Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,582,206 Δ1,222 bp 100% IS1‑mediated [yhhZ]yrhA [yhhZ], yrhA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3582206 3584146–3583427 1222–1941 146 [0] [55] 56 [yhhZ]–[insB1] [yhhZ], yrhA, insA, [insB1]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 35822050 (0.000)120 (1.230) 75/178 NT 100% coding (343/1179 nt) yhhZ putative Hcp1 family polymorphic toxin protein; putative colicin‑like DNase/tRNase activity
?NC_000913 3583428 = NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 146 total aligned reads displayed.

CAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCT  >  NC_000913/3582106‑3582304
                                                                                                   |                                                                                                   
cAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGTCGCTTTTTTATCGGCTATtc                                                                                                     >  2:1797282/1‑100 (MQ=255)
cAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATtc                                                                                                     >  1:991117/1‑100 (MQ=255)
   ttatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggt                                                                                                  <  2:1893694‑M1/100‑4 (MQ=255)
   ttatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggt                                                                                                  <  1:1840947‑M1/100‑4 (MQ=255)
    tatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtg                                                                                                 <  2:1960693‑M1/100‑5 (MQ=255)
    tatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtg                                                                                                 <  2:2018773‑M1/100‑5 (MQ=255)
    tatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtg                                                                                                 <  1:1818084‑M1/100‑5 (MQ=255)
    tatttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtg                                                                                                 <  1:1734895‑M1/100‑5 (MQ=255)
     atttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtga                                                                                                <  1:2492513‑M1/100‑6 (MQ=255)
     atttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtga                                                                                                >  1:2117682‑M1/1‑95 (MQ=255)
        tatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgc                                                                                             <  2:863413‑M1/100‑9 (MQ=255)
         atGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgct                                                                                            >  2:2296863‑M1/1‑91 (MQ=255)
          tGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATTTGTTATTCggtgatactg                                                                                           >  2:1049930‑M1/1‑90 (MQ=255)
          tGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgct                                                                                            >  1:1430695‑M1/1‑90 (MQ=255)
            ggATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgcc                                                                                         <  1:308631‑M1/100‑13 (MQ=255)
             gATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgcca                                                                                        <  1:294576‑M1/100‑14 (MQ=255)
              aTTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaa                                                                                       <  2:1598736‑M1/100‑15 (MQ=255)
              aTTTGACTTCTATCGAATAAATAAATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGTCTATTCggtgatgctgacaa                                                                                       >  2:2236471‑M1/1‑86 (MQ=255)
               tttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaac                                                                                      <  1:1201545‑M1/100‑16 (MQ=255)
                ttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaact                                                                                     <  2:775855‑M1/100‑17 (MQ=255)
                ttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaact                                                                                     <  2:902689‑M1/100‑17 (MQ=255)
                   aCTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttac                                                                                  <  2:2336598‑M1/100‑20 (MQ=255)
                    cTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttact                                                                                 <  1:148013‑M1/100‑21 (MQ=255)
                     ttCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactg                                                                                <  1:1427588‑M1/100‑22 (MQ=255)
                         aTCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgattt                                                                            >  2:29674‑M1/1‑75 (MQ=255)
                           cGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttag                                                                          >  2:2302208‑M1/1‑73 (MQ=255)
                           cGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttag                                                                          <  1:1228478‑M1/100‑28 (MQ=255)
                           cGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttag                                                                          <  2:1734352‑M1/100‑28 (MQ=255)
                            gAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagt                                                                         >  2:2599112‑M1/1‑72 (MQ=255)
                            gAATAAATAGACTTGGTAGATGGGAAAAGAATTATTATATACAACTAAGAGGCGCTTTTTTATCAGCTAATCggtgatgctgccaacttactgattt                                                                            >  2:1226550‑M1/1‑72 (MQ=255)
                             aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg                                                                        <  1:2417095‑M1/100‑30 (MQ=255)
                             aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg                                                                        <  2:1852227‑M1/100‑30 (MQ=255)
                               taaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgta                                                                      <  2:2193097‑M1/100‑32 (MQ=255)
                                aaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtat                                                                     <  2:827365‑M1/100‑33 (MQ=255)
                                 aataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatg                                                                    <  2:1156634‑M1/100‑34 (MQ=255)
                                    aGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatg                                                                 <  1:329812‑M1/100‑37 (MQ=255)
                                    aGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatg                                                                 <  1:1585136‑M1/100‑37 (MQ=255)
                                    aGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatg                                                                 >  2:178866‑M1/1‑64 (MQ=255)
                                    aGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatg                                                                 >  2:181239‑M1/1‑64 (MQ=255)
                                     gATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTTTCTTCTTTTCggtgatgctgccaacttactgatttagtgtatgatg                                                                 >  2:875598‑M1/1‑63 (MQ=255)
                                       tttGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtg                                                              >  2:364825‑M1/1‑61 (MQ=255)
                                         tGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                            >  2:1077573‑M1/1‑59 (MQ=255)
                                             aGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                        <  2:1662769‑M1/100‑46 (MQ=255)
                                             aGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                        <  2:1429659‑M1/100‑46 (MQ=255)
                                             aGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                        <  2:748755‑M1/100‑46 (MQ=255)
                                              ctttggAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                       <  2:628177‑M1/98‑47 (MQ=255)
                                               aTTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                      <  2:39728‑M1/100‑48 (MQ=255)
                                               aTTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                      <  1:2192059‑M1/100‑48 (MQ=255)
                                                ttGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                     >  2:1968650‑M1/1‑52 (MQ=255)
                                                ttGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                     <  1:479595‑M1/100‑49 (MQ=255)
                                                ttGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaag                                                     >  1:628181‑M1/1‑52 (MQ=255)
                                                 tGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                    <  2:1076812‑M1/100‑50 (MQ=255)
                                                 tGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                    <  1:2054289‑M1/100‑50 (MQ=255)
                                                  ggAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                   >  2:345919‑M1/1‑50 (MQ=255)
                                                  ggAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgaattagggtatgacggtgtttttgaggtg                                                   >  2:2323711‑M1/1‑50 (MQ=255)
                                                   gAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgattgtgtttttgaggtgc                                                  <  2:5136‑M1/100‑52 (MQ=255)
                                                   gAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                    >  1:2548587‑M1/1‑49 (MQ=255)
                                                   gAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgacaacttactgatttagtgtatgatggtgtttttgaggtgc                                                  >  1:324962‑M1/1‑49 (MQ=255)
                                                      aaGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                               <  1:924081‑M1/100‑55 (MQ=255)
                                                       aGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                              <  2:2004115‑M1/100‑56 (MQ=255)
                                                        gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttgctgatttagtgtatgatggtgtttttgaggtgctccag                                             >  2:1438330‑M1/1‑44 (MQ=255)
                                                           ttattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaaattactgatttagtgtatgatggtgtttttgaggtgctaca                                              >  2:87302‑M1/1‑41 (MQ=255)
                                                             attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                        >  2:2519291‑M1/1‑39 (MQ=255)
                                                                   taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                  <  1:1638352‑M1/100‑68 (MQ=255)
                                                                   taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                  <  2:2532120‑M1/100‑68 (MQ=255)
                                                                   taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                  <  2:756191‑M1/100‑68 (MQ=255)
                                                                   taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgagatcggaa                                  >  2:1330067‑M1/1‑33 (MQ=255)
                                                                    aCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                 >  2:693689‑M1/1‑32 (MQ=255)
                                                                     cAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                >  1:266223‑M1/1‑31 (MQ=255)
                                                                     cAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                <  1:1422620‑M1/100‑70 (MQ=255)
                                                                      aaCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttattgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                <  1:6694‑M1/99‑70 (MQ=255)
                                                                       aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta                              <  1:1600187‑M1/100‑72 (MQ=255)
                                                                         tAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                            <  1:1713525‑M1/100‑74 (MQ=255)
                                                                          aaGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                           <  1:477698‑M1/100‑75 (MQ=255)
                                                                           agagGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                          <  1:878479‑M1/100‑76 (MQ=255)
                                                                             agGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                         <  2:2117657‑M1/99‑77 (MQ=255)
                                                                              ggCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgattgagtttttgaggtgctccagtggctactgtttctatcagctg                       >  1:2251819‑M1/1‑22 (MQ=255)
                                                                                cgcTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                     >  1:2421304‑M1/1‑20 (MQ=255)
                                                                                  cTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                   <  1:1702397‑M1/100‑83 (MQ=255)
                                                                                     ttttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                <  1:29674‑M1/100‑86 (MQ=255)
                                                                                     ttttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc                <  1:1357927‑M1/100‑86 (MQ=255)
                                                                                       ttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg              >  1:2603297‑M1/1‑13 (MQ=255)
                                                                                       ttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg              <  2:2354503‑M1/100‑88 (MQ=255)
                                                                                        tATCGGCTATTCggtgatgctgccaacttactaatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt             >  1:2517949‑M1/1‑12 (MQ=255)
                                                                                         aTCGGCTATTCggtgatgctgccaacttactgatttggtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt            >  1:1871052‑M1/1‑11 (MQ=255)
                                                                                          tCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc           <  1:1007507‑M1/100‑91 (MQ=255)
                                                                                          tCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc           <  2:76585‑M1/100‑91 (MQ=255)
                                                                                           cGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctttccctcctgttca          <  2:1639218‑M1/100‑92 (MQ=255)
                                                                                           cGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca          <  2:358491‑M1/100‑92 (MQ=255)
                                                                                             tgttttcggtgttgctgccaacttactgatttagtgtctgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc        <  1:387854‑M1/96‑94 (MQ=255)
                                                                                             gcgatttggcgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagttgtttctctttctatcagctgtccctcctgttca          <  2:160829‑M1/95‑92 (MQ=255)
                                                                                             gCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc        <  2:17469‑M1/100‑94 (MQ=255)
                                                                                                aTTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta      >  1:2572395‑M1/1‑4 (MQ=255)
                                                                                                 ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact    <  1:178868‑M1/100‑98 (MQ=255)
                                                                                                 ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact    <  1:181241‑M1/100‑98 (MQ=255)
                                                                                                 ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact    <  2:90289‑M1/100‑98 (MQ=255)
                                                                                                 ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagatgctccagtggcttctgtttctatcagctgtccctcctgttcagctact    >  1:1362264‑M1/1‑3 (MQ=255)
                                                                                                  tCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg   >  1:2202197‑M1/1‑2 (MQ=255)
                                                                                                   cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga  >  2:2171013‑M1/1‑1 (MQ=255)
                                                                                                   cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga  >  1:425038‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCT  >  NC_000913/3582106‑3582304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.