| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 95.6% | 326.4 / 9.1 | 91 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (47/40); total (49/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑C‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑g < 2:1106683/100‑1 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc < 2:2358953/100‑1 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑gatcg > 1:221696/1‑96 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑c > 2:374262/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑c < 2:1181829/100‑1 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑cc < 2:228216/100‑2 (MQ=255) ccTTTTATTGTGCACAGAAAAGCCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑cctg > 1:1674581/1‑97 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCC‑G‑c‑cc‑cc > 1:333615/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑cctgc > 1:948335/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑cctgc > 1:1599340/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c‑cc‑cctgc > 2:2864138/1‑95 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGc > 1:2832404/1‑100 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGc < 1:753443/99‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCa < 1:2884839/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCa < 2:663776/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCa > 1:1204202/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAg < 2:1117441/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAg < 1:1426541/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAg < 2:961097/100‑1 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGAt > 1:562989/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTcg > 1:2507302/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTcg > 1:274408/1‑100 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTcgcg > 2:930679/1‑100 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCa > 2:1663313/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGgcgc < 2:1015320/100‑1 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGgcgc < 1:2808814/100‑1 (MQ=255) tCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCa < 2:569533/100‑1 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 2:2324178/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 2:469950/1‑100 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCGGGATTTCGCGCAAACGGCGCAGGcc < 2:2596873/100‑1 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:2446391/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 1:2169415/1‑100 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 1:2305354/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑C‑CC‑CGTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 1:1550646/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 1:2056080/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 2:2117347/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 1:1382536/100‑1 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 2:477083/100‑1 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTCACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa > 1:2053299/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTCACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 2:2053316/100‑1 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 2:591169/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt < 1:54997/99‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:2273420/100‑1 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:1012539/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGTGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:1085769/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 1:719230/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:374260/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 2:1133905/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa > 2:1455411/1‑100 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 2:289354/100‑1 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 1:38509/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 1:1135394/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:2358422/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 1:301557/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:1090027/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:2618532/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:1883944/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:2627628/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:2820527/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:2864491/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg > 2:2481260/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 1:261058/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:719232/100‑1 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac > 2:2364333/1‑100 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 1:96912/1‑100 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 2:2264399/100‑1 (MQ=255) ttacttacTCGCGGAACAGCGCTTCGATATTCA‑G‑C‑CCAC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGtt > 1:1541376/1‑100 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg > 2:2660581/1‑100 (MQ=255) actCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg > 2:132047/1‑100 (MQ=255) actCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:899848/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 1:444711/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg > 1:2262982/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:489428/1‑100 (MQ=255) gcgGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACTGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg > 2:806176/1‑100 (MQ=255) gcgGAACAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg > 1:1964550/1‑100 (MQ=255) aaCAGCGCTTCGATATTCAGG‑C‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCa > 1:1769137/1‑100 (MQ=255) caacgcTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 1:1681431/4‑100 (MQ=255) cAGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 1:1215402/1‑100 (MQ=255) aGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACTGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 1:806173/100‑1 (MQ=255) aGCGCTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt < 1:2660557/100‑1 (MQ=255) gcTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:1599352/100‑1 (MQ=255) gcTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:1227972/100‑1 (MQ=255) gcTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:135268/100‑1 (MQ=255) cTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:489426/100‑1 (MQ=255) cTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:2421230/1‑100 (MQ=255) cTTCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:2046973/1‑100 (MQ=255) tCGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 2:1976851/1‑100 (MQ=255) tCGATATTCA‑G‑CGCC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCTTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACgn < 2:1580001/100‑2 (MQ=255) cGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 2:1674593/100‑1 (MQ=255) cGATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:2517737/100‑1 (MQ=255) gATATTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:139887/1‑100 (MQ=255) atatTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt > 2:988893/1‑100 (MQ=255) atatTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 2:261059/100‑1 (MQ=255) tatTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 2:888087/1‑100 (MQ=255) atTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 1:1751490/1‑100 (MQ=255) atTCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc > 1:966784/1‑100 (MQ=255) ttCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:2689072/100‑1 (MQ=255) ttCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:2484773/100‑1 (MQ=255) ttCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:1839344/1‑100 (MQ=255) ttCA‑GCC‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:1883958/100‑1 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑C‑CC‑C‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |