New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4266888 =NA (NA)4 (0.040) 3/164 NT NA noncoding (1/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4266918 = NA (NA)noncoding (31/97 nt) RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP318 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 118 total aligned reads displayed.

TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017
                                                                                                   |                                                                                                   
taCGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     <  1:2498729/100‑1 (MQ=255)
ccgccagatgcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTATCCGGcc                                                                                                     >  1:2650456‑M1/70‑100 (MQ=255)
    cgcCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATa                                                                                                 >  1:2573685/1‑100 (MQ=255)
      gaggcacgacctttataagagcatgaaagaacatcaacttattgaatttttaggattttattgGCCGGATGCGGCGTGAATGCCTTGTCCGGCCAATaaa                                                                                               >  1:1762331‑M1/64‑100 (MQ=255)
      ccTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaa                                                                                               >  2:1977354/1‑100 (MQ=255)
      ccTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATaaa                                                                                               >  1:1284075/1‑100 (MQ=255)
        tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                                                             >  1:1481287/1‑100 (MQ=255)
        tGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAAt                                                                                             >  1:649808/1‑100 (MQ=255)
         gACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATc                                                                                            >  2:2325881/1‑100 (MQ=255)
          aCTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATcc                                                                                           <  2:2130142/100‑1 (MQ=255)
              cAAGGGTCGCGATGAAATACGTGGATTATTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaa                                                                                       <  1:2383381/100‑1 (MQ=255)
              cAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaa                                                                                       >  2:803217/1‑100 (MQ=255)
              cAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaa                                                                                       <  2:582912/100‑1 (MQ=255)
              cAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTaaa                                                                                       >  2:1655555/1‑100 (MQ=255)
                   gTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTc                                                                                  <  1:67343/100‑1 (MQ=255)
                   gTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTc                                                                                  >  2:1908050/1‑100 (MQ=255)
                    tCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCa                                                                                 <  2:1046202/100‑1 (MQ=255)
                     cgcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCaa                                                                                <  1:2777/100‑1 (MQ=255)
                      gcgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAAt                                                                               <  1:1250550/100‑1 (MQ=255)
                      gcgATGAAATACGTGGATTAATCAATCTGTAATATTTGATTGTCTGTGCAGGATGTGGCGTGAATTCGAGATCCGGCCAATAGAATCCTAAAAATACaa                                                                                >  2:117604/1‑99 (MQ=255)
                       cgATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATa                                                                              <  2:592946/100‑1 (MQ=255)
                               tACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGAt                                                                       <  2:318438/99‑1 (MQ=255)
                               tACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATg                                                                      <  1:1717727/100‑1 (MQ=255)
                                aCGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGt                                                                     <  2:1463983/100‑1 (MQ=255)
                                   tGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCt                                                                  >  1:2204218/1‑100 (MQ=255)
                                      aTTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTc                                                               >  2:1702049/1‑100 (MQ=255)
                                       ttAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCa                                                              <  2:1982962/100‑1 (MQ=255)
                                        tAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCAt                                                             >  2:739512/1‑100 (MQ=255)
                                        tAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCAt                                                             <  1:2558058/100‑1 (MQ=255)
                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            >  1:465847/1‑100 (MQ=255)
                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            >  1:1405945/1‑100 (MQ=255)
                                         aaTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATg                                                            <  2:1158966/100‑1 (MQ=255)
                                          aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                                                           <  1:1946463/100‑1 (MQ=255)
                                          aTCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGc                                                           >  2:1122591/1‑100 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  1:1553423/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  2:1006792/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  2:649804/100‑1 (MQ=255)
                                             gTTCTGTAATATTTGATTGTCTGTGCAGGATGCGGCGTGAATGCCTTATACGGCCAATAAAATCCTAAAACTTTCATAAGTTGATGTTCTTTCATActct                                                        >  2:1120573/1‑100 (MQ=38)
                                              ttCTTTAATATTTGATTGTCTGTGCCGGATGCGGCGTTAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCtt                                                       <  1:908360/100‑1 (MQ=255)
                                               tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGctct                                                        <  1:496343/98‑1 (MQ=255)
                                               tCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTta                                                      <  1:1092565/100‑1 (MQ=255)
                                                cTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtat                                                     >  1:1481029/1‑100 (MQ=255)
                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    >  1:42222/1‑100 (MQ=255)
                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    <  1:1625425/100‑1 (MQ=255)
                                                 tGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTtata                                                    <  1:2536360/100‑1 (MQ=255)
                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   <  1:1951653/100‑1 (MQ=255)
                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   >  1:1331689/1‑100 (MQ=255)
                                                  gTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATaa                                                   >  1:1384539/1‑100 (MQ=255)
                                                     atatTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAgg                                                <  1:2567629/100‑1 (MQ=255)
                                                       atTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTc                                              >  1:2212792/1‑100 (MQ=255)
                                                       atTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTAATGTTCTTTCATGCTCTTATAAAGGTc                                              >  1:636561/1‑100 (MQ=255)
                                                         ttGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGt                                            >  2:1057135/1‑100 (MQ=255)
                                                          tGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTACGCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTGCTTTCATGCTCTTATAAAAGTc                                              <  2:544097/97‑1 (MQ=38)
                                                            aTTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGcc                                         <  1:178524/100‑1 (MQ=255)
                                                              tttattggccggacaaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc                                       >  1:1762331‑M2/38‑100 (MQ=255)
                                                              tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctc                                       <  2:379961/100‑1 (MQ=255)
                                                              tGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTATTTCATGCTCTTATAAAGGTCGTGCct                                        >  2:407130/1‑99 (MQ=255)
                                                               gTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCctct                                      >  2:325896/1‑100 (MQ=255)
                                                                tCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTg                                     >  2:708261/1‑100 (MQ=255)
                                                                tCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTg                                     >  2:1369777/1‑100 (MQ=255)
                                                                tCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTg                                     <  1:2444526/100‑1 (MQ=255)
                                                                  tgtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGc                                   <  1:1992344/100‑1 (MQ=255)
                                                                   gtgCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg                                  <  2:1658520/100‑1 (MQ=255)
                                                                    ggccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCATCTGGCgg                                 >  1:2650456‑M2/32‑100 (MQ=255)
                                                                     gccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa                                >  1:528453‑M2/31‑100 (MQ=255)
                                                                     gccggataaggcattcacgccgcatccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa                                >  1:2657939‑M2/31‑100 (MQ=255)
                                                                     GCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCg                                  <  2:1310766‑M1/98‑1 (MQ=255)
                                                                     GCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGa                                <  1:971002‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATg                              >  1:739519‑M1/1‑100 (MQ=255)
                                                                        GGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCgg                                 >  2:856142‑M1/1‑96 (MQ=255)
                                                                         GATGAGGCGTGAATGCCTTATCCGGCCGATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTGATGCTCTTATAAAGGTCGTGCCTCTGGCGGATg                              >  2:1592565‑M1/1‑98 (MQ=255)
                                                                           TGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATCAAGGTCGTGCCTCTGGCGGATGTACg                          >  1:1615271‑M1/1‑100 (MQ=255)
                                                                             cggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGtt                        >  1:411168/1‑100 (MQ=255)
                                                                             cggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGtt                        >  1:238233/1‑100 (MQ=255)
                                                                             cggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGtt                        >  2:2271878/1‑100 (MQ=255)
                                                                              ggcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGttt                       >  2:1946264/1‑100 (MQ=255)
                                                                               gcgTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTg                      <  1:2325910/100‑1 (MQ=255)
                                                                                  tGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCa                   <  2:60465/100‑1 (MQ=255)
                                                                                   gAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCAt                  >  1:2642813/1‑100 (MQ=255)
                                                                                    aaTGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 <  2:1481273/100‑1 (MQ=255)
                                                                                    aaTGCCTTATCCGGACAATAAAATCATAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATg                 <  2:119906/100‑1 (MQ=255)
                                                                                     aTGCCTTCTCCGGCCAATAAAATACTAAAAATTCACTAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCCTGCCTCTGGCGGATGTACGTTTGTCATg                 >  2:2281679/1‑99 (MQ=255)
                                                                                      tGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAg               >  1:1329187/1‑100 (MQ=255)
                                                                                       gCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTCTAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGt              >  2:467723/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtc             >  2:164742/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGATCGTGACTCTGGCGGATGTACGTTTGTCATGAGtc             >  1:2188566/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCAATAAAATCCTAAAAATTTAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGtct            <  1:803225/100‑1 (MQ=255)
                                                                                              ccggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActc       <  2:818394‑M2/95‑1 (MQ=255)
                                                                                               cggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActct      >  1:2298039‑M2/5‑100 (MQ=255)
                                                                                               cggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCActct      >  2:1060725‑M2/5‑100 (MQ=255)
                                                                                                ggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTg     >  1:2272722‑M2/4‑100 (MQ=255)
                                                                                                ggcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTg     <  2:413097‑M2/97‑1 (MQ=255)
                                                                                                 gcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGTGGATGTACGTTTGTCATGAGTCTCACTCTGt    <  1:1783408‑M2/98‑1 (MQ=255)
                                                                                                 gcCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGt    <  2:1405931‑M2/98‑1 (MQ=255)
                                                                                                  cCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGtt   >  2:1868552‑M2/2‑100 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATTCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  1:801582/100‑1 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGtt   <  2:2212765/99‑1 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  2:1125643/100‑1 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  2:1153466/100‑1 (MQ=255)
                                                                                                   cAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTg  <  2:2429844/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAATCGTTCTGTAATATTTGATTGTCTGTGCCGGATGCGGCGTGAATGCCTTATCCGGCCAATAAAATCCTAAAAATTCAATAAGTTGATGTTCTTTCATGCTCTTATAAAGGTCGTGCCTCTGGCGGATGTACGTTTGTCATGAGTCTCACTCTGTTG  >  NC_000913/4266819‑4267017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.