BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4317917 =	NA (NA)	4 (0.040)	4/164	NT	NA	noncoding (1/83 nt)	REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4317949 =	NA (NA)	4 (0.040)	4/164	NT	NA	noncoding (33/83 nt)	REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 157 total aligned reads displayed.

CGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCA  >  NC_000913/4317819‑4318016

cgtatacacagctgctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagg                                                                                                     <  1:265741‑M1/1‑1 (MQ=255)

cgtatacacagctgctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGt                                                                                                    <  2:426623‑M1/2‑1 (MQ=255)

 gtatatacagctgctggtgttatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagg                                                                                                     >  2:640254‑M1/98‑98 (MQ=255)

  tatacacagctgctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCg                                                                                                  >  1:565420‑M1/97‑100 (MQ=255)

   ttGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCgg                                                                                                 <  1:886530/100‑1 (MQ=255)

   atacacagcttctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCgg                                                                                                 >  1:2482601‑M1/96‑100 (MQ=255)

    tacacagctgctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGa                                                                                                <  2:2611195‑M1/6‑1 (MQ=255)

     gAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGAt                                                                                               >  2:2638443/1‑100 (MQ=255)

     acacagctgctggtgtcatcggttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCgg                                                                                                 >  2:657160‑M1/94‑98 (MQ=255)

       ggACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGTTGTCGGATGc                                                                                             >  2:1822939/1‑100 (MQ=255)

       ggACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGc                                                                                             <  1:1251900/100‑1 (MQ=255)

        gACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCg                                                                                            <  1:1008539/100‑1 (MQ=255)

        gACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCg                                                                                            <  2:210847/100‑1 (MQ=255)

         aCGGGCGGGCGCACGCCGTTTTGCTGGTGTAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGa                                                                                           <  2:246962/100‑1 (MQ=255)

              cAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTg                                                                                      >  2:96290/1‑100 (MQ=255)

              cAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTg                                                                                      >  2:93257/1‑100 (MQ=255)

                ggCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGAc                                                                                    >  2:428476/1‑100 (MQ=255)

                ggCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGAc                                                                                    >  1:800537/1‑100 (MQ=255)

                ggCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGAc                                                                                    >  1:35405/1‑100 (MQ=255)

                     aCGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTc                                                                               <  1:611566/100‑1 (MQ=255)

                      cGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCt                                                                              <  2:746329/100‑1 (MQ=255)

                          gTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATc                                                                          <  2:865426/100‑1 (MQ=255)

                           ttttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATcc                                                                         >  1:1092461‑M1/72‑100 (MQ=255)

                           ttttGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATcc                                                                         <  2:1197096/100‑1 (MQ=255)

                           ttttGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATcc                                                                         <  1:426078/100‑1 (MQ=255)

                             ttgcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctccccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGa                                                                       >  1:2346592‑M1/70‑100 (MQ=255)

                             ttGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGa                                                                       >  2:265215/1‑100 (MQ=255)

                             ttGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGa                                                                       <  2:899302/100‑1 (MQ=255)

                              tGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAc                                                                      <  1:1334238/100‑1 (MQ=255)

                              tGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAc                                                                      <  1:1204929/100‑1 (MQ=255)

                              tGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAc                                                                      <  1:757172/100‑1 (MQ=255)

                              tGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAc                                                                      <  1:756700/100‑1 (MQ=255)

                              tGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAc                                                                      <  1:2559306/100‑1 (MQ=255)

                               gcagaattgagccggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgctacccgtagGTCGGATGCGACGCTGACGCGTCTTATCCGAcc                                                                     >  2:779537‑M1/68‑100 (MQ=255)

                               gCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGAcc                                                                     >  2:1478864/1‑100 (MQ=255)

                                  ggTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCAGTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGTCGCGTCTTATTCGACCTAc                                                                  >  2:118604/1‑100 (MQ=255)

                                   gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACg                                                                 <  1:2187516/100‑1 (MQ=255)

                                   gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACg                                                                 >  2:1271725/1‑100 (MQ=255)

                                   gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACg                                                                 >  2:845036/1‑100 (MQ=255)

                                    tGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgg                                                                <  1:2631842/100‑1 (MQ=255)

                                    tGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgg                                                                >  2:1975356/1‑100 (MQ=255)

                                    tGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgg                                                                <  1:2228678/100‑1 (MQ=255)

                                    tGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgg                                                                >  1:2373813/1‑100 (MQ=255)

                                     gCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACggg                                                               <  2:1720152/100‑1 (MQ=255)

                                      cAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgggg                                                              >  1:809021/1‑100 (MQ=255)

                                       aGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGa                                                             <  2:809013/100‑1 (MQ=255)

                                        ggATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTAc                                                                  >  2:2250437/1‑94 (MQ=255)

                                        ggATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAg                                                            >  1:2397192/1‑100 (MQ=255)

                                        ggATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATACAACGCTGACGCGTCTTATCCGACCTACgaggag                                                            >  1:585167/1‑100 (MQ=255)

                                         gATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgc                                                           >  2:2651474/1‑100 (MQ=255)

                                         gATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgc                                                           <  1:428479/100‑1 (MQ=255)

                                          aTGAATGTTTTACTGACTTTTTGTATGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgcg                                                          <  1:361269/100‑1 (MQ=255)

                                           tGAAGGTTTTACTGACGTTTTGTACGTTAATTATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgc                                                           <  1:1250510/98‑1 (MQ=255)

                                           tGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgcgc                                                         <  1:585878/100‑1 (MQ=255)

                                           tGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAgcgc                                                         >  1:1969469/1‑100 (MQ=255)

                                            gAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCa                                                        >  1:2130139/1‑100 (MQ=255)

                                                 ttttACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGt                                                   <  2:2580837/100‑1 (MQ=255)

                                                  tttACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGTATGCGACGCTGACGCGTCTTATCTGACCTACGGGGAGCGCATTTGTa                                                  <  1:2250464/100‑1 (MQ=255)

                                                   ttAGTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTAGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTg                                                    <  2:1688627/97‑1 (MQ=255)

                                                   ttACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAg                                                 <  1:2267481/100‑1 (MQ=255)

                                                    tACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAgg                                                >  2:1852680/1‑100 (MQ=255)

                                                    tACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAgg                                                >  2:1673246/1‑100 (MQ=255)

                                                      cTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGcc                                              <  2:2444362/100‑1 (MQ=255)

                                                        gACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCgg                                            <  1:2221562/100‑1 (MQ=255)

                                                         aCGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTCGGCCGGa                                           >  2:2260657/1‑100 (MQ=255)

                                                          cGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGAt                                          <  2:2004236/100‑1 (MQ=255)

                                                            ttttGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATaa                                        >  1:2064372/1‑100 (MQ=255)

                                                            ttttGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATaa                                        >  1:2064379/1‑100 (MQ=255)

                                                            ttttGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATaa                                        >  2:2419473/1‑100 (MQ=255)

                                                                  aCGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGtt                                  >  2:178429/1‑100 (MQ=255)

                                                                   cGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGttt                                 <  2:2130113/100‑1 (MQ=255)

                                                                   cGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGttt                                 <  1:1036798/100‑1 (MQ=255)

                                                                   cGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGttt                                 <  1:1478878/100‑1 (MQ=255)

                                                                   cGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCCGATAAGGCGttt                                 <  1:1742040/100‑1 (MQ=255)

                                                                   cGTTAATCATTTTTCGCATCGTGGTTCGGGTGTTGTATGTTACGCTGACGCGTCTTATCCGACCTAAGGGGAGCGCATTTGTAGGCCGGATAAGGCGttt                                 <  1:118605/100‑1 (MQ=25)

                                                                    gTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGAtgcggcgtaaa                                <  1:186576/100‑11 (MQ=255)

                                                                      tAATCATTTTTCGCCTCGTGGTTGGGGTGTCGGATGCGACGCTGACGCGTCTTATCGGACCTACGGGGAGCGCATTTGTTGGCCTGATAAGGCGTTTAcg                              <  2:702944/100‑1 (MQ=21)

                                                                      tAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcg                              <  2:1655227/100‑1 (MQ=255)

                                                                      tAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGACCGGATAAGGCGTTTAcg                              >  1:532018/1‑100 (MQ=255)

                                                                       aaTCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                             >  2:319369/1‑100 (MQ=255)

                                                                       aaTCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                             >  1:429009/1‑100 (MQ=255)

                                                                       aaTCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                             >  2:568954/1‑100 (MQ=255)

                                                                       aaTCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                             >  2:566681/1‑100 (MQ=255)

                                                                         tCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgccg                           >  2:1086022/1‑100 (MQ=255)

                                                                               ttCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                     <  2:2377039/100‑1 (MQ=255)

                                                                                  gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                  >  1:2271271/1‑100 (MQ=255)

                                                                                  gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGAGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                  >  1:981479/1‑100 (MQ=255)

                                                                                   ccTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAc                 >  2:128049/1‑100 (MQ=255)

                                                                                    cTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAcc                >  1:1001666/1‑100 (MQ=255)

                                                                                    cTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCACATTTGTAAGCCGGATAAAGCGTTTACGCCGCATCCGGCAcc                >  1:314917/1‑100 (MQ=255)

                                                                                     tCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAcc                >  2:2525173/1‑99 (MQ=255)

                                                                                         ggTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTc           >  1:151988/1‑100 (MQ=255)

                                                                                            tCGGGTGTCGGATCCGACGCTGACGCGTCTTATCCGAACTACGCGGAGCGCATTTGTAGCGCGGATAAGGCGTTTACGCCGCATCCGGCCCCGGCTc           >  2:882182/1‑97 (MQ=18)

                                                                                             cGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAtt       <  1:1852697/100‑1 (MQ=255)

                                                                                             cGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAtt       <  1:1673262/100‑1 (MQ=255)

                                                                                                gtgtCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg    <  2:483576/100‑1 (MQ=255)

                                                                                                  GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGc   >  2:35405‑M1/1‑99 (MQ=255)

                                                                                                  GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa  >  1:92151‑M1/1‑100 (MQ=255)

                                                                                                  GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa  >  1:783510‑M1/1‑100 (MQ=255)

                                                                                                  GTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCa  <  1:2631536‑M1/100‑1 (MQ=255)

CGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCA  >  NC_000913/4317819‑4318016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.