New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72169 =NA (NA)9 (0.100) 6/164 NT NA noncoding (34/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 411078 = NA (NA)noncoding (1/191 nt) REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 127 total aligned reads displayed.

GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT  >  NC_000913/72070‑72267
                                                                                                   |                                                                                                  
gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                    <  1:690552/100‑1 (MQ=255)
gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                    >  2:318436/1‑100 (MQ=255)
   gcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacaagttgtacgcctgacaagacgcggcaaccgccgcatcaggcCt                                                                                                   <  2:871403‑M1/2‑1 (MQ=255)
    ccGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                >  2:1669934/1‑100 (MQ=255)
    ccGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACa                                                                                                <  2:194767/100‑1 (MQ=255)
    ccGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCGACa                                                                                                >  1:2575069/1‑100 (MQ=255)
      ggTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaa                                                                                              >  1:1103383/1‑100 (MQ=255)
         gtATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACg                                                                                           <  1:1451140/100‑1 (MQ=255)
            tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                                                        <  1:907714/100‑1 (MQ=255)
            tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGACAGTCTTGTGCGGGTTGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                                                        <  2:1447569/100‑1 (MQ=255)
             atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                                                       <  1:2146578/100‑1 (MQ=255)
              tCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTa                                                                                      <  2:2220703/100‑1 (MQ=255)
              tCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTa                                                                                      >  1:330680/1‑100 (MQ=255)
               cGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAc                                                                                     >  1:1870466/1‑100 (MQ=255)
               cGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAc                                                                                     >  1:1567644/1‑100 (MQ=255)
                   atTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCAACGCTTACCGCGTCTTATCAGGCCTACAAAACGCACTACCCGt                                                                                 >  1:1633226/1‑100 (MQ=255)
                    ttttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTa                                                                                <  2:1818546/100‑1 (MQ=255)
                      tctcgtaAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGg                                                                              <  1:981454‑M1/97‑2 (MQ=255)
                        gCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtc                                                                            <  1:892381‑M1/100‑4 (MQ=255)
                         cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcg                                                                           >  1:2597858‑M1/1‑96 (MQ=255)
                         cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgaga                                                                           >  2:981444‑M1/1‑96 (MQ=255)
                            aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggat                                                                        >  1:2645461‑M1/1‑93 (MQ=255)
                            aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggat                                                                        <  1:2620193‑M1/100‑8 (MQ=255)
                             aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                       >  1:2343560/1‑100 (MQ=255)
                             aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACACTTGCCACGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                       >  1:125286/1‑100 (MQ=255)
                              aGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATaa                                                                      >  1:2321493/1‑100 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                    <  2:2597827/100‑1 (MQ=255)
                                 ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                   <  2:588724/100‑1 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                  >  1:1473034/1‑100 (MQ=255)
                                   ttGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGt                                                                 >  2:895416/1‑100 (MQ=255)
                                    tGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGtt                                                                >  2:868123/1‑100 (MQ=255)
                                     ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                               >  2:685327/1‑100 (MQ=255)
                                      gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                              >  1:948996/1‑100 (MQ=255)
                                      gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                              <  1:1333661/100‑1 (MQ=255)
                                       ggTTTAGGAGATAGTCTTGTGCGGGTGGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAc                                                             >  1:1608573/1‑100 (MQ=255)
                                        gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                            <  1:1816377/100‑1 (MQ=255)
                                          ttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgcc                                                          >  1:397588/1‑100 (MQ=255)
                                           tAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgccg                                                         >  2:578918/1‑100 (MQ=255)
                                            aGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgccgc                                                        >  2:1451726/1‑100 (MQ=255)
                                             ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgcctta                                                       <  1:1900752‑M1/100‑25 (MQ=255)
                                              gagaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCAT                                                      <  2:750780‑M2/100‑1 (MQ=255)
                                              gagaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCAT                                                      <  2:1369645‑M2/100‑1 (MQ=255)
                                               agaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGGCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatc                                                     <  2:2193426‑M1/100‑27 (MQ=255)
                                                 aTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccg                                                   <  1:1574118‑M1/100‑29 (MQ=255)
                                                  tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGA                                                  <  1:663380‑M2/100‑1 (MQ=255)
                                                   aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgac                                                 <  1:807424‑M1/100‑31 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaatgccttatccgatc                                                <  1:1800713‑M1/100‑32 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacc                                                <  1:1303751‑M1/100‑32 (MQ=255)
                                                     tCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAg                                               <  2:29688/100‑1 (MQ=255)
                                                      cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                              >  1:1123469/1‑100 (MQ=255)
                                                       ttGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTg                                             <  1:814186/100‑1 (MQ=255)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                           >  1:2509419/1‑100 (MQ=255)
                                                          tgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt                                          >  2:2388970/1‑100 (MQ=255)
                                                           gCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATa                                         <  1:139954/100‑1 (MQ=255)
                                                            cGGGTTGCCTGATGCGACGCTTGCCGCGTTTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATAc                                        <  1:685331/100‑1 (MQ=255)
                                                             gggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                       <  1:1122622/100‑1 (MQ=255)
                                                             gggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                       <  2:1551093/100‑1 (MQ=255)
                                                              ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                      >  1:2060818/1‑100 (MQ=255)
                                                               taggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTaa                                     <  2:2446509‑M1/64‑1 (MQ=255)
                                                                aggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAc                                    <  2:2312456‑M1/65‑1 (MQ=255)
                                                                aggcctgataagacgcggcaagcgtagcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAc                                    <  1:1978676‑M1/65‑1 (MQ=255)
                                                                 tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   <  1:346509/100‑1 (MQ=255)
                                                                 ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   >  2:2246943‑M1/35‑100 (MQ=255)
                                                                 ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   >  2:1327809‑M1/35‑100 (MQ=255)
                                                                 ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                   <  1:2246970‑M1/66‑1 (MQ=255)
                                                                  gcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                  <  2:204800‑M1/67‑1 (MQ=255)
                                                                  gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                  >  1:474792/1‑100 (MQ=255)
                                                                  gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                  >  1:1580195/1‑100 (MQ=255)
                                                                  gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                  >  2:742568/1‑100 (MQ=255)
                                                                   ccTTATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgtt                                 <  2:589603‑M1/100‑47 (MQ=255)
                                                                   ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                 >  2:207662/1‑100 (MQ=255)
                                                                        tGCGACGCTTGCCGCGTCTTATCAGGCCTTCAAAACGCACTATCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATc                            <  1:809446/100‑1 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                         <  2:1103373/100‑1 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                         >  2:205863/1‑100 (MQ=255)
                                                                           gACGCTTGCCGCGTCTGATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                         <  2:1548807/100‑1 (MQ=255)
                                                                            aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                        <  2:1600202/100‑1 (MQ=255)
                                                                              gCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGTATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAAt                      <  1:1304890/100‑1 (MQ=255)
                                                                              gCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAAt                      <  2:2642246/100‑1 (MQ=255)
                                                                               cTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATa                     >  1:450244/1‑100 (MQ=255)
                                                                                ttGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAg                    <  1:1156818/100‑1 (MQ=255)
                                                                                  gCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGCTAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATATTg                  >  2:1464681/1‑100 (MQ=255)
                                                                                  gCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTg                  >  2:883832/1‑100 (MQ=255)
                                                                                   ccGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGc                 >  2:1162676/1‑100 (MQ=255)
                                                                                   ccGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGc                 >  2:1995852/1‑100 (MQ=255)
                                                                                    cgcgTCTGATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAATGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGcc                <  2:950116/100‑1 (MQ=255)
                                                                                     gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg               <  2:330678/100‑1 (MQ=255)
                                                                                     gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg               <  2:1163873/100‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg            <  2:1854834/100‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg            >  2:97369/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc           >  1:2384797/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc         >  2:655099/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc         >  1:1260597/1‑100 (MQ=255)
                                                                                              caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg      <  2:2022994‑M1/95‑1 (MQ=255)
                                                                                              caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg      <  2:1204774‑M1/95‑1 (MQ=255)
                                                                                              caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg      <  1:1961518‑M1/95‑1 (MQ=255)
                                                                                               aGGCCTACAAAACGCACTACCCGTAGGTTTGTTAATGTGTTTTTGTCGTATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc     <  1:706246/100‑1 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc    >  2:1260585‑M1/4‑100 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc    >  2:1123459‑M1/4‑100 (MQ=255)
                                                                                                 gcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc    >  1:2651598‑M1/3‑99 (MQ=255)
                                                                                                  cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt  <  1:1767630‑M1/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTT  >  NC_000913/72070‑72267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.