| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2002048 | NA (NA) | 6 (0.070) | 3/164 | NT | NA | noncoding (81/99 nt) | RIP141 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP141 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 2002059 | NA (NA) | noncoding (92/99 nt) | RIP141 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP141 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 112 total aligned reads displayed.
TTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCTTTT > NC_000913/2001960‑2002158 | tttATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAagcgcagcgc < 2:235208/100‑1 (MQ=255) aTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatc < 1:953887‑M2/100‑4 (MQ=255) aTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatc > 2:804098‑M2/1‑97 (MQ=255) tGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatca > 1:1154278‑M2/1‑96 (MQ=255) tGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatca > 2:2289950‑M2/1‑96 (MQ=255) tGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatca > 1:189567‑M2/1‑96 (MQ=255) gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatcag > 1:2411466‑M2/1‑95 (MQ=255) gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatcag > 2:2338496‑M2/1‑95 (MQ=255) gTTGCCGGATGCGGCGTAAAAGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAAATTGTAGGCCTGATAAGCGCAGCGCatcag < 2:374347‑M2/100‑6 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatcaggc > 1:1945783‑M2/1‑93 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatcaggc > 1:2653468‑M2/1‑93 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCatcaggc > 1:2653338‑M2/1‑93 (MQ=255) gATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAttt < 2:2469417/100‑1 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTTAATAAATTGCAATTCAACTTGTAGGCCTGAGAAGCGCAGCGCATCAGGCAATTTGGCGt < 1:811245/100‑1 (MQ=255) ggcgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGt < 1:2395398/100‑1 (MQ=255) cgTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTg < 2:2280617/100‑1 (MQ=255) aaaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCg < 1:1031096/100‑1 (MQ=255) aaaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCg > 1:57129/1‑100 (MQ=255) aaaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCg > 2:309703/1‑100 (MQ=255) aaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGCTAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGt > 2:2507837/1‑100 (MQ=255) aaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGt > 2:2100465/1‑100 (MQ=255) aaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGt > 1:2088908/1‑100 (MQ=255) aaCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGACCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGt > 1:699483/1‑100 (MQ=255) aCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTc < 1:2012966/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTc < 2:627915/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTc < 1:2568444/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTc < 1:1267270/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAg < 2:2484616/100‑1 (MQ=255) gCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAg < 1:309705/100‑1 (MQ=255) ccTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGt > 2:1097524/1‑100 (MQ=255) ccTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGt > 1:1847061/1‑100 (MQ=255) ccTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGt > 2:279549/1‑100 (MQ=255) cTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGtc < 1:1144941/100‑1 (MQ=255) tATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGtctc > 2:1485277/1‑100 (MQ=255) tATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGtctc < 1:1410678/100‑1 (MQ=255) aTCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCa < 2:768865/100‑1 (MQ=255) tCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAg < 1:1891728/100‑1 (MQ=255) cGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGt < 1:2467907/99‑1 (MQ=255) cGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCACATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGtt > 1:880780/1‑100 (MQ=255) cTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATc > 2:590834/1‑100 (MQ=255) cTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGAT‑‑GCGCTGCGCttatcaggcctacaagttgaattgcaatttattgaatttg > 1:179610‑M2/1‑60 (MQ=255) tACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCa > 1:188020/1‑100 (MQ=255) tACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCa > 2:1205210/1‑100 (MQ=255) tACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCa > 2:1635860/1‑100 (MQ=255) cAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAgg > 2:2144993/1‑100 (MQ=255) aaaaTGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGtt < 1:1348078/100‑1 (MQ=255) gtgCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAAc < 2:317432/100‑1 (MQ=255) tgCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACg > 2:590531/1‑100 (MQ=255) gCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGa > 2:2615503/1‑100 (MQ=255) gCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGa > 1:1304834/1‑100 (MQ=255) gCAAATTCAATAAATTGCAATTAAACTTGTAGGCCTGATAAGCGCAACGCATCAGGCAATTTCGCGTTGCCGTAATTCTACGTTAATCAGGTTACAAc > 2:1236885/1‑98 (MQ=21) cAAATTCAATAAATTGCAATTAAACTTGTAGGCCTGATAAGAGCAGGGCATCAGGAAATTTGGCGTTGCTGTCAGTTTCAGTTAATCAGGTTACAActa > 2:1728043/1‑97 (MQ=25) aaaTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGAtt < 2:1552346/100‑1 (MQ=255) aaaTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGAtt > 1:2200458/1‑100 (MQ=255) aaaTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCACAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGAt > 2:2612184/1‑99 (MQ=255) aaTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTa < 2:2367339/100‑1 (MQ=255) aaTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTa > 1:1753518/1‑100 (MQ=255) aTTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTaa > 1:2040095/1‑100 (MQ=255) tCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAAcc < 2:2282859/100‑1 (MQ=255) tCAATAAATTACAATTCAACTTGTAGCCCGGATAATCACAGCGCATCAGGCAATTTGCCGCATCCGGCAGACTCAGTTAATCACGTTACAACCATTAAcc < 2:1081064/100‑1 (MQ=19) cAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAAccc < 2:1793878/100‑1 (MQ=255) aTAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTg < 1:67473/100‑1 (MQ=255) tAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgc < 1:1340385/100‑1 (MQ=255) tAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgc < 1:1484345/100‑1 (MQ=255) aaaTTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgca > 1:915377/1‑100 (MQ=255) aaTTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcag < 2:1459784/100‑1 (MQ=255) aTTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagc > 1:2480452/1‑100 (MQ=255) ttGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagca > 1:2330892/1‑100 (MQ=255) ttGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagca < 2:2097589/100‑1 (MQ=255) ttGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagca < 2:1304821/100‑1 (MQ=255) ttGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTgcagca < 1:1205222/100‑1 (MQ=255) aaTTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAgaga > 1:2231641/1‑100 (MQ=255) aTTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGAc < 2:2132885/100‑1 (MQ=255) aTTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGAc > 2:2226850/1‑100 (MQ=255) ttCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACa < 1:351707/100‑1 (MQ=255) ttCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACa > 1:1408465/1‑100 (MQ=255) tCAACTTGTAGGCCTGATAAACGCAGAGAAACAGGCAATTTGGCGATGACGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAg > 2:221657/1‑100 (MQ=38) aaCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGAGTTGCCGTCAGTCTCAGTTAATCAGGTTACACAGATTAACCCTGAAGCAGAGACAGaa < 2:1544561/100‑1 (MQ=37) aCTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAAc < 1:2226877/100‑1 (MQ=255) cTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAAcc < 2:1297253/100‑1 (MQ=255) gTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAGCGATTAACCCTGCAGCAGAGACAGAACctgc > 1:2641804/1‑100 (MQ=255) ggCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACctgc < 2:641641/97‑1 (MQ=255) ggCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCtgctgc < 2:2088885/100‑1 (MQ=255) ggCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCtgctgc < 1:1988807/100‑1 (MQ=255) gCCTGATAAGCGCAGCGCatcaggcctacaagttgaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggca < 2:152509‑M2/100‑83 (MQ=255) gCCTGATAAGCGCAGCGCatcaggcctacaagttgaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggca < 2:2651696‑M2/100‑83 (MQ=255) ccTGATAAGCGCAGCGCatcaggcctacaagttgaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaa < 1:1781631‑M2/100‑84 (MQ=255) ccTGATAAGCGCAGCGCatcaggcctacaagttgaattgcaatttattgaatttgcacatttttgtaggccggataaggcgtttacgccgcatccggcaa < 1:14068‑M2/100‑84 (MQ=255) ccTGATAAGCGCAGCGCatcaggcctacaagttgaattgcaatttattgaatttgcacatttttgtagcccgaataaagcgtatacgcaacatccgacaa < 1:1818433‑M2/100‑84 (MQ=255) agcgcagcgcATGAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTgg > 1:1743213/1‑100 (MQ=255) gcgcagcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGGAGAGACAGAACCTGCTGCGGTACCTGGt < 1:768457/100‑1 (MQ=255) gcagcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTa < 2:1086478/100‑1 (MQ=255) cagcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAg > 2:1504973/1‑100 (MQ=255) agcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTa < 2:2575337/98‑1 (MQ=255) agcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTAAGATAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACATGCTGAGGTACCTGGTTAg < 2:776178/99‑1 (MQ=255) gcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCt < 1:1712782/100‑1 (MQ=255) gcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCt < 2:1374905/100‑1 (MQ=255) gcgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCt < 1:1281190/100‑1 (MQ=255) cgcaTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCtt < 2:2231614/100‑1 (MQ=255) caTCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCtttt < 2:643279/100‑1 (MQ=255) | TTTATGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGCAATTCAACTTGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTGGCGTTGCCGTCAGTCTCAGTTAATCAGGTTACAACGATTAACCCTGCAGCAGAGACAGAACCTGCTGCGGTACCTGGTTAGCTTTT > NC_000913/2001960‑2002158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |