New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4325861 =215 (1.680)116 (1.250) 68/130 NT 47.7% noncoding (60/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4374507 98 (1.050)noncoding (10/99 nt) RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP329 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 334 total aligned reads displayed.

TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4325983‑4325861
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggccggataaggcgtttacgcTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATATGCA  <  NC_000913/4374507‑4374409
                                                                                                                                                                                                                              
TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCG                                                                                                                            <  2:1078275/100‑1
 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGT                                                                                                                           <  2:349377/100‑1
  GGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTA                                                                                                                          >  2:139047/1‑100
   GCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAG                                                                                                                         >  2:538178/1‑100
    caGGATATGGCGTTTACGCCGCATCCGGCAATAGTGCCAACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGT                                                                                                                           <  1:3004510/95‑1
    CCGCATAACGCGTTTACGCCGCATTCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGT                                                                                                                           <  1:3054203/97‑1
     CGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGC                                                                                                                       >  1:1705828/1‑100
      GGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCC                                                                                                                      <  2:3055248/100‑1
      GGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCC                                                                                                                      <  2:159414/100‑1
         TAAGGCGTTTACGCCGCATCCGGCAATCGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGG                                                                                                                    <  1:3167887/99‑1
          AAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGAT                                                                                                                  >  1:1089033/1‑100
           AGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATA                                                                                                                 >  1:904972/1‑100
           AGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATA                                                                                                                 >  1:1060229/1‑100
           AGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATA                                                                                                                 <  1:1312145/100‑1
            GGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAA                                                                                                                <  2:2084687/100‑1
            GGCGTTTACGCCGCATCCGGCAATAGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGA                                                                                                                   <  1:1213723/97‑1
              cgcTTACGACGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGn                                                                                                              <  1:570118/97‑2
              CGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGG                                                                                                              <  2:462286/100‑1
              CGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGG                                                                                                              <  2:3422715/100‑1
                 tgACGCAGCCTCTGGCGATCTTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGT                                                                                                           <  1:1678076/98‑1
                  TACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTT                                                                                                          <  2:2127348/100‑1
                  TACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTT                                                                                                          >  2:1925682/1‑100
                   ACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTT                                                                                                         <  1:3329418/100‑1
                    CGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTT                                                                                                          <  2:2535357/98‑1
                      CCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACG                                                                                                      >  1:1754684/1‑100
                      CCGCATCCGGCAATCTTGCCAACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTT                                                                                                          <  1:2046806/96‑1
                        GCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGTGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCT                                                                                                    <  2:588568/100‑1
                         CATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCGTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTG                                                                                                   <  1:1925666/100‑1
                         CATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACACATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGC                                                                                                     <  2:2071366/98‑1
                         CATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTG                                                                                                   <  2:2706383/100‑1
                         CATCCGGCAATAGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTG                                                                                                   <  1:2182591/100‑1
                             CGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATC                                                                                               >  1:2824531/1‑100
                                 AATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGC                                                                                           <  2:1654559/100‑1
                                    GGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCCCCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCA                                                                                          <  1:424397/98‑1
                                    GGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAG                                                                                        <  2:404801/100‑1
                                     GTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGA                                                                                       <  2:1885735/100‑1
                                     GTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGA                                                                                       <  2:557230/100‑1
                                     GTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCATACAAATTCCCGCACCCTCAGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGA                                                                                       >  1:1884319/1‑100
                                       GCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGC                                                                                     <  1:532259/100‑1
                                          GACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAAC                                                                                  <  1:798214/100‑1
                                                   ATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAG                                                                         >  2:1663419/1‑100
                                                   ATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAG                                                                         <  2:1857188/100‑1
                                                    TGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGT                                                                        <  2:2628830/100‑1
                                                       GACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTAAGCTGCATCCGGCAAGAGCAACAAACGCAAGTAC                                                                      >  1:1827844/1‑99
                                                         CGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAcc                                                                   <  2:2331146/100‑3
                                                             TGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACC                                                               >  2:2854522/1‑100
                                                             TGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACC                                                               <  2:1822563/100‑1
                                                                 CGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTC                                                           <  1:374750/100‑1
                                                                  GTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCA                                                          >  2:2172357/1‑100
                                                                  GTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCA                                                          <  1:469615/100‑1
                                                                  GTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCA                                                          <  2:2295584/100‑1
                                                                   TCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCAT                                                         >  2:3146456/1‑100
                                                                   TCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCAT                                                         <  1:684722/100‑1
                                                                   TCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCAT                                                         <  1:1394031/100‑1
                                                                      TATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAA                                                      >  2:1452097/1‑100
                                                                      TATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAA                                                      >  1:1123446/1‑100
                                                                        TCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAAC                                                    <  2:974438/100‑1
                                                                            GCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGG                                                <  1:2727373/100‑1
                                                                             CCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGA                                               >  1:2586438/1‑100
                                                                               TACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAG                                             >  2:3324298/1‑100
                                                                               TACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAG                                             >  2:2931443/1‑100
                                                                               TACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAG                                             <  2:1277757/100‑1
                                                                                 CAAACTCACGCACCCTCCGTAGGCCGGATAAGGCGCTTACGCTGCATCCGGCAAGAGAAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTT                                           <  1:161860/100‑1
                                                                                     TTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAAT                                       >  2:696447/1‑100
                                                                                     TTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAAT                                       <  2:2420151/100‑1
                                                                                      TCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATC                                      <  2:742373/100‑1
                                                                                       CCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCT                                     >  2:874495/1‑100
                                                                                        CCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCACGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTT                                    >  1:955092/1‑100
                                                                                        CCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTT                                    <  1:2993656/100‑1
                                                                                          GCACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTG                                  <  2:3336987/100‑1
                                                                                           CACCCTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGC                                 <  2:103382/100‑1
                                                                                               CTCCGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGT                             >  1:2535710/1‑100
                                                                                                  CGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGC                          <  2:481530/100‑1
                                                                                                   GTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATGTTTGCCCGTTGCA                         <  2:2349356/100‑1
                                                                                                     AGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATA                       >  1:2477875/1‑100
                                                                                                     AGGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATA                       >  1:2848007/1‑100
                                                                                                      GGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAA                      >  2:2587022/1‑100
                                                                                                      GGCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAA                      >  1:296345/1‑100
                                                                                                       GCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAAC                     >  2:1203176/1‑100
                                                                                                       GCCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAAC                     >  1:647538/1‑100
                                                                                                        CCGGATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACC                    <  1:2272855/100‑1
                                                                                                           GATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTT                 <  1:940020/100‑1
                                                                                                           GATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTT                 >  1:1567184/1‑100
                                                                                                            ATAAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTA                <  2:2241231/100‑1
                                                                                                              AAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAAT              >  2:318703/1‑100
                                                                                                              AAGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAAT              <  1:859432/100‑1
                                                                                                               AGGCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATT             >  2:931021/1‑100
                                                                                                                GGCGTTTACGCTGCATCCGGCAAGCGCAACAAACGCAAGTACCGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTT                 >  1:3092644/1‑95
                                                                                                                 GCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTAT           <  1:2351525/100‑1
                                                                                                                 GCGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTAT           <  1:727538/100‑1
                                                                                                                  CGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGGATAACCTTTAATTATT          >  1:2026018/1‑100
                                                                                                                  CGTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATT          >  2:113728/1‑100
                                                                                                                   GTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTC         <  2:3265662/100‑1
                                                                                                                   GTTTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTC         <  2:2019255/100‑1
                                                                                                                     TTACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACTGCGACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCAT       <  1:2324836/100‑1
                                                                                                                       ACGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATAT     <  2:2992995/100‑1
                                                                                                                        CGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAATCTTTAATTATTCATATG    >  2:3387170/1‑100
                                                                                                                        CGCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATATG    <  1:1529727/100‑1
                                                                                                                         GCTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATATGC   <  1:3259425/100‑1
                                                                                                                          CTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATATGCA  >  2:2778483/1‑100
                                                                                                                                                                                                                              
TAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGCCGACTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACAAATTCCCGCACCCTCCGTAGGCCGGATAAGGCGTTTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4325983‑4325861
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggccggataaggcgtttacgcTGCATCCGGCAAGAGCAACAAACGCAAGTACAGCAACCTGTCATTAAACTGGGAAGTTTAATCTTTGCCCGTTGCATAACCTTTAATTATTCATATGCA  <  NC_000913/4374507‑4374409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.