New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)7 (0.080) 4/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 117 total aligned reads displayed.

GGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG  >  NC_000913/792198‑792395
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ggTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGC                                                                                                    >  1:2283103‑M2/1‑100 (MQ=255)
 gTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGC                                                                                                    >  1:1854222‑M2/1‑99 (MQ=255)
       gaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                                             <  1:698091/100‑1 (MQ=255)
         atgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGc                                                                                           <  2:995828/100‑1 (MQ=255)
          tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                          <  1:1347182/100‑1 (MQ=255)
          tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                          <  2:2010770/100‑1 (MQ=255)
             ttGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTTGCCGGAGAGGATGCTAAGGCCGCCTCCGGCAAGGTCAGCACTa                                                                                       >  1:575646/1‑100 (MQ=255)
              ttcttttttttttTGTAAAAAGACGTGTGTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                                                      <  1:572686/95‑1 (MQ=255)
                cgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCg                                                                                    <  1:843093/100‑1 (MQ=255)
                  cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                                                  >  2:556186/1‑100 (MQ=255)
                     tttATCTGAAAAAAGACGCGGTTTCATGGCTGCATGTTTCGAACCGTTGGTCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCa                                                                               <  1:116149/100‑1 (MQ=255)
                      ttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCaa                                                                              <  2:31039/100‑1 (MQ=255)
                          cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCCAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatata                                                                          <  2:1451255/100‑1 (MQ=255)
                           tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  1:94849/1‑100 (MQ=255)
                           tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  1:1900477/1‑100 (MQ=255)
                           tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGAGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  1:142529/1‑100 (MQ=255)
                            gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                        >  1:142982/1‑100 (MQ=255)
                            gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                        >  2:1429494/1‑100 (MQ=255)
                            gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                        >  2:270242/1‑100 (MQ=255)
                             aaaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAttt                                                                       <  2:1638091/100‑1 (MQ=255)
                              aaaaaGACGCGGTTTTATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                      <  1:2606948/100‑1 (MQ=255)
                              aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                      <  1:1991199/100‑1 (MQ=255)
                              aaaaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                      >  2:816059/1‑100 (MQ=255)
                              aaaaaGACGCGGTTTCATGCCTGCATGCGGCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCACCTCCGGCAAGGTCAGCACTACCGACTCAATATAtttt                                                                      <  2:1983775/100‑1 (MQ=255)
                                ctaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                    <  2:1538060/98‑1 (MQ=255)
                                aaaGACGCGTTTTCATGCCTGCATGCGTCGAACCGTTGGCCGTAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                    <  2:2378241/100‑1 (MQ=255)
                                aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                    <  2:2102865/100‑1 (MQ=255)
                                  aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTgag                                                                  >  1:1538075/1‑98 (MQ=255)
                                  aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTc                                                                  <  2:1492850/100‑1 (MQ=255)
                                  aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTc                                                                  <  2:1403192/100‑1 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                 <  2:2461200/100‑1 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                 >  2:2209616/1‑100 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                 <  2:1715902/100‑1 (MQ=255)
                                   gACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                 <  1:190146/100‑1 (MQ=255)
                                     cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCa                                                                 <  2:1748125/98‑1 (MQ=255)
                                      gcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGca                                                              <  1:1537917/100‑1 (MQ=255)
                                         gTTTCATGCCTGCATGCGTCGAACCGTTGGCCGTAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACAt                                                           >  1:545823/1‑100 (MQ=255)
                                         gTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGAGCTAAGGCCGCCTCCGGCAAGGTCAGCACTCCCCACTCAATATATTTGTGTCAGCACAt                                                           >  2:2072828/1‑100 (MQ=255)
                                             cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGc                                                        >  2:2038155/1‑99 (MQ=255)
                                             cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                                                       >  1:1924953/1‑100 (MQ=255)
                                             cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCg                                                       >  2:859939/1‑100 (MQ=255)
                                              aTGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAACATATTTTTGTCAGCACATAGCGa                                                      >  2:2023251/1‑100 (MQ=255)
                                                 ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATag                                                   >  2:2473955/1‑100 (MQ=255)
                                                   tGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagag                                                 <  2:1901750/100‑1 (MQ=255)
                                                     cATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                                               >  1:69241/1‑100 (MQ=255)
                                                        gCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAc                                            <  2:1893800/100‑1 (MQ=255)
                                                         cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCACCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc                                           >  2:1410219/1‑100 (MQ=255)
                                                          gTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCg                                          >  2:1253909/1‑100 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       <  2:260530/100‑1 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       >  1:2565123/1‑100 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       <  1:2212541/100‑1 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       >  1:2262083/1‑100 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       >  1:2138488/1‑100 (MQ=255)
                                                             gAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTAAGCACATAGCGATAGAGTCCACCGTcc                                       >  1:2138599/1‑100 (MQ=255)
                                                              aaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTcc                                       <  1:543131/99‑1 (MQ=255)
                                                              aaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg                                      <  2:212750/100‑1 (MQ=255)
                                                                ccGTTGGCCGGAGAGGGTGCTACGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTAGTCAGCACATAGCGATAGAGTCCACAGTCCGGc                                    >  2:1535041/1‑100 (MQ=255)
                                                                ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc                                    <  1:1734766/100‑1 (MQ=255)
                                                                ccGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc                                    >  1:2062312/1‑100 (MQ=255)
                                                                  gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcata                                  <  1:18365‑M2/100‑67 (MQ=255)
                                                                  gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcata                                  <  2:359312‑M2/100‑67 (MQ=255)
                                                                   ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg                                 <  1:981980/100‑1 (MQ=255)
                                                                   ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg                                 <  1:644869/100‑1 (MQ=255)
                                                                   ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg                                 <  2:964378/100‑1 (MQ=255)
                                                                   ttGGCCGGAGAGGGTGCTAAGGCCGCCTCCCGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACg                                 <  2:2201895/100‑1 (MQ=255)
                                                                    tGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaa                                <  1:1941668‑M2/100‑69 (MQ=255)
                                                                     ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaac                               <  1:236378‑M2/100‑70 (MQ=255)
                                                                     ggCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGaa                               >  2:1559663/1‑100 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaacc                              <  2:1733010‑M2/100‑71 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaacc                              <  1:77496‑M2/100‑71 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaacc                              <  1:2638789‑M2/100‑71 (MQ=255)
                                                                      gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAAc                              >  1:964247/1‑100 (MQ=255)
                                                                        cGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTc                            >  1:1471844/1‑100 (MQ=255)
                                                                           agagGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAg                         <  1:1710193/100‑1 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                      >  1:2025757/1‑100 (MQ=255)
                                                                              gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                      >  2:1254303/1‑100 (MQ=255)
                                                                                 tGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGATTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATg                   <  2:1526266/100‑1 (MQ=255)
                                                                                 tGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATg                   <  1:514038/100‑1 (MQ=255)
                                                                                 tGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATg                   <  1:614750/100‑1 (MQ=255)
                                                                                 tGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATg                   >  2:2391160/1‑100 (MQ=255)
                                                                                  gCTAAGGTCGCATCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATgg                  >  2:1385998/1‑100 (MQ=255)
                                                                                     agggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCAGGCACGAACTCAAGACGATGGGTa               >  1:1789193/3‑100 (MQ=255)
                                                                                     aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa               >  1:1884541/1‑100 (MQ=255)
                                                                                     aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa               >  2:463377/1‑100 (MQ=255)
                                                                                     aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa               >  1:1951864/1‑100 (MQ=255)
                                                                                         ncgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAc           >  2:1495219/2‑100 (MQ=255)
                                                                                         ccgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAc           >  1:969315/1‑100 (MQ=255)
                                                                                           gccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcag         >  2:19350/1‑100 (MQ=255)
                                                                                             cTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGTACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggc       <  1:688642/100‑1 (MQ=255)
                                                                                              tCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcg      <  1:1422740‑M2/100‑95 (MQ=255)
                                                                                               ccGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgc     <  1:2206154‑M2/100‑96 (MQ=255)
                                                                                                cGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcg    <  1:2165920‑M2/100‑97 (MQ=255)
                                                                                                 ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCATATAGCGATAGAGTCCACCGTCCGGCCCGAACTCAAGACGATGGGTAATAcaggcagg    >  2:2319453/1‑99 (MQ=255)
                                                                                                 ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACaggcaggc   >  2:554791/1‑100 (MQ=255)
                                                                                                 ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACaggcaggc   <  1:1576520/100‑1 (MQ=255)
                                                                                                  gCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgca  <  2:2608823‑M2/100‑99 (MQ=255)
                                                                                                  gCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGgcg  <  1:2002463/100‑1 (MQ=255)
                                                                                                  gCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGgcg  >  1:1566065/1‑100 (MQ=255)
                                                                                                  gCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGgcg  <  1:569965/100‑1 (MQ=255)
                                                                                                   cAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTACACCGTCCGGCACGAACTCAAGACGACGGGTAATACAGGCAGgcg  >  2:659705/1‑99 (MQ=255)
                                                                                                   |                                                                                                  
GGTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG  >  NC_000913/792198‑792395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.