BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2430980	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (52/84 nt)	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 2431012	NA (NA)	4 (0.040)	3/164	NT	NA	noncoding (84/84 nt)	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 113 total aligned reads displayed.

ATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACT  >  NC_000913/2430881‑2431077

atTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAg                                                                                                   >  2:2068070/1‑100 (MQ=255)

atTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAg                                                                                                   >  2:1097068/1‑100 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcc                                                                                                >  2:2294713‑M1/1‑97 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcc                                                                                                <  1:1719276‑M1/100‑4 (MQ=255)

     aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctg                                                                                              <  2:1806763‑M1/100‑6 (MQ=255)

     aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctg                                                                                              >  1:718361‑M1/1‑95 (MQ=255)

     aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctg                                                                                              >  1:2602840‑M1/1‑95 (MQ=255)

     aCGCCATCGACTTTTTATGCCTTTGCGGCAACGAGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctg                                                                                              >  2:1740811‑M1/1‑95 (MQ=255)

        ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATa                                                                                           <  2:1226410/100‑1 (MQ=255)

        ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATa                                                                                           <  2:230786/100‑1 (MQ=255)

         cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATaa                                                                                          >  1:644573/1‑100 (MQ=255)

          accGACTTTTTATGCCTTTCCCGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCCACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAg                                                                                         <  2:1580667/98‑1 (MQ=37)

             gACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CTCCTGCGTAGGCCTGATAAGAcg                                                                                      >  1:1595100/1‑100 (MQ=255)

             gACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGAcg                                                                                      >  1:2382177/1‑100 (MQ=255)

             gACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGAcg                                                                                      >  1:2366934/1‑100 (MQ=255)

              aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGAcgc                                                                                     >  2:928900/1‑100 (MQ=255)

                 ttttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGcc                                                                                  <  2:900015/100‑1 (MQ=255)

                  tttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCa                                                                                 >  2:1511401/1‑100 (MQ=255)

                  tttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCa                                                                                 >  1:2568015/1‑100 (MQ=255)

                     aTGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGc                                                                               >  1:1905770/1‑99 (MQ=255)

                       gCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTc                                                                            >  2:40032/1‑100 (MQ=255)

                        ccTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           >  2:1929455/1‑100 (MQ=255)

                         cTTTGCGGCATCGGGCAATGCGTGTCGGATGCTGCGTAAACGCCTTATCCGCCCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  1:2635922/99‑1 (MQ=255)

                         cTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGc                                                                          >  1:510155/1‑100 (MQ=255)

                         cTTTCCGGCATCGTGCAATGCGTGTCGGATGCGGCGTAAACCCCTTATCCTACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  2:787858/99‑1 (MQ=37)

                          tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTT‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCA                                                                         >  2:1410183‑M2/1‑100 (MQ=255)

                          tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCA                                                                         >  2:2382147‑M2/1‑100 (MQ=255)

                          tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCA                                                                         >  2:2366904‑M2/1‑100 (MQ=255)

                           ttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGTCTTATCCGACCTACGGTTCTA‑CCACTGCGTAGgcctgatgcgacgctggcgcgtcttat                                                                        <  1:252130‑M1/100‑28 (MQ=255)

                             gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCA                                                                      >  1:768440‑M2/1‑100 (MQ=255)

                               ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGG                                                                    >  1:2266954‑M2/1‑100 (MQ=255)

                                gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC                                                                   <  2:2324273‑M2/100‑1 (MQ=255)

                                gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC                                                                   <  1:838124‑M2/100‑1 (MQ=255)

                                 cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCATAAAACTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                  >  1:2377469/1‑100 (MQ=37)

                                   tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggccta                                                                <  2:11995‑M1/100‑36 (MQ=255)

                                      ggCAATGCGTGTCGGGTGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAcc                                                             <  1:823156/100‑1 (MQ=255)

                                      ggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                              >  2:1790094/1‑99 (MQ=255)

                                           tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctacgcagggg                                                        <  1:1097078‑M1/100‑44 (MQ=255)

                                           tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctacgcagggg                                                        <  1:1071221‑M1/100‑44 (MQ=255)

                                           tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                        <  2:81192/100‑1 (MQ=255)

                                               tgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAtt                                                    >  1:642616/1‑100 (MQ=255)

                                               tgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAtt                                                    >  1:642544/1‑100 (MQ=255)

                                               tgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑ACCCTGCGTAGGTCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACGGTATTagt                                                     >  2:1807674/1‑97 (MQ=21)

                                                gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                   >  1:1450209/1‑100 (MQ=255)

                                                gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                   >  2:2583696/1‑100 (MQ=255)

                                                gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                   >  2:73109/1‑100 (MQ=255)

                                                  cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                 <  2:2470126/100‑1 (MQ=255)

                                                  cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                 <  1:1251506/100‑1 (MQ=255)

                                                      tGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                             <  2:2069778/100‑1 (MQ=255)

                                                        cggcgTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                           <  2:2451316/100‑1 (MQ=255)

                                                        cggcgTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCATCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                           >  1:1186759/1‑100 (MQ=255)

                                                         ggcgTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                          >  1:2146943/1‑100 (MQ=255)

                                                         ggcgTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTACGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                          >  2:1417609/1‑100 (MQ=255)

                                                           cgTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGcc                                        >  2:1747501/1‑100 (MQ=255)

                                                             tAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCa                                      >  1:275135/1‑100 (MQ=255)

                                                               aaCGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCAtt                                    <  2:1480080/100‑1 (MQ=255)

                                                                aCGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTa                                   <  2:560151/100‑1 (MQ=255)

                                                                 cGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAc                                  >  1:2442294/1‑100 (MQ=255)

                                                                 cGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAc                                  >  2:2208953/1‑100 (MQ=255)

                                                                     ttATCCGACCTACTGTTCTA‑CCCCTGCGTAGGTCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                              <  1:1101463/100‑1 (MQ=255)

                                                                     ttATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                               <  1:2603454/99‑1 (MQ=255)

                                                                      tATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGc                             >  1:2533618/1‑100 (MQ=255)

                                                                      tATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCAGCAGGCAATACCGTATTAATTCGGCGTATAGCCCATTACCACGc                             <  2:365592/100‑1 (MQ=255)

                                                                       aTCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGAGGCGCCAGCGTCGCATCAGGCAATACCGTATTAATTCGGCGTATAGCCCATTACCACGcc                            >  2:217570/1‑100 (MQ=255)

                                                                       aTCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGcc                            >  2:1833582/1‑100 (MQ=255)

                                                                       aTCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGcc                            <  2:2306694/100‑1 (MQ=255)

                                                                       aTCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGcc                            <  2:1468389/100‑1 (MQ=255)

                                                                        tCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCa                           <  2:2488976/100‑1 (MQ=255)

                                                                         ccGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCTTATAGCCCATTACCACGCCAc                          <  2:2398298/100‑1 (MQ=255)

                                                                         ccGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCAc                          <  1:1951034/100‑1 (MQ=255)

                                                                          cGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCTGCGTATAGCCCATTACCACGCCACt                         <  2:2391963/100‑1 (MQ=255)

                                                                          cGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACt                         >  2:1251083/1‑100 (MQ=255)

                                                                           gagctgccgTTCTA‑CCCCGGCGGAGTCCTGATAAGACGCTCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACt                         <  2:867958/91‑1 (MQ=37)

                                                                           gACCTACGTTTCTA‑CCCCTGCGTAGGCCTTATAAGACTCGCCAGCGTCGCATCAGGCAATACCGTATTAATTCGTCTTATAGCCCATTACCACGCCACt                         <  2:867295/99‑1 (MQ=37)

                                                                           gACCTACGGTTCTACCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCAATTACCACGCAACt                         >  2:1523741/1‑100 (MQ=37)

                                                                           gACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACtt                        <  2:2428638/100‑1 (MQ=255)

                                                                              cTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                     >  1:2522879/1‑100 (MQ=255)

                                                                               tACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                    >  2:299363/1‑100 (MQ=255)

                                                                               tACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                    >  2:1910952/1‑100 (MQ=255)

                                                                                  ggTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGcc                   <  1:128231/98‑1 (MQ=255)

                                                                                  ggTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                 >  2:1208653/1‑100 (MQ=255)

                                                                                    ttCTA‑CCCCTGCGTACGCCTAATAAGACGCGCCAGCGTCGCATCATGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGGCACTTAAg                     <  2:1877637/94‑1 (MQ=38)

                                                                                     tCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGaaa              >  2:211674/1‑100 (MQ=255)

                                                                                       tA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGt            <  2:2184101/100‑1 (MQ=255)

                                                                                       tA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGt            >  2:1943445/1‑100 (MQ=255)

                                                                                          ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgca          <  1:1071221‑M2/100‑58 (MQ=255)

                                                                                          ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgca          <  1:1097078‑M2/100‑58 (MQ=255)

                                                                                          ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATAAAGCAAAACCGTATTAATTCGGCGCATAGCCTATTAGCACGCCACTTAAGCCAGAAAGtt           >  2:1634895/1‑99 (MQ=37)

                                                                                            ccTGCGTATGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCTGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCt        <  2:1751969/100‑1 (MQ=255)

                                                                                            ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCt        <  1:723671/100‑1 (MQ=255)

                                                                                             cTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCtt       >  1:998266/1‑100 (MQ=255)

                                                                                              tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc      <  1:201360/100‑1 (MQ=255)

                                                                                               gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCa     <  2:1186748/100‑1 (MQ=255)

                                                                                               gCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCa     <  2:1891029/100‑1 (MQ=255)

                                                                                                 gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc   <  2:580964/100‑1 (MQ=255)

                                                                                                 gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc   <  2:644569/100‑1 (MQ=255)

                                                                                                 gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc   <  1:254400/100‑1 (MQ=255)

                                                                                                 gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc   <  1:2650107/100‑1 (MQ=255)

                                                                                                  tAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcattgcccga  <  2:11995‑M2/100‑66 (MQ=255)

                                                                                                  tAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACt  <  2:2599047/100‑1 (MQ=255)

ATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTA‑CCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACT  >  NC_000913/2430881‑2431077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.