New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4631582 =100 (1.030)3 (0.030) 3/168 NT 3.2% coding (850/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 4631612 = 87 (0.950)coding (880/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 118 total aligned reads displayed.

AGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAC  >  NC_000913/4631483‑4631681
                                                                                                   |                                                                                                   
gccggtgccaagcgccattcgtacacggcgttcaataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgaca                                                                                                     <  1:457653‑M1/1‑1 (MQ=255)
   gtgGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAtca                                                                                                  >  2:2332233/1‑99 (MQ=255)
   gtgGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCACAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAtcg                                                                                                  <  1:118407/100‑1 (MQ=255)
    gtgccaagcgccattcgtacacggcgttaaataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacAtcgt                                                                                                 <  2:620463‑M1/5‑1 (MQ=255)
     ggCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAtcgtc                                                                                                >  1:1988131/1‑100 (MQ=255)
           gCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTgg                                                                                          >  2:1472736/1‑100 (MQ=255)
           gCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGCCGCCTgg                                                                                          <  1:1396375/100‑1 (MQ=255)
            cAGGATGCTGAGAATGCACGGCTGATGATCCCATCTCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGATCTGCGCGATATCGTCGCCTGGc                                                                                         <  2:1540203/100‑1 (MQ=255)
            cAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGc                                                                                         <  1:431535/100‑1 (MQ=255)
            cAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGc                                                                                         >  2:1315807/1‑100 (MQ=255)
              ggATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGt                                                                                       >  1:845055/1‑100 (MQ=255)
                aTGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGttt                                                                                     >  1:1047653/1‑100 (MQ=255)
                 tGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTg                                                                                    <  2:2431023/100‑1 (MQ=255)
                   cTGAGAATGCACGGCTGATGATCCCATCGCTTGCCTAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGAt                                                                                  <  1:365097/100‑1 (MQ=255)
                   cTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGAt                                                                                  >  1:2444509/1‑100 (MQ=255)
                    tGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATg                                                                                 <  1:5971/100‑1 (MQ=255)
                    tGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATg                                                                                 <  2:1518528/100‑1 (MQ=255)
                     gagaATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATgg                                                                                <  1:1701127/100‑1 (MQ=255)
                      agaATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATggg                                                                               <  2:406521/100‑1 (MQ=255)
                          tGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAAc                                                                           >  2:2474439/1‑100 (MQ=255)
                           gCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACg                                                                          <  2:1819060/100‑1 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  2:2392272/1‑100 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  1:199726/1‑100 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  1:423678/1‑100 (MQ=255)
                              ttcaataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       >  1:810676‑M1/70‑100 (MQ=255)
                              cGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       <  1:1606092/100‑1 (MQ=255)
                              cGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       <  2:2161697/100‑1 (MQ=255)
                               tcaataagcgaagtagattgcgagcgcataatggcgtcatcgcgctatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGt                                                                      >  1:2035571‑M1/69‑100 (MQ=255)
                               ggCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       >  2:1097101/1‑99 (MQ=255)
                               ggCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGt                                                                      >  1:2489798/1‑100 (MQ=255)
                               ggCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGt                                                                      >  1:1470015/1‑100 (MQ=255)
                                gCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGt                                                                      <  2:2147026/99‑1 (MQ=255)
                                 cTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCa                                                                    <  2:853369/100‑1 (MQ=255)
                                  tgatgaTCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAc                                                                   <  1:2535282/100‑1 (MQ=255)
                                  tgatgaGCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCan                                                                   <  2:2432192/100‑2 (MQ=255)
                                  ataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAc                                                                   >  1:384850‑M1/66‑100 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  <  2:2340926/100‑1 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  >  1:422357/1‑100 (MQ=255)
                                     tgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcga                                                                >  1:2407089/1‑100 (MQ=255)
                                     tgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcga                                                                >  2:1770376/1‑100 (MQ=255)
                                     tgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcga                                                                >  1:321728/1‑100 (MQ=255)
                                       atCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgacg                                                              <  1:443425/100‑1 (MQ=255)
                                         cccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcgacg                                                              >  1:793287/1‑98 (MQ=255)
                                         cccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAg                                                            <  2:1501909/100‑1 (MQ=255)
                                         cccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTCATGGGCACCGATGTCACcgac                                                               >  2:2551502/1‑97 (MQ=255)
                                          ccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATTGTCGCCTGGCGTTTGATGGGCAACGATTTCACCGACGAg                                                            <  2:875497/99‑1 (MQ=255)
                                           cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          >  1:2223297/1‑100 (MQ=255)
                                              cGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGc                                                       >  1:1025299/1‑100 (MQ=255)
                                              cGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGc                                                       >  1:1575636/1‑100 (MQ=255)
                                               gCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                      >  1:304304/1‑100 (MQ=255)
                                               gCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                      >  1:2496303/1‑100 (MQ=255)
                                                cTTGCCCAGGCGCAGCAGCTTAATGAAGATCATATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGa                                                     <  1:275186/100‑1 (MQ=255)
                                                 ttGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGaa                                                    >  1:1930163/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 <  1:1591224/100‑1 (MQ=255)
                                                     ccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATgg                                                <  1:1097111/100‑1 (MQ=255)
                                                        ggCGCAGCAGCTTAATGAAGATCATATTCAGGAGTTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgcg                                              <  1:1172988/99‑1 (MQ=255)
                                                          cgcAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGcgcg                                            <  2:1219101/99‑1 (MQ=255)
                                                          cgcAGCAGCTTAATGAAGATCAGATACAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgcgc                                             >  2:1630997/1‑98 (MQ=255)
                                                           gcagcaGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCCACGCGCAGGCCAAATGGCGCGa                                           >  2:1067089/1‑99 (MQ=255)
                                                            cagcagCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATg                                         <  2:137172/100‑1 (MQ=255)
                                                              gcagcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGAc                                       >  2:1291796/1‑100 (MQ=255)
                                                              gcagcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGAc                                       >  2:573026/1‑100 (MQ=255)
                                                               cagcTTAATGAAGATCAGATTCAGGAGCTTCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATCTCACCGACGAGCAGGCGAAATGGCGCGATGACg                                      <  2:1594456/100‑1 (MQ=255)
                                                                agcTTAAGGAACATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGc                                     >  2:1395959/1‑100 (MQ=255)
                                                                 gcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGcc                                    >  2:2633063/1‑100 (MQ=255)
                                                                 gcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGcc                                    >  1:2268805/1‑100 (MQ=255)
                                                                  cTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCa                                   >  1:693401/1‑100 (MQ=255)
                                                                   ttccgatctaTCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCAt                                  <  1:2275057/91‑1 (MQ=255)
                                                                   ttAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCAt                                  >  2:1773022/1‑100 (MQ=255)
                                                                    tAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCAtt                                 >  2:2506700/1‑100 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGTGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              <  1:464428/100‑1 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              >  1:1974165/1‑100 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              >  2:2098109/1‑100 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              >  1:176572/1‑100 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              <  2:1284086/100‑1 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              <  2:2407059/100‑1 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGAAGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              >  1:770493/1‑100 (MQ=255)
                                                                        gAAGATCAGATTCAGGAGCTGCACGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCAATTATgc                             >  2:1535905/1‑100 (MQ=255)
                                                                          aGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATgcgc                           >  2:1966648/1‑100 (MQ=255)
                                                                           gATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCt                          >  1:2304394/1‑100 (MQ=255)
                                                                           gATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCt                          >  1:2306386/1‑100 (MQ=255)
                                                                             tCAGATTCAGGAGCTTCGCGATATCGTCGCCTTTCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                        <  1:1544109/100‑1 (MQ=255)
                                                                             tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                        >  2:1988480/1‑100 (MQ=255)
                                                                             tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                        <  1:105903/100‑1 (MQ=255)
                                                                             tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                        >  2:29097/1‑100 (MQ=255)
                                                                                  ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATc                   >  1:1133849/1‑100 (MQ=255)
                                                                                    cAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTa                 >  1:902812/1‑100 (MQ=255)
                                                                                     aGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTAc                >  1:1075084/1‑100 (MQ=255)
                                                                                      ggAGCTGCGCGATATCGTCGGCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACt               >  2:1618972/1‑100 (MQ=255)
                                                                                      ggAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGAGCGATGAAGCCATTATGCGCTAGCAATCTAc                >  1:683703/1‑99 (MQ=255)
                                                                                           tGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCt          >  1:570815/1‑100 (MQ=255)
                                                                                           tGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCt          <  2:8200/100‑1 (MQ=255)
                                                                                             cgcgATATCGTCGCCCGGCGTTTGATGGGCAAAGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCt          <  2:2589022/98‑1 (MQ=255)
                                                                                              gcgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAt       >  1:2390709/1‑100 (MQ=255)
                                                                                              gcgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAt       <  1:1472750/100‑1 (MQ=255)
                                                                                               cgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAtt      <  2:570811/100‑1 (MQ=255)
                                                                                                 atatCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGa    >  1:2145294/1‑100 (MQ=255)
                                                                                                  tatCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGaa   <  2:744971/100‑1 (MQ=255)
                                                                                                   ATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAc  <  2:289350‑M1/100‑1 (MQ=255)
                                                                                                   ATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAc  <  2:816962‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAC  >  NC_000913/4631483‑4631681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.