New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)7 (0.060) 7/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 204 total aligned reads displayed.

GTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539576‑2539772
                                                                                                  |                                                                                                  
gTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAt                                                                                                   >  1:3284209/1‑100 (MQ=255)
gTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAt                                                                                                   >  2:3306187/1‑100 (MQ=255)
gTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAt                                                                                                   >  2:2914152/1‑100 (MQ=255)
 tACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATc                                                                                                  <  2:310012/100‑1 (MQ=255)
  aCTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcg                                                                                                 >  1:3407179/1‑100 (MQ=255)
   cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGCCCCTTGCACGTCTTATCAGGTCTACAGGTTACAAACCTTGCCCTTCAAAAGCTCGGATcgc                                                                                                >  2:1240111/1‑100 (MQ=255)
   cTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgc                                                                                                >  2:1210923/1‑100 (MQ=255)
    tCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATcgcg                                                                                               >  2:822868/1‑100 (MQ=255)
     cACGCTCTCTATCCATCCGTGGTGTTGCCTGATGCGCCGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  2:2759233/100‑1 (MQ=255)
     cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  1:2602614/100‑1 (MQ=255)
     cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              >  1:1233130/1‑100 (MQ=255)
     cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              >  1:1643593/1‑100 (MQ=255)
     cACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCgg                                                                                              <  2:1778110/100‑1 (MQ=255)
         aTCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAg                                                                                          <  2:3435392/100‑1 (MQ=255)
         aTCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAg                                                                                          <  2:2162447/100‑1 (MQ=255)
          tctcTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAgc                                                                                         <  2:824182/100‑1 (MQ=255)
           ctctATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAgcg                                                                                        <  1:2969549/100‑1 (MQ=255)
              tATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCt                                                                                     >  1:783413‑M2/1‑99 (MQ=255)
                  cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                 <  2:2382483‑M2/100‑6 (MQ=255)
                  cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                 <  1:827431‑M2/100‑6 (MQ=255)
                  cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                 <  1:2476380‑M2/100‑6 (MQ=255)
                   aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                >  1:2890079‑M2/1‑94 (MQ=255)
                    tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggc                                                                               <  2:1856915‑M1/100‑22 (MQ=255)
                     aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                              <  2:412508/100‑1 (MQ=255)
                      cGTGGTGGTGCCGGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAGCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                              <  1:1513946/99‑1 (MQ=255)
                       ttggtgTTGCCTGATGCAACACTTGGGCGCGTTATAAGCTTTAGAGTTGCCAAACCTTGCCATGAAAAAGCACGGATCGCGGGAAGATCCTCCGGGAGtt                                                                            <  1:989355/99‑1 (MQ=255)
                       gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                            <  2:1754167/100‑1 (MQ=255)
                       gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                            <  1:1221680/100‑1 (MQ=255)
                        tggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGttt                                                                           >  1:1060285/1‑100 (MQ=255)
                         ggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTa                                                                          >  1:264323/1‑100 (MQ=255)
                          gtgtTGCCTGATGCGACGCTTGCGGGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggcttttt                                                                          <  1:3242493‑M1/99‑27 (MQ=255)
                          gtgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGCTCGCGGGAAGCGCCTCCGGGCGTTTaa                                                                         >  1:2736103/1‑100 (MQ=255)
                          gtgtTGCCTGATGCGACGCTTGCGCATCTTATCAGGTCTAAAGGTTACAAGCCTTGCCATTAAAAAGCCCGGAGCGCGGGAAGCGCCTACGCGCGTTTa                                                                          <  1:2463058/99‑1 (MQ=37)
                            gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                       >  1:1671489/1‑100 (MQ=255)
                             ttGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGAggcgcttcccgcgatccgggctttttaatg                                                                      <  1:2684806‑M1/100‑31 (MQ=255)
                             ttGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatg                                                                      <  2:3008106‑M2/100‑17 (MQ=255)
                              tGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAACGCCCGGAggcgcttcccgcgatccgggctttttaatggc                                                                    <  1:3013602‑M1/100‑33 (MQ=255)
                               gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    >  2:1637571/1‑100 (MQ=255)
                               gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                    >  2:1952380/1‑100 (MQ=255)
                                  tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                  >  2:2988223/1‑99 (MQ=255)
                                  tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                 <  2:1060294/100‑1 (MQ=255)
                                      gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                                                             <  2:1424260/100‑1 (MQ=255)
                                        gACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCt                                                           >  2:1493847/1‑100 (MQ=255)
                                          cGCTTGCGCGTCTTATCAGGACTACAGGTTACAAACCTTGCCAGTAAAAAGCACGGAACGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTAt                                                         >  1:717795/1‑100 (MQ=255)
                                            cTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCa                                                       <  2:655456/100‑1 (MQ=255)
                                             ttGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAg                                                      <  2:3295593/100‑1 (MQ=255)
                                              tGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAgg                                                     <  1:3150434/100‑1 (MQ=255)
                                                cgcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAg                                                      >  1:1365073/1‑97 (MQ=255)
                                                  cgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCt                                                 >  2:2643256/1‑100 (MQ=255)
                                                   gTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCtt                                                <  1:2333522/100‑1 (MQ=255)
                                                   gTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCtt                                                <  2:1133855/100‑1 (MQ=255)
                                                    tCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCttt                                               >  1:1777826/1‑100 (MQ=255)
                                                     cTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtg                                              >  2:2174370/1‑100 (MQ=255)
                                                     cTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtg                                              <  1:1154103/100‑1 (MQ=255)
                                                      ttATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgt                                             >  2:3136040/1‑100 (MQ=255)
                                                         tCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCg                                          <  2:2767709/100‑1 (MQ=255)
                                                          cAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                         >  2:2975246/1‑100 (MQ=255)
                                                           aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACGTTCACTCAACCTATCAGCCGCTTTGTGCgag                                        <  2:2323462/100‑1 (MQ=255)
                                                           aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                        <  1:3250567/100‑1 (MQ=255)
                                                           aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                        <  1:822861/100‑1 (MQ=255)
                                                             gTCTACAGGTTACAACCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                      <  1:1207319/100‑1 (MQ=255)
                                                             gTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                      <  2:113703/100‑1 (MQ=255)
                                                             gTCTACACGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGagag                                      <  1:2195769/100‑1 (MQ=255)
                                                                tACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCaa                                   >  1:1018553/1‑100 (MQ=255)
                                                                 aCAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAg                                  >  2:532350/1‑100 (MQ=255)
                                                                  cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                 >  2:1866228/1‑100 (MQ=255)
                                                                     gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                              <  1:532346/100‑1 (MQ=255)
                                                                       tACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTc                            >  1:3023082/1‑100 (MQ=255)
                                                                       tACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTc                            >  1:1368742/1‑100 (MQ=255)
                                                                         cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  2:1578033/1‑100 (MQ=255)
                                                                         cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  1:1591316/1‑100 (MQ=255)
                                                                         cAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                          >  2:3224698/1‑100 (MQ=255)
                                                                           aaCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATcg                        <  2:1547759/100‑1 (MQ=255)
                                                                              cTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCgg                     <  1:1892092/100‑1 (MQ=255)
                                                                              cTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCgg                     <  1:1967364/100‑1 (MQ=255)
                                                                               ttGCCATTAAAANGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCANCGCggg                    <  1:1942156/100‑1 (MQ=255)
                                                                                  ccATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGttt                 <  1:1952364/100‑1 (MQ=255)
                                                                                   cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                <  2:1964827/100‑1 (MQ=255)
                                                                                   cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                >  2:457279/1‑100 (MQ=255)
                                                                                   cATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                <  1:3005086/100‑1 (MQ=255)
                                                                                     ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGa              <  2:2606428/100‑1 (MQ=255)
                                                                                       aaaaaGCCCGGATTGCGGGACACGAATCCGAGCATTAAACATACACTCAACCTATCAGGCGCGTTGTGCGACAGCCAGTTACTCATCGCCGGTTTCGATa            >  1:2279133/1‑100 (MQ=255)
                                                                                       aaaaaGCCCGGATGGCGGGAAGCGCCTCCGGACGTTTAACATGCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            >  2:2336218/1‑100 (MQ=255)
                                                                                       aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            >  2:1384552/1‑100 (MQ=255)
                                                                                       aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATa            <  1:467436/100‑1 (MQ=255)
                                                                                        aaaaGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacacca           <  1:2879315‑M2/100‑76 (MQ=255)
                                                                                          aaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGc         <  1:2382464/100‑1 (MQ=255)
                                                                                            gCCCGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       >  1:2233628‑M1/1‑7 (MQ=255)
                                                                                            gCCCGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta       >  2:2496887‑M1/1‑7 (MQ=255)
                                                                                             cccGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtat      <  2:888902‑M2/100‑81 (MQ=255)
                                                                                             cccGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcg      >  1:683930/1‑100 (MQ=255)
                                                                                              ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     <  1:1487103‑M1/100‑96 (MQ=255)
                                                                                              ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     >  2:2707004‑M1/1‑5 (MQ=255)
                                                                                              ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatg     <  1:3350099‑M1/100‑96 (MQ=255)
                                                                                              ccGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaagcaacaccacgtatg     >  2:3407204‑M1/1‑5 (MQ=255)
                                                                                               cGGAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatgg    >  1:1583627‑M1/1‑4 (MQ=255)
                                                                                                ggACCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACCCtcgtcg   <  2:1820240/100‑1 (MQ=255)
                                                                                                 gAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatggat  <  2:2233646‑M1/100‑99 (MQ=255)
                                                                                                 gAggcgcttcccgcgatccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgtatggat  <  2:2138914‑M1/100‑99 (MQ=255)
                                                                                                 gATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGc  <  1:888525/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
GTACTCACGATCTCTATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGC  >  NC_000913/2539576‑2539772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.