BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4631875	94 (0.960)	3 (0.030)	3/166	NT	3.4%	coding (1143/1938 nt)	slt	lytic murein transglycosylase, soluble
*	?	NC_000913	= 4631889	82 (0.900)	3 (0.030)	3/166	NT	3.4%	coding (1157/1938 nt)	slt	lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 108 total aligned reads displayed.

GGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAT  >  NC_000913/4631791‑4631988

ggATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGc                                                                                                    >  2:1025289‑M2/1‑99 (MQ=255)

  aTTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcat                                                                                                  <  1:147827‑M2/100‑4 (MQ=255)

   tttATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatc                                                                                                 >  2:2319269‑M2/1‑96 (MQ=255)

     tATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcgg                                                                                               >  1:465849‑M2/1‑94 (MQ=255)

      aTTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGc                                                                                              <  2:2253492/100‑1 (MQ=255)

       ttGCTGGAACGCGGACGTGAAGTTTATTCAAAATAGATTTTGTATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                                             <  1:1067099/100‑1 (MQ=255)

       ttGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                                             >  2:1295847/1‑100 (MQ=255)

       ttGCTGGAACGCGGACATGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCg                                                                                             >  1:1771544/1‑100 (MQ=255)

         gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  2:416987/1‑100 (MQ=255)

         gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  2:655417/1‑100 (MQ=255)

         gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  1:1924123/1‑100 (MQ=255)

         gCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  1:1556450/1‑100 (MQ=255)

           tGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAaga                                                                                         >  2:2054733/1‑100 (MQ=255)

            ggAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGaa                                                                                           >  1:593432/1‑97 (MQ=255)

            ggAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                                        <  2:2618078/100‑1 (MQ=255)

            ggAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAagag                                                                                        <  1:289352/100‑1 (MQ=255)

                cgcgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTAt                                                                                     <  1:992254/99‑1 (MQ=255)

                  cgGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAg                                                                                  <  2:1332191/100‑1 (MQ=255)

                   ggACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGc                                                                                 <  2:123628/100‑1 (MQ=255)

                         gaagctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGa                                                                           >  2:1125657/1‑100 (MQ=255)

                            gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGTAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGAtt                                                                         >  2:2143042/1‑99 (MQ=255)

                            gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTg                                                                        >  1:1474702/1‑100 (MQ=255)

                            gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTg                                                                        >  2:2144077/1‑100 (MQ=255)

                            gctgaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTg                                                                        <  2:1930145/100‑1 (MQ=255)

                               gaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGAtc                                                                     <  2:2496273/100‑2 (MQ=255)

                               gaagcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATa                                                                     <  1:643853/100‑1 (MQ=255)

                                  gcAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAg                                                                  >  1:2507337/1‑100 (MQ=255)

                                   cAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgc                                                                 >  2:2520154/1‑100 (MQ=255)

                                    aaaaGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAgcg                                                                <  2:321726/100‑1 (MQ=255)

                                       agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                                             >  2:1882522/1‑100 (MQ=255)

                                       agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                                             <  2:2390679/100‑1 (MQ=255)

                                       agagATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGcgccg                                                             <  1:1272491/100‑1 (MQ=255)

                                          gaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAg                                                          >  1:2584503/1‑100 (MQ=255)

                                          gaTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAg                                                          <  1:2054755/100‑1 (MQ=255)

                                          gaTTTTGCATCAACTAATGCAACAGCGTGGTTTCTACCCGATGGATGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCa                                                           >  2:606888/1‑99 (MQ=255)

                                           aTTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGCTGGTTGCAGCACAACACATCGGCGAAGAGTATAAACTGAAGATTGATAAAGCGCCGCAGa                                                         >  1:1360395/1‑100 (MQ=255)

                                              ttGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATg                                                      >  2:2031199/1‑100 (MQ=255)

                                                gCATCAAGTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGtt                                                    >  1:1395543/1‑100 (MQ=255)

                                                gCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGtt                                                    >  2:1883821/1‑100 (MQ=255)

                                                 cttCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   <  2:1608292/98‑1 (MQ=255)

                                                 cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   >  1:40367/1‑100 (MQ=255)

                                                 cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   <  1:2587257/100‑1 (MQ=255)

                                                 cATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTg                                                   <  2:2210631/100‑1 (MQ=255)

                                                 cATCAACTCATGCAACAACGAGGTTTCTACACGATGGTTGCACCACAACGCATCGGCAAAGAGTATTAGCTGAATATTGATAAAGCGCCGCAGa                                                         >  2:2254006/1‑94 (MQ=255)

                                                  aTCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGa                                                  >  1:144893/1‑100 (MQ=255)

                                                    cAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACa                                                <  2:2607585/100‑1 (MQ=255)

                                                     aaCTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACATCGCATCGGCGAAGAGTATGAGCTGAAGATTAATAAAGCGCCGCAGAATGTTAACa                                                >  1:975699/1‑99 (MQ=255)

                                                     aaCTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAg                                               <  2:888877/100‑1 (MQ=255)

                                                     aaCTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGACGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAg                                               >  1:8404/1‑100 (MQ=255)

                                                       cTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAgcg                                             >  2:1007014/1‑100 (MQ=255)

                                                         cATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagct                                           <  1:2225773‑M2/100‑59 (MQ=255)

                                                         cATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGcc                                           >  1:2197262/1‑100 (MQ=255)

                                                          aTGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGccc                                          >  2:1161751/1‑100 (MQ=255)

                                                           tGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                                         >  1:1140224/1‑100 (MQ=255)

                                                           tGCAACAGCGTGGTGTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCt                                         <  2:838429/100‑1 (MQ=255)

                                                            gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                                        >  2:588373/1‑100 (MQ=255)

                                                            gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                                        <  2:1896086/100‑1 (MQ=255)

                                                            gCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTg                                        >  1:756496/1‑100 (MQ=255)

                                                             cAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGa                                       >  1:202277/1‑100 (MQ=255)

                                                             cAACAGCGTGGTTTCTACCCGATGGTTACAGCACAACGCATCGGCGAAGAGGATGAGCTGAAGATTGATAAAGCGCCGCAGACTGTTGACAGCGCCATg                                        >  2:1186818/1‑99 (MQ=255)

                                                              aaCAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGAc                                      <  1:2387185/100‑1 (MQ=255)

                                                                 aGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCa                                   <  1:2544649/100‑1 (MQ=255)

                                                                  gCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAg                                  <  2:593428/100‑1 (MQ=255)

                                                                   cGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAgg                                 <  2:932724/100‑1 (MQ=255)

                                                                     tGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAgggg                               >  2:1529690/1‑100 (MQ=255)

                                                                        tttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCg                            >  2:1724928/1‑100 (MQ=255)

                                                                        tttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCg                            >  2:2054425/1‑100 (MQ=255)

                                                                        tttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCACTGACTCAGGGGCCg                            >  1:1236120/1‑100 (MQ=255)

                                                                         ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCgg                           <  2:1172937/100‑1 (MQ=255)

                                                                         ttCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCg                            >  2:459075/1‑99 (MQ=255)

                                                                          tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga                          >  2:1944898/1‑100 (MQ=255)

                                                                          tCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGga                          <  2:2507598/100‑1 (MQ=255)

                                                                           cTACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagc                         <  1:1988499‑M2/100‑77 (MQ=255)

                                                                           cTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgag                         >  2:1625837/1‑100 (MQ=255)

                                                                            tACCCGATGGTTGCAGCACAACGcatcgggtagaaaccacgctgttgcatgagttgatgcaaaatctcttttgcttcagcttcacgtccgcgttccagca                        <  1:1187544‑M2/100‑78 (MQ=255)

                                                                            tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga                        >  1:317116/1‑100 (MQ=255)

                                                                            tACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGgaga                        <  1:316204/100‑1 (MQ=255)

                                                                             aCCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGAt                       >  1:2131347/1‑100 (MQ=255)

                                                                              cccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATg                      >  2:1994310/1‑100 (MQ=255)

                                                                              cccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGAATCAGGGGCCGGAGATg                      >  1:1632145/1‑100 (MQ=255)

                                                                               ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     <  1:655421/100‑1 (MQ=255)

                                                                               ccGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATgg                     >  2:1616622/1‑100 (MQ=255)

                                                                                 gATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGgcg                   <  2:2592919/100‑1 (MQ=255)

                                                                                     gTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGcgcgcg               >  1:2649714/1‑100 (MQ=255)

                                                                                       tGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTg             <  1:2579706/100‑1 (MQ=255)

                                                                                       tGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTg             <  1:1396999/100‑1 (MQ=255)

                                                                                         cagcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTgcg           <  2:756489/100‑1 (MQ=255)

                                                                                         cagcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTgcg           >  2:711617/1‑100 (MQ=255)

                                                                                           gcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGcgcg         <  2:1556434/100‑1 (MQ=255)

                                                                                           gcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGcgcg         <  1:798606/100‑1 (MQ=255)

                                                                                           gcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGcgcg         >  1:1711036/1‑100 (MQ=255)

                                                                                           gcaCAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGcgcg         <  1:1825064/100‑1 (MQ=255)

                                                                                             acaACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAg       <  1:1161761/100‑1 (MQ=255)

                                                                                               aaCGTATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGTAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGtt     <  1:706489/100‑1 (MQ=255)

                                                                                               aaCGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGtt     >  2:692386/1‑100 (MQ=255)

                                                                                               aaCGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGtt     <  1:363478/100‑1 (MQ=255)

                                                                                                aCGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTg    <  2:1217914/100‑1 (MQ=255)

                                                                                                 cGCATCGGCGAAGGGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACTGCGCCCTGACTCAGGGGCCGGAGATGGTGCGCGGGCGCGAGTTGa   <  2:600253/100‑1 (MQ=255)

                                                                                                  gCATCGGCGAAGAGTATGAGCTGAAGATTGATAACGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAt  <  2:1395529/100‑1 (MQ=255)

                                                                                                  gCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAt  <  1:1921307/100‑1 (MQ=255)

GGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGAT  >  NC_000913/4631791‑4631988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.