 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGt < 2:857001/100‑1 (MQ=255) gcgTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAAGATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGtt < 1:2458530/100‑1 (MQ=255) tAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTat > 1:1751362/1‑100 (MQ=255) aaCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTatca < 2:1333607/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTatcat > 2:2600878/1‑100 (MQ=255) ccTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAg > 1:2440858/1‑100 (MQ=255) ccTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAg > 1:2148327/1‑100 (MQ=255) ccTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAg > 2:1992503/1‑100 (MQ=255) cTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGt < 1:835514/100‑1 (MQ=255) ttATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 1:1664802/100‑1 (MQ=255) ttATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 2:1725198/100‑1 (MQ=255) ttATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTg < 2:2503593/100‑1 (MQ=255) tCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGAtt < 1:2419774/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaat < 1:1272637‑M1/100‑46 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTa < 2:920274/100‑1 (MQ=255) ggCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAAc > 2:1405955/1‑100 (MQ=255) gtttacaAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttg < 1:1299329‑M1/97‑49 (MQ=255) cTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCt > 2:1754006/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAACATATTGCACTTCTCTTGTAGGCCTGATAAGCGTAGCGCATAAAGCTGAATAGGCGTTTAAAATCAGTGATTaa > 1:1581842/1‑94 (MQ=21) aCAAAATCGTGCAAATTCAACATATTGCAATTCTCTGGTATGCCTGATAAGCGTAGCGCATCAGGCAAATTTGGCGTTTATCATCAGTGATTAACGCtt > 1:2241224/1‑99 (MQ=21) cAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTg < 1:2583536/99‑1 (MQ=255) aaaaTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTa < 2:2121777/100‑1 (MQ=255) aaaaTCGTGCAAATTCAACATATTGCAATTCGCTTGTAGGCCTGATAAGCTTATCGCATCAGGCTTATTTGGCTTTTATCATCAGTGATTAACGCt < 2:2193160/96‑1 (MQ=25) aaaTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTaa > 1:142162/1‑100 (MQ=255) aaaTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTa < 2:278880/99‑1 (MQ=255) aTCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAAt < 2:2016087/100‑1 (MQ=255) gTGCAAATTCAACATATTGCAATTCTTTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGa < 1:2350657/99‑1 (MQ=255) gTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGTTTAACGCTTGTAAATGaa < 2:1794089/100‑1 (MQ=255) tGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtag < 2:884090‑M2/100‑51 (MQ=255) gCAACTTCAAACTATTGCACTACTCTTGTAGGCCTCATACGAGTAACGCATCAGACTAATTTGGAGTTTATCATCAGTGTTTAAGGCTTGTTGGTGAACt < 2:486178/100‑1 (MQ=255) gCAAATTCAACATATTGCAATTCTCTTGTAGGTCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACt < 1:1395051/100‑1 (MQ=255) cAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaaac < 1:1299329‑M2/100‑53 (MQ=255) aaaTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCa > 2:2104059/1‑100 (MQ=255) aTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccgg < 1:1272637‑M2/100‑56 (MQ=255) aTTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAAc < 1:289346/100‑1 (MQ=255) aaCATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCct > 2:257135/1‑100 (MQ=255) aCATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCctt < 1:300981/100‑1 (MQ=255) cATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttc > 1:1453922/1‑100 (MQ=255) cATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATAATCAGTGATTAACGCTTGTAAATGAACTAAACGCcttc > 2:1376296/1‑100 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttct < 2:2283294/100‑1 (MQ=255) atatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttct > 1:1822506/1‑100 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttctt > 1:2155953/1‑100 (MQ=255) tatTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCcttctt > 1:731320/1‑100 (MQ=255) ttGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCttcttc > 1:2170751/1‑99 (MQ=255) ttGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcg > 2:1537722/1‑100 (MQ=255) tGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgt < 1:1049150/100‑1 (MQ=255) gCAATTCTCTTGTAGGCCTGATAAGCGTAGCGTATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtc < 1:346737/100‑1 (MQ=255) gCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtc > 2:569992/1‑100 (MQ=255) cAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtcg < 1:1651832/100‑1 (MQ=255) cAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtcg < 1:1992522/100‑1 (MQ=255) aaTTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTtcgtcg < 1:621207/99‑1 (MQ=255) tctcTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCtt < 2:2399810/100‑1 (MQ=255) tctcTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCCTGTAAATGAACTCAACGCCTTCTTCGTCGTCtt < 1:2287994/100‑1 (MQ=255) ctTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGt > 2:2026551/1‑100 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTc > 1:2033270/1‑100 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTc < 2:1060393/100‑1 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTc < 2:1016870/100‑1 (MQ=255) tGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTGACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTcc > 2:1693677/1‑100 (MQ=255) gtagttcTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTccc < 2:1620975/94‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTccc < 1:811829/100‑1 (MQ=255) ggCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggca < 1:509282‑M2/100‑82 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgt < 1:2535905/100‑1 (MQ=255) gcccTGATAAGCGAAGCGCATCAGGCTGATTCGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgt > 1:1789198/3‑100 (MQ=255) gCCTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcat < 2:811821‑M1/100‑94 (MQ=255) gCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcat < 1:1381652‑M2/100‑83 (MQ=255) ccTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcata < 2:2515908‑M1/100‑95 (MQ=255) ccTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcat < 1:1944636‑M1/99‑94 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgtcg > 1:551725/1‑100 (MQ=255) cTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcataa > 1:1501744‑M1/1‑5 (MQ=255) cTGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcataa > 1:2211681‑M1/1‑5 (MQ=255) cTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgtcgt < 1:52991/100‑1 (MQ=255) tGATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcataaa < 1:2073907‑M1/100‑97 (MQ=255) tGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgtcgtc > 2:1845297/1‑100 (MQ=255) tGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAgtcgtc > 2:1039464/1‑100 (MQ=255) gATgcgctacgcttatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcataaac < 2:1675864‑M1/100‑98 (MQ=255) | ACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCAATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCTGATTTGGCGTTTATCATCAGTGATTAACGCTTGTAAATGAACTCAACGCCTTCTTCGTCGTCTTCGTCCCAGTCGTCA > NC_000913/3330440‑3330636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |