New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 361887 =NA (NA)5 (0.060) 6/164 NT NA noncoding (5/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 361917 = NA (NA)intergenic (‑57/+9) lacA/lacY thiogalactoside acetyltransferase/lactose permease

Only 100 of 121 total aligned reads displayed.

TAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361819‑362015
                                                                                                  |                                                                                                  
cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacat                                                                                                   <  2:451866‑M2/2‑1 (MQ=255)
cgcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacat                                                                                                   <  2:384010‑M2/2‑1 (MQ=255)
 gcttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACatt                                                                                                  >  1:1023524‑M1/68‑100 (MQ=255)
  cttagcggccccggcccgctttccctgctgcgtcgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                                 >  2:1952682‑M1/67‑100 (MQ=255)
   cTTGCCTGCTCTTTTTCTTTCGGTCATTTGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGTATAAGGCGCTCGCTCCGCATCCGACattga                                                                                                >  2:328560/1‑100 (MQ=255)
     tGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgatt                                                                                              >  1:954698/1‑100 (MQ=255)
      gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             <  1:1698728/100‑1 (MQ=255)
       ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTTCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             >  2:1766783/1‑99 (MQ=255)
       ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                            >  2:203726/1‑100 (MQ=255)
        cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                           >  2:2403385/1‑100 (MQ=255)
        cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                           <  2:1951504/100‑1 (MQ=255)
          gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                         >  2:466300/1‑100 (MQ=255)
           ctctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTaa                                                                                        >  1:782216/1‑100 (MQ=255)
            tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAg                                                                                       >  2:2187044/1‑100 (MQ=255)
            tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAg                                                                                       <  2:2205816/100‑1 (MQ=255)
             ctTATTCTTTCGGTCATTGGCATGTTCAACGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGc                                                                                      >  2:1317375/1‑100 (MQ=255)
               tATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGa                                                                                    >  2:1264303/1‑100 (MQ=255)
                aTTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAc                                                                                   >  1:798481/1‑100 (MQ=255)
                aTTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGAc                                                                                   <  2:1719197/100‑1 (MQ=255)
                   cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                >  1:976883/1‑100 (MQ=255)
                   cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                <  1:300397/100‑1 (MQ=255)
                   cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                >  1:1688109/1‑100 (MQ=255)
                   cTTTCCGTCATTGGCATGTTCAATGCTATCGCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACtt                                                                                 <  2:590336/99‑1 (MQ=255)
                      tCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcatt                                                                             >  2:192193/1‑100 (MQ=255)
                       cttccgatctcATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattc                                                                            <  1:440610/90‑1 (MQ=255)
                       cGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATCGATTGCTTAAGCGACttcattc                                                                            <  2:1539683/100‑1 (MQ=255)
                         gTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAc                                                                          >  1:746634/1‑100 (MQ=255)
                         gTCATTGGAATGTTCAATGCGATCACTCCGTTATGATATGTTTTTCGGATAAGGCGCTCGCGCCGCAGCCGACATTGATTGCTTAAGCGACttcattca                                                                           <  1:69765/99‑1 (MQ=39)
                          tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                         <  1:820930/100‑1 (MQ=255)
                          tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                         <  1:1046750/100‑1 (MQ=255)
                            aTTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTg                                                                       <  2:1138482/100‑1 (MQ=255)
                             ttGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGAAATTGATTGCTTAAGCGACTTCATTCACCTga                                                                      >  1:1562295/1‑100 (MQ=255)
                               ggCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                    >  2:384415/1‑100 (MQ=255)
                               gcgtcgtcaggtgaatgaagtcgcttaagcaatcaatgtcggataaggcgctcgcgccgcatccgacATTGATTGCTTAAGCGACTTCATTCACCTgacg                                                                    <  2:659868‑M2/33‑1 (MQ=255)
                                 cATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattcagatcggaag                                                                  >  2:440606/1‑91 (MQ=255)
                                   cgtcaggtgaatgaagtcgcttaagcaatcaatGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgc                                                                <  2:659868‑M1/67‑1 (MQ=255)
                                    gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacagatcg                                                               >  2:640291/1‑94 (MQ=255)
                                    gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                               <  1:1910973/100‑1 (MQ=255)
                                      tCAATGCGATCACTCCGTTATGATATGTTGGTAGAATAATGCCCCCGCGCCGCATCCGAAATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                             >  2:938069/1‑100 (MQ=255)
                                       cAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagca                                                            >  2:1505160/1‑100 (MQ=255)
                                         aTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAgg                                                          <  1:142059/100‑1 (MQ=255)
                                         aTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAgg                                                          <  1:1096892/100‑1 (MQ=255)
                                         aTGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAgg                                                          <  1:2048227/100‑1 (MQ=255)
                                          tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                         <  1:1264315/100‑1 (MQ=255)
                                            cGATCACTCCGTTATGATATGTTAGTCGGATAAGGCGCTCAAGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                         <  1:1149766/98‑1 (MQ=255)
                                                 aCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                                                  >  2:799297/1‑100 (MQ=255)
                                                  cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 >  2:1980746/1‑100 (MQ=255)
                                                   tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                <  1:1620142/100‑1 (MQ=255)
                                                   tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                <  1:1045082/100‑1 (MQ=255)
                                                        tATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                           <  1:696050/100‑1 (MQ=255)
                                                        ccgatcttGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccgggg                                           <  2:85119/93‑1 (MQ=255)
                                                          tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                         <  1:290320/100‑1 (MQ=255)
                                                            atatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGc                                       <  2:1778302/100‑1 (MQ=255)
                                                              atGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTa                                     <  1:384417/100‑1 (MQ=255)
                                                               tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggagatcgg                                    >  1:85120/1‑93 (MQ=255)
                                                               tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                    >  1:766644/1‑100 (MQ=255)
                                                                gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAg                                   >  2:2189018/1‑100 (MQ=255)
                                                                caatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAg                                   >  2:1952682‑M2/35‑100 (MQ=255)
                                                                 ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                  >  2:387387/1‑100 (MQ=255)
                                                                 ttGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttcc                                  <  1:1766800/100‑5 (MQ=38)
                                                                 aatgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                  >  1:1023524‑M2/34‑100 (MQ=255)
                                                                  tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  1:371724/1‑100 (MQ=255)
                                                                  atgtcggatgcggcgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  1:374102‑M2/33‑100 (MQ=255)
                                                                  atGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 <  2:384010‑M1/98‑1 (MQ=255)
                                                                  atGTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 <  2:451866‑M1/98‑1 (MQ=255)
                                                                   ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                                >  1:241154/1‑100 (MQ=255)
                                                                   ggTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                                >  1:763306/1‑100 (MQ=255)
                                                                    gTCGGATAAGGCGCTCGCGCCGAATCTGACATTGATTGTTTAAGCGACTTCATTCATCTGACGACTCAGCAGGGAAAGAGGGCCGGGGCCGCTGAGc                                  >  2:924695/1‑97 (MQ=38)
                                                                    GTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGt                                <  2:2221721‑M1/99‑1 (MQ=255)
                                                                    GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               <  2:1823635‑M1/100‑1 (MQ=255)
                                                                    GTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               >  2:2076217‑M1/1‑100 (MQ=255)
                                                                     TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                              >  1:2403415‑M1/1‑100 (MQ=255)
                                                                     TCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAACTGACAACGCAGCAAGGAAAGAGGGCCGGGGCCGCTAAGCGTg                               <  1:851929‑M1/99‑1 (MQ=255)
                                                                      CGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                             >  1:1006911‑M1/1‑100 (MQ=255)
                                                                       GGATAAGGCGCTCGCGCCGCATCCGATATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                             >  1:434120‑M1/1‑99 (MQ=255)
                                                                       GGATAAGGAGCTCGCGCCGCAGCCGACATTGATTGCTTAAGCGACTTCAGTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                            >  2:2135665‑M1/1‑100 (MQ=255)
                                                                        GATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAaca                           <  1:612604‑M1/100‑1 (MQ=255)
                                                                        GATAAGGCGCTCGCGCCACATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAaca                           <  2:1488470‑M1/100‑1 (MQ=255)
                                                                          TAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                         >  1:2081872‑M1/1‑100 (MQ=255)
                                                                            aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                       >  2:2226108/1‑100 (MQ=255)
                                                                              gcgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaaa                     <  2:1245127/100‑1 (MQ=255)
                                                                               cgcgagcgccttatccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                    <  1:659872‑M2/81‑1 (MQ=255)
                                                                                gcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAtt                   >  1:2007913/1‑100 (MQ=255)
                                                                                 cTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTa                  >  1:2645864/1‑100 (MQ=255)
                                                                                    gctccgcATCCGACATTGATTGCTTAAGCGATTTCATTCACCTGACGACGCAGGAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               <  1:2076461/97‑1 (MQ=255)
                                                                                    gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGAGGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               <  2:2302524/100‑1 (MQ=255)
                                                                                    gcgcCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGCCGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAgg               >  2:1316617/1‑100 (MQ=255)
                                                                                      gccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAGCACGGAAATTAAGGTg             >  2:1547858/1‑100 (MQ=255)
                                                                                      gccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGACCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTg             >  1:1172363/1‑100 (MQ=255)
                                                                                       ccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGa            >  2:2038009/1‑100 (MQ=255)
                                                                                        cgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGaa           <  2:1709950/100‑1 (MQ=255)
                                                                                         gcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGATTACGCAGCAGGGAAAGCGGGCCGGGTCTGCTAAGCGTGAACACGGAAATTAAGGTGa            <  2:2534321/98‑1 (MQ=255)
                                                                                             ccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa      >  2:1524669‑M2/6‑100 (MQ=255)
                                                                                             ccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa      >  2:2411517‑M2/6‑100 (MQ=255)
                                                                                             ccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa      >  2:1001084‑M2/6‑100 (MQ=255)
                                                                                             ccgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGAAAATTAAGGTGAAGCCCa      >  1:1851101‑M2/6‑100 (MQ=255)
                                                                                              cgacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAg     >  2:449464‑M2/5‑100 (MQ=255)
                                                                                               gacATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgc    >  1:307042‑M2/4‑100 (MQ=255)
                                                                                                acATTGATTGCTTAAGCGACTTCATTCACCTGACTACGCAGTAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg   <  1:2256480‑M2/98‑1 (MQ=255)
                                                                                                 cATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcgc  >  2:92105‑M2/2‑100 (MQ=255)
                                                                                                  |                                                                                                  
TAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361819‑362015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.