Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,493,095 T→C V209A (GTG→GCG)  trg → methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,493,0950TC95.3% 366.1 / 2.9 107V209A (GTG→GCG) trgmethyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
Reads supporting (aligned to +/- strand):  ref base T (2/3);  new base C (45/57);  total (47/60)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 108 total aligned reads displayed.

AAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCG  >  NC_000913/1492998‑1493190
                                                                                                 |                                                                                               
aaaGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTgcgc                                                                                               <  2:1241618/100‑1 (MQ=255)
  aGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCtt                                                                                             <  2:458487/100‑1 (MQ=255)
    ccGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGc                                                                                           <  2:840138/100‑1 (MQ=255)
    ccGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGc                                                                                           >  2:2004818/1‑100 (MQ=255)
    ccGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGc                                                                                           >  2:1520166/1‑100 (MQ=255)
       ttAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGccgt                                                                                        >  2:1492652/1‑98 (MQ=255)
       ttAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCt                                                                                        >  2:1740393/1‑100 (MQ=255)
       ttAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCt                                                                                        <  2:1350396/100‑1 (MQ=255)
        tAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTg                                                                                       >  2:574180/1‑100 (MQ=255)
         aaGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTgg                                                                                      <  2:1920845/100‑1 (MQ=255)
         aaGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTgg                                                                                      <  2:742815/100‑1 (MQ=255)
           gATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTc                                                                                    >  1:601956/1‑100 (MQ=255)
           gATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTc                                                                                    >  1:1995013/1‑100 (MQ=255)
           gATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTc                                                                                    <  2:1870129/100‑1 (MQ=255)
             tACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCAt                                                                                  >  1:277863/1‑100 (MQ=255)
              aCGTAGCACCAGAGCCAACCAACTGGCGGAACTGGTCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATg                                                                                 <  1:2504604/100‑1 (MQ=255)
              aCGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATg                                                                                 <  2:2501705/100‑1 (MQ=255)
               cGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGa                                                                                >  1:2646577/1‑100 (MQ=255)
               cGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGa                                                                                <  2:1818660/100‑1 (MQ=255)
                gTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGAc                                                                               <  2:1878698/100‑1 (MQ=255)
                gTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGAc                                                                               <  2:1864246/100‑1 (MQ=255)
                gTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGAc                                                                               >  1:113481/1‑100 (MQ=255)
                 tAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACg                                                                              <  1:951739/100‑1 (MQ=255)
                   gCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCt                                                                            >  2:2122912/1‑100 (MQ=255)
                   ctaCCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCt                                                                            <  1:1196272/98‑1 (MQ=255)
                     aCCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCtag                                                                          >  2:1196277/1‑98 (MQ=255)
                     aCCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGa                                                                          <  1:1159845/100‑1 (MQ=255)
                      ccAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGAt                                                                         <  1:110935/100‑1 (MQ=255)
                       cAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATa                                                                        <  2:2498305/100‑1 (MQ=255)
                        agagCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATaa                                                                       >  1:1114527/1‑100 (MQ=255)
                        agagCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATaa                                                                       >  2:2290797/1‑100 (MQ=255)
                        agagCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATaa                                                                       >  2:842084/1‑100 (MQ=255)
                         gagCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAAc                                                                      >  2:1435143/1‑100 (MQ=255)
                          agCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACa                                                                     <  2:1155537/100‑1 (MQ=255)
                           gCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACa                                                                     <  1:2317902/99‑1 (MQ=255)
                             caaccaacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACAttt                                                                  >  2:759304/1‑100 (MQ=255)
                              aaccaacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTa                                                                 >  2:2149390/1‑100 (MQ=255)
                               accaacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTAt                                                                <  1:1795073/100‑1 (MQ=255)
                               accaacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTAt                                                                >  2:2212308/1‑100 (MQ=255)
                                ccaacTGGCGGAACTGGCCCATCAGCGCACCCGGCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATg                                                               <  2:840719/100‑1 (MQ=255)
                                ccaacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATg                                                               <  2:2554003/100‑1 (MQ=255)
                                 caacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATgg                                                              >  1:486868/1‑100 (MQ=255)
                                  aacTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGt                                                             >  2:1815148/1‑100 (MQ=255)
                                   acTGGCGGAACTCGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTg                                                            <  1:775660/100‑1 (MQ=255)
                                    cTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGc                                                           <  2:1064247/100‑1 (MQ=255)
                                    cTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGc                                                           <  1:2802839/100‑1 (MQ=255)
                                      ggCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTa                                                         >  1:1835561/1‑100 (MQ=255)
                                        cGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACg                                                       >  1:567435/1‑100 (MQ=255)
                                        cGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACg                                                       >  2:1306620/1‑100 (MQ=255)
                                        cGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACg                                                       >  1:2042518/1‑100 (MQ=255)
                                         ggAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGt                                                      >  2:143752/1‑100 (MQ=255)
                                           aaCTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCg                                                    <  1:1495118/100‑1 (MQ=255)
                                           aaCTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCg                                                    <  2:812185/100‑1 (MQ=255)
                                               ggCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATc                                                >  2:2340923/1‑100 (MQ=255)
                                               ggCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATc                                                >  1:2170779/1‑100 (MQ=255)
                                                gCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCg                                               >  1:1380002/1‑100 (MQ=255)
                                                 cccATCAGCGCACCCGCCTGGGTGGGATGTGCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCg                                               <  2:2490589/99‑1 (MQ=255)
                                                  ccATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTc                                             >  2:1301894/1‑100 (MQ=255)
                                                   cATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGt                                              >  1:1431170/1‑98 (MQ=255)
                                                     tCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTGTGCTCTGGCCCTGGTCATGACGCTGATAACAGGTATTGTGCTTCGTCGGATCGTCagg                                          <  1:1294004/100‑3 (MQ=255)
                                                       aGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCg                                        <  2:445271/100‑1 (MQ=255)
                                                            aCCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCAc                                   >  2:1511619/1‑100 (MQ=255)
                                                             cccGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACt                                  >  1:529777/1‑100 (MQ=255)
                                                                 ccTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCaa                              <  2:797993/100‑1 (MQ=255)
                                                                 ccTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCaa                              >  2:2148322/1‑100 (MQ=255)
                                                                  cTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAAc                             <  1:2290779/100‑1 (MQ=255)
                                                                  cTGGGTGGGATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAAc                             <  1:842081/100‑1 (MQ=255)
                                                                   tgggtgggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACa                            <  2:2646601/100‑1 (MQ=255)
                                                                      gtgggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGc                         <  1:2148304/100‑1 (MQ=255)
                                                                      gtgggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGc                         >  1:122935/1‑100 (MQ=255)
                                                                       tgggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGcc                        <  2:379461/100‑1 (MQ=255)
                                                                       tgggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGcc                        <  2:88547/100‑1 (MQ=255)
                                                                         ggATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCga                      >  1:1912123/1‑99 (MQ=255)
                                                                         ggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGc                      <  2:567437/100‑1 (MQ=255)
                                                                         ggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGc                      <  1:2122894/100‑1 (MQ=255)
                                                                         ggATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGc                      >  2:2864832/1‑100 (MQ=255)
                                                                          gATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGca                     >  2:204199/1‑100 (MQ=255)
                                                                          gATGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGca                     <  1:78165/100‑1 (MQ=255)
                                                                           aTGTTCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGcac                    <  1:2725208/100‑1 (MQ=255)
                                                                               tCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACg                >  2:879529/1‑100 (MQ=255)
                                                                               tCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACg                >  2:941993/1‑100 (MQ=255)
                                                                               tCATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACg                <  2:2870315/100‑1 (MQ=255)
                                                                                cATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACgg               >  2:2656463/1‑100 (MQ=255)
                                                                                cATGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACgg               <  1:156819/100‑1 (MQ=255)
                                                                                 aTGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGa              >  1:839544/1‑100 (MQ=255)
                                                                                  tGATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGAt             <  2:486870/100‑1 (MQ=255)
                                                                                   gATTGGCGCTTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGAtt            <  1:1911196/100‑1 (MQ=255)
                                                                                   gATTGGCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGAtt            <  2:569365/100‑1 (MQ=255)
                                                                                    aTTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTg           <  2:1114532/100‑1 (MQ=255)
                                                                                       ggCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGaaa        <  1:136391/100‑1 (MQ=255)
                                                                                       ggCGCGTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGaaa        <  1:1740381/100‑1 (MQ=255)
                                                                                        gcgcGGTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGaa         >  1:933106/1‑98 (MQ=255)
                                                                                         cgcgTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGaaaaa      >  2:1672463/1‑100 (MQ=255)
                                                                                         cgcgTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGaaa        <  1:137442/98‑1 (MQ=255)
                                                                                           cgTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAAt    >  2:75217/1‑100 (MQ=255)
                                                                                           cgTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAAt    <  2:669660/100‑1 (MQ=255)
                                                                                           cgTTTGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAAt    <  1:1435133/100‑1 (MQ=255)
                                                                                             tttGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCg  <  2:1553331/100‑1 (MQ=255)
                                                                                             tttGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCg  <  2:2540273/100‑1 (MQ=255)
                                                                                             tttGCGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCg  <  1:78825/100‑1 (MQ=255)
                                                                                                 |                                                                                               
AAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCG  >  NC_000913/1492998‑1493190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑