New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3908387 =NA (NA)5 (0.060) 4/164 NT NA noncoding (1/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3908412 = NA (NA)noncoding (26/64 nt) REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences REP283 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 152 total aligned reads displayed.

TCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCT  >  NC_000913/3908288‑3908485
                                                                                                   |                                                                                                  
cccagaggggcgaggggaccgaccgagcgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaag                                                                                                    <  2:560943‑M1/1‑1 (MQ=255)
 cAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGCGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGc                                                                                                   >  2:2015948/1‑100 (MQ=255)
  aGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGcc                                                                                                  <  1:1342901/100‑1 (MQ=255)
   gggCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCt                                                                                                 >  1:1995448/1‑100 (MQ=255)
    ggCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTg                                                                                                >  2:1280738/1‑100 (MQ=255)
    gaggggcgagggtaccgaccgagcgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTg                                                                                                <  2:656778‑M1/5‑1 (MQ=255)
     gCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGa                                                                                               <  1:1011800/100‑1 (MQ=255)
      ggggcgaggggaccgaccgagcgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGAt                                                                                              >  1:596545‑M1/94‑100 (MQ=255)
      ggggcgaggggaccgaccgagcgcctttttgactctgtacacggttaacactttgccggacgcggcgtgaacgcctgatccggccaacggtaaGCCTGa                                                                                               >  2:1636988‑M1/94‑99 (MQ=255)
      cATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGAt                                                                                              <  2:98052/100‑1 (MQ=255)
        tGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGc                                                                                            >  2:2652939/1‑100 (MQ=255)
        tGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGc                                                                                            <  2:629482/100‑1 (MQ=255)
        tGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGc                                                                                            >  2:1645186/1‑100 (MQ=255)
        ggcgaggggaccgaccgagcgcctttttgactctgtacacggttaacactttgcctgatgcggcgtgaacgcctgatcctgcctacggtaaGCCTGAt                                                                                              >  2:1306910‑M1/92‑98 (MQ=255)
         ggAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCa                                                                                           <  1:1988757/100‑1 (MQ=255)
         ggAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCa                                                                                           >  1:1934552/1‑100 (MQ=255)
            aggtgaccgaccgagcgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGa                                                                                               >  2:2278219‑M1/88‑93 (MQ=255)
             tccgatctagtagAAGTTCAAATTACGATCCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTc                                                                                       <  1:234047/93‑1 (MQ=255)
              ttGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCg                                                                                      <  1:705779/100‑1 (MQ=255)
               tGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTctc                                                                                     <  1:1799338/100‑3 (MQ=255)
               tGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGc                                                                                     >  2:1082255/1‑100 (MQ=255)
               tGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGc                                                                                     >  2:788039/1‑100 (MQ=255)
                gCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCt                                                                                    <  2:1934534/100‑1 (MQ=255)
                gCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCt                                                                                    <  2:632769/100‑1 (MQ=255)
                 ccGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCt                                                                                    <  1:1582151/99‑1 (MQ=255)
                  cGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGAGCAGTTTCAACCATACTCATTGAAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTaa                                                                                  >  2:2192223/1‑100 (MQ=255)
                     agtagAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTcagatcgga                                                                               >  2:234045/1‑92 (MQ=255)
                     agtagAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCa                                                                               >  1:1210501/1‑100 (MQ=255)
                     agtagAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCa                                                                               <  1:1197033/100‑1 (MQ=255)
                        gagcgcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGc                                                                            >  2:1716940‑M1/76‑100 (MQ=255)
                        agAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGc                                                                            <  1:1855810/100‑1 (MQ=255)
                         gAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCt                                                                           <  2:1156453/100‑1 (MQ=255)
                           aGTTCAAATTACGCACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTa                                                                         >  1:1800732/1‑100 (MQ=255)
                           aGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTa                                                                         >  1:73876/1‑100 (MQ=255)
                            gcctttttgactctgtacacggttaacactttgccggatgcggcgtgaacgcctgatccggcctacggtaaGCCTGATGCACTTCGCTAATCAGGCTTAc                                                                        >  1:1470175‑M1/72‑100 (MQ=255)
                             ttCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAcc                                                                       >  2:2212393/1‑100 (MQ=255)
                             ttCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTAcc                                                                       <  1:215390/100‑1 (MQ=255)
                                aaaTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTa                                                                    <  2:506285/100‑1 (MQ=255)
                                aaaTTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTa                                                                    <  2:506263/100‑1 (MQ=255)
                                    tACGAACCTGAATTTTACTCGGGTCAGTTTTAACCATACTCATTGTAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGgcc                                                                <  1:672849‑M1/100‑4 (MQ=255)
                                     aCGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGgccg                                                               <  2:1911513‑M1/100‑5 (MQ=255)
                                         aCCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATc                                                           <  1:275805/100‑1 (MQ=255)
                                          ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                          <  1:1398585/100‑1 (MQ=255)
                                          ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                          <  1:729417/100‑1 (MQ=255)
                                          ccTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCa                                                          >  1:543384/1‑100 (MQ=255)
                                           cTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAg                                                         >  2:2528653/1‑100 (MQ=255)
                                           cTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAg                                                         <  1:1721580/100‑1 (MQ=255)
                                            tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAgg                                                        <  1:1417787/100‑1 (MQ=255)
                                            tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAgg                                                        >  1:1437824/1‑100 (MQ=255)
                                            tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAgg                                                        >  2:2177130/1‑100 (MQ=255)
                                            tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAgg                                                        >  2:727648/1‑100 (MQ=255)
                                            tGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACAGTAGGCCGGATCAgg                                                        >  1:171791/1‑100 (MQ=255)
                                              aaTTTTACTCGGGGTAGTTTCAACCATACTCATTGCTATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                      <  1:1580119/100‑1 (MQ=255)
                                              aaTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                      <  2:879821/100‑1 (MQ=255)
                                              aaTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                      <  1:979688/100‑1 (MQ=255)
                                              aaTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                      <  1:1395206/100‑1 (MQ=255)
                                               aTTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCg                                                      >  1:1318452/1‑99 (MQ=255)
                                                 tttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTc                                                   <  1:210173/100‑1 (MQ=255)
                                                 tttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTc                                                   <  2:769047/100‑1 (MQ=255)
                                                  ttACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCa                                                  <  1:2112071/100‑1 (MQ=255)
                                                   tACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAc                                                 <  1:2482457/100‑1 (MQ=255)
                                                    aCTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcg                                                >  1:1121170/1‑100 (MQ=255)
                                                       cGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccg                                             <  1:1665299/100‑1 (MQ=255)
                                                        ggggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccgc                                            >  1:2068547/1‑100 (MQ=255)
                                                        ggggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCAcgccgc                                            <  2:911157/100‑1 (MQ=255)
                                                         gggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCA                                           <  1:2532772‑M2/100‑1 (MQ=255)
                                                          ggCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCAT                                          <  2:2329334‑M2/100‑1 (MQ=255)
                                                              gTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGgccggatgcggcgtgaacgcctgatccgg                                      <  2:463444‑M1/100‑30 (MQ=255)
                                                              gTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGG                                      <  1:841436‑M2/100‑1 (MQ=255)
                                                               tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCCCTTCGCTAATCAGGCTTACCGTAGgccggatgcggcgtgaacgcctgatccggc                                     <  1:2518702‑M1/100‑31 (MQ=255)
                                                               tttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGC                                     >  1:2652971‑M2/1‑100 (MQ=255)
                                                                ttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGgccggatgcggcgtgaacgcctgatccggcc                                    <  1:1239308‑M1/100‑32 (MQ=255)
                                                                ttCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCa                                    >  1:1354111/1‑100 (MQ=255)
                                                                  cAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCaaa                                  >  1:871556/1‑100 (MQ=255)
                                                                    aCCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGgccggatgcggcgtgaacgcctgatccggcctacg                                <  1:470097‑M1/100‑36 (MQ=255)
                                                                     ccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAgtg                               >  1:2527790/1‑100 (MQ=255)
                                                                        tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTa                            >  1:2313783/1‑100 (MQ=255)
                                                                           tCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGTCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAAcc                         >  2:1199615/1‑100 (MQ=255)
                                                                            cATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCg                        >  2:386176/1‑100 (MQ=255)
                                                                             aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGTAACAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgt                       >  1:984271/1‑100 (MQ=255)
                                                                             aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgt                       >  1:641595/1‑100 (MQ=255)
                                                                             aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCgt                       >  2:811580/1‑100 (MQ=255)
                                                                                gatctCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTa                    <  2:471063/96‑1 (MQ=255)
                                                                                 cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                   >  1:1462069/1‑100 (MQ=255)
                                                                                 cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                   >  2:1725814/1‑100 (MQ=255)
                                                                                 cAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTAc                   >  1:2201595/1‑100 (MQ=255)
                                                                                  aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACa                  <  1:100716/100‑1 (MQ=255)
                                                                                  aaTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCCCATCCGGCAAAGTGTTAACCGTGTACa                  >  1:1124548/1‑100 (MQ=255)
                                                                                   aTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACag                 >  1:1667485/1‑100 (MQ=255)
                                                                                     cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTaagatc               >  1:471067/1‑95 (MQ=255)
                                                                                     cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACagag               >  1:1947428/1‑100 (MQ=255)
                                                                                     cTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGACGCATCCGGCAAAGTGTTAACCGTGTACagag               >  2:1202066/1‑100 (MQ=255)
                                                                                       tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACTCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTc             <  2:562751/100‑1 (MQ=255)
                                                                                       tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTc             <  2:322486/100‑1 (MQ=255)
                                                                                       tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTc             <  2:894357/100‑1 (MQ=255)
                                                                                          ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa          >  2:659018/1‑100 (MQ=255)
                                                                                          ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa          <  2:1831162/100‑1 (MQ=255)
                                                                                          ccTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCaaa          <  2:1831404/100‑1 (MQ=255)
                                                                                              aTCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAgg      <  1:225129/100‑1 (MQ=255)
                                                                                                cGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTGACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGgcg    >  2:923510/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
TCAGGGCATGGAATTTGCCGTAGTAGAAGTTCAAATTACGAACCTGAATTTTACTCGGGGCAGTTTCAACCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACCGTGTACAGAGTCAAAAAGGCGCT  >  NC_000913/3908288‑3908485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.