| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4171607 | 0 (0.000) | 38 (0.420) | 11/166 | NT | 100% | intergenic (+63/‑30) | rrlB/rrfB | 23S ribosomal RNA of rrnB operon/5S ribosomal RNA of rrnB operon |
| ? | NC_000913 | = 4213022 | NA (NA) | intergenic (+76/‑18) | rrlE/rrfE | 23S ribosomal RNA of rrnE operon/5S ribosomal RNA of rrnE operon | |||||
ACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC > NC_000913/4171513‑4171706 | aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgct > 2:2020835‑M1/1‑95 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctg < 2:1137511‑M1/100‑17 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 1:1386410‑M1/100‑18 (MQ=255) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctga < 2:2126409‑M1/100‑18 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TTAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:1430354‑M1/100‑19 (MQ=255) aaCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:2557987‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAATATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:2297889‑M1/100‑20 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgccttctgat < 1:2362079‑M1/100‑19 (MQ=255) aCCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1422119‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:1134211‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1225587‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 1:2194258‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatt < 2:1193117‑M1/100‑20 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:1331359‑M1/100‑21 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgat < 1:201365‑M1/98‑19 (MQ=255) ccGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttcttatt < 2:799864‑M1/99‑20 (MQ=255) cGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattta < 1:2464852‑M1/100‑22 (MQ=255) cGTGAGGCTTAACCGTACAACGCCTAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgattt < 2:1079662‑M1/100‑21 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 1:915808‑M1/100‑23 (MQ=255) gTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 1:148514‑M1/100‑23 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaa < 1:2190937‑M1/100‑23 (MQ=255) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaat < 2:1232651‑M1/100‑24 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:2561845‑M1/100‑25 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:952060‑M1/100‑25 (MQ=255) gAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:811603‑M1/100‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 1:1758688‑M1/100‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 1:1779809‑M1/100‑25 (MQ=255) aGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:703011‑M1/100‑26 (MQ=255) aGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:424077‑M1/100‑26 (MQ=255) tgcTTAACCTTAAAAGGCCGAAGCTGTTTTTGCGGATTGAGAGAAGATTTTCAGACTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 2:521572‑M1/99‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:2174402‑M1/100‑26 (MQ=255) ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:1316647‑M1/100‑27 (MQ=255) ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:1317949‑M1/100‑27 (MQ=255) gCTTAACCTTACAACGCCGAAGGTGTTTTGGCGGTTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatct < 1:925884‑M1/99‑26 (MQ=255) gCTTAACCTTACAACGCCGAAGCTGTTTTTGCGGA‑TGAGAGAAGTTTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatc < 2:2439366‑M1/97‑25 (MQ=255) gCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctg < 1:1942014‑M1/100‑27 (MQ=255) aCCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcag < 2:1616973‑M1/100‑33 (MQ=255) aCGCCGAAGATGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaa < 1:2020854‑M1/100‑41 (MQ=255) agatgttTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctc < 2:1918458‑M1/97‑48 (MQ=255) aTCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatcctccaaaacaccttcggcgttgtaaggttaagcctcacggt > 1:2657766‑M1/1‑6 (MQ=255) aTCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggt > 2:627743‑M1/1‑6 (MQ=255) aTCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggt > 1:762721‑M1/1‑6 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggtt < 2:2293582‑M1/100‑96 (MQ=255) tCAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaaacctcacggtt > 1:309490‑M1/1‑5 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc > 2:1611894‑M1/1‑4 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:2050707‑M1/100‑97 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:1548984‑M1/100‑97 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc > 1:1979203‑M1/1‑4 (MQ=255) cAGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttc < 2:1362871‑M1/100‑97 (MQ=255) aGAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttca < 1:2411131‑M1/100‑98 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctccatccgccaaaacaccttcggcgttgtaaggttacccctccccgttcat > 2:135709‑M1/1‑2 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat < 1:77950‑M1/100‑99 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat > 2:24875‑M1/1‑2 (MQ=255) gAccgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcat < 1:74675‑M1/100‑99 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 2:2582181‑M1/100‑100 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 2:2123152‑M1/100‑100 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 2:2018924‑M1/100‑100 (MQ=255) accgcttctgcgttctgatttaatctgtatcaggctgaaaatcttctctcaatccgccaaaacaccttcggcgttgtaaggttaagcctcacggttcatt < 2:852151‑M1/100‑100 (MQ=255) | ACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGA‑TGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC > NC_000913/4171513‑4171706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |