New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4148478NA (NA)8 (0.090) 6/164 NT NA noncoding (49/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4148511 NA (NA)noncoding (82/82 nt) REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577
                                                                                                   |                                                                                                   
gAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                                                                                     >  2:443477/1‑100 (MQ=255)
gAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                                                                                     >  1:795970/1‑100 (MQ=255)
 aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    <  1:2326949‑M1/100‑2 (MQ=255)
  aaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    >  2:2619356‑M1/1‑98 (MQ=255)
     gcgatcaggtgggtaatcagtaattatcagccaggcgctatttgccggatgcgacgcttgacgcgtCTTATCCAGCCTACCGCCGCGATCTGTAGGCCgg                                                                                                >  1:1241567‑M1/67‑100 (MQ=255)
       gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggat                                                                                              <  2:456994‑M1/100‑8 (MQ=255)
       gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggat                                                                                              <  1:2157418‑M1/100‑8 (MQ=255)
       gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTAGCGTAAACGCCTTATCCAGCCTACCACCGCGATCTGTAGgccggat                                                                                              >  1:2226450‑M1/1‑93 (MQ=255)
       gatcaggtgggtaatcagtaattatcagccaggtgctatttgccggatgcgacgcttgacgcgtCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGAt                                                                                              >  1:667307‑M1/65‑100 (MQ=255)
          gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                                                                           <  1:2033213/100‑1 (MQ=255)
           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  1:2415222/1‑100 (MQ=255)
           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  2:2253623/1‑100 (MQ=255)
            cTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAc                                                                                         >  1:1335083/1‑100 (MQ=255)
              gAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgc                                                                                       >  1:2224820/1‑100 (MQ=255)
               aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                                                                                      <  1:2572993/100‑1 (MQ=255)
                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                                   >  2:1353726/1‑100 (MQ=255)
                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCAGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                                   >  2:1593403/1‑100 (MQ=255)
                    aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacg                                                                                 <  1:1299717‑M1/100‑21 (MQ=255)
                     gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc                                                                                >  2:1850422/1‑100 (MQ=255)
                     gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc                                                                                >  1:2171065/1‑100 (MQ=255)
                       tCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCaa                                                                                  >  2:792487/1‑96 (MQ=255)
                        cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc                                                                             >  2:2553158/1‑100 (MQ=255)
                           tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  1:1004687‑M2/100‑1 (MQ=255)
                           tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          >  1:2012511‑M2/1‑100 (MQ=255)
                           attatcagccaggcgctatttgccggatgcgacgcttgacgcgtCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCa                                                                          >  1:65159‑M1/45‑100 (MQ=255)
                             tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatc                                                                        <  1:607164‑M1/100‑30 (MQ=255)
                             tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC                                                                        <  2:685774‑M2/100‑1 (MQ=255)
                             tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATC                                                                        <  2:1763178‑M2/100‑1 (MQ=255)
                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatcc                                                                       <  2:1036857‑M1/100‑31 (MQ=255)
                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggataagacgcttgacgcgtcttatcc                                                                       <  1:2347302‑M1/100‑31 (MQ=255)
                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC                                                                       <  2:2611440‑M2/100‑1 (MQ=255)
                                aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccgg                                                                     <  1:2436715‑M1/100‑33 (MQ=255)
                                 cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggc                                                                    <  1:1019971‑M1/100‑34 (MQ=255)
                                  aTTGCGGCAGTTGTGTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  2:1662215‑M1/100‑35 (MQ=255)
                                  aTTGCGGCAGTTGTATTGCCGGATGTGGTGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCa                                                                   <  1:2084776/100‑1 (MQ=255)
                                  aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  2:2228285‑M1/100‑35 (MQ=255)
                                      cGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa                                                               >  1:1292719/1‑100 (MQ=255)
                                           gTTGTCTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGCTCTGTAGGCCGGCTAAGACGCGTCAAGCGTCGCATCCGGCACATAGCGcc                                                          >  2:1171569/1‑100 (MQ=37)
                                            ttGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCt                                                         <  2:2069882/100‑1 (MQ=255)
                                             tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                                        <  2:2496000/100‑1 (MQ=255)
                                              gTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTgg                                                       <  1:2553188/100‑1 (MQ=255)
                                                aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGcn                                                     <  2:48512/100‑2 (MQ=255)
                                                aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCAGGCAAATAGAGCCTggat                                                     >  1:2481996/1‑98 (MQ=255)
                                                 ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                    <  1:1689194/100‑1 (MQ=255)
                                                 ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                                    <  1:1886649/100‑1 (MQ=255)
                                                  tGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                   >  1:1476808/1‑100 (MQ=255)
                                                  tGCCGGATGTGGCGTAAACGCCTTATCCAACCTACCGCCGCGATCTGTAGGCCGGATAAGAAGCGTCAAGCGACGCATCCGACAAATAGCGTTTGGc                                                      >  1:385599/1‑97 (MQ=37)
                                                   gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  <  1:1625808/100‑1 (MQ=255)
                                                   gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  <  1:1847512/100‑1 (MQ=255)
                                                       gATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAAtt                                              <  2:322237/100‑1 (MQ=255)
                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            >  1:2632227/1‑100 (MQ=255)
                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            <  2:836972/100‑1 (MQ=255)
                                                           tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          <  2:1978093/100‑1 (MQ=255)
                                                            ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         >  1:1935115/1‑100 (MQ=255)
                                                            ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         <  2:1903546/100‑1 (MQ=255)
                                                               gTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTa                                      >  2:832184/1‑100 (MQ=255)
                                                                tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                                     <  2:2415192/100‑1 (MQ=255)
                                                                nacaCGCCTTATCCAGCCTACAGCCGCGTTCTGTAGGCCGGATAAGACGAGTCCAGCGTCGCATCCGGCACATAGCGCGTGGCTGATAATTACTGATTa                                      >  2:1236119/4‑99 (MQ=37)
                                                                 aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                                    <  2:40578/100‑1 (MQ=255)
                                                                     gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                  >  2:982210/1‑98 (MQ=255)
                                                                     gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                                >  2:1733055/1‑100 (MQ=255)
                                                                      ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               >  1:1535988/1‑100 (MQ=255)
                                                                      ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               <  1:2534546/100‑1 (MQ=255)
                                                                      ccTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCt                               >  2:1098094/1‑100 (MQ=255)
                                                                       CTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTg                              >  2:1292706‑M1/1‑100 (MQ=255)
                                                                         TATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt                            <  2:1801681‑M1/100‑1 (MQ=255)
                                                                         TATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGGCAAGCGTCGCAGCCGGCAAATAGCGCCTTACTGATAATTACTGATTACCCACCTGAt                            <  2:2251909‑M1/100‑1 (MQ=255)
                                                                          ATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATc                           >  1:1365433‑M1/1‑100 (MQ=255)
                                                                           TCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          >  1:2044350‑M1/1‑100 (MQ=255)
                                                                            CCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         <  1:471326‑M1/100‑1 (MQ=255)
                                                                            CCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  2:1506326‑M1/1‑100 (MQ=255)
                                                                            CCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCCGGCTGATAATTACTGATTACCCAACTGATCGc                         <  2:2358907‑M1/100‑1 (MQ=255)
                                                                             CAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGcc                        <  1:1754157‑M1/100‑1 (MQ=255)
                                                                             CAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  2:1197454‑M1/1‑99 (MQ=255)
                                                                              aGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCa                       <  1:832193/100‑1 (MQ=255)
                                                                              aGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCa                       >  1:367896/1‑100 (MQ=255)
                                                                               gCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt                      <  1:1412608/100‑1 (MQ=255)
                                                                               gCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCAt                      >  2:707481/1‑100 (MQ=255)
                                                                                 cTACCGCCGCGATCTGTAACTCAGATAAGACACGTAAAGCTTCTCAACCGGTAAATAGCGTCTGGATGATAATTTTTGATTACTCATCTTATCTCCATAg                    >  2:1183304/1‑100 (MQ=255)
                                                                                  tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                   >  2:300236/1‑100 (MQ=255)
                                                                                  tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                   >  1:1230411/1‑100 (MQ=255)
                                                                                  tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg                   <  2:1526089/100‑1 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               <  1:2521022/100‑1 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  2:759922/1‑100 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  1:104335/1‑100 (MQ=255)
                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg               >  1:474316/1‑100 (MQ=255)
                                                                                      gccgcGATCTGTAGACCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAATAATTACCCACCTGATCGCCATAgg                   >  2:1831923/1‑96 (MQ=255)
                                                                                       ccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgt              >  2:88114/1‑100 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:733458/100‑1 (MQ=255)
                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  2:2358740/100‑1 (MQ=255)
                                                                                         gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgt            >  1:750907/1‑100 (MQ=255)
                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          <  2:800697/100‑1 (MQ=255)
                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  2:317008/100‑1 (MQ=255)
                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  1:206820/100‑1 (MQ=255)
                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  1:1926674/100‑1 (MQ=255)
                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  2:104188/100‑1 (MQ=255)
                                                                                              cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt       <  2:2003756/100‑1 (MQ=255)
                                                                                              cTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt       <  2:1336261/100‑1 (MQ=255)
                                                                                                gTAGGCCGCATAAGACGCGTCAAGCGTCTCATCCGGAAAATAGCGTCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtg           <  2:1837928/94‑1 (MQ=38)
                                                                                                   ggCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgcaat  <  2:2228285‑M2/100‑67 (MQ=255)
                                                                                                   |                                                                                                   
GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.