New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2729452	NA (NA)	7 (0.080)	4/158	NT	NA	intergenic (‑8/+164)	gltW/rrsG	tRNA‑Glu/16S ribosomal RNA of rrnG operon
	?	NC_000913	= 2729474	NA (NA)					intergenic (‑30/+142)	gltW/rrsG	tRNA‑Glu/16S ribosomal RNA of rrnG operon

CCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCA  >  NC_000913/2729394‑2729572                                                                                 |                                                                                                   ccggTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACCAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGc                                                                                 <  2:1475324/97‑1 (MQ=0)          gctgTGAAAGGGCGGTGTCCTGGGCCTCTATACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCAtt                                                                          <  1:1083281/95‑1 (MQ=0)                                        gatgAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAg                                           <  2:863071/96‑1 (MQ=1)                                                                     cgcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTa             <  1:1612333/100‑1 (MQ=11)                                                                     cgcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTa             <  1:1986178/100‑1 (MQ=11)                                                                      gcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAt            <  2:974091/100‑1 (MQ=31)                                                                      gcgTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTAt            >  2:2013181/1‑100 (MQ=31)                                                                         ttGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCa         <  1:38239/100‑1 (MQ=32)                                                                         ttGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCGCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTc          <  1:2110783/99‑1 (MQ=17)                                                                          tGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCAc        <  1:2297103/100‑1 (MQ=33)                                                                          tGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCAc        <  1:2448586/100‑1 (MQ=33)                                                                            cGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCATCACTCCCAACGCGTAAACGCCTTGCTATTCACt       >  1:1342933/1‑99 (MQ=18)                                                                             gTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACttt     >  2:1745287/1‑100 (MQ=33)                                                                             gTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACttt     >  1:947799/1‑100 (MQ=33)                                                                              tGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtttt    >  2:2598954/1‑100 (MQ=35)                                                                              tGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtttt    <  1:839732/100‑1 (MQ=35)                                                                               gATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtc   >  2:1201089/1‑100 (MQ=35)                                                                               gATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtc   <  1:1697705/100‑1 (MQ=35)                                                                                atatTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtca  <  2:2402345/100‑1 (MQ=38)                                                                                 |                                                                                                   CCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCA  >  NC_000913/2729394‑2729572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.