New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)11 (0.090) 8/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 189 total aligned reads displayed.

CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234
                                                                                                   |                                                                                                   
cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                                                                                                     >  2:3115525/1‑100 (MQ=255)
 gACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGg                                                                                                    >  2:2208474‑M1/1‑99 (MQ=255)
  aCGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgc                                                                                                   >  2:119076‑M1/1‑98 (MQ=255)
   cGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgcc                                                                                                  >  2:3085148‑M1/1‑97 (MQ=255)
     cTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccgg                                                                                                >  2:2266435‑M1/1‑95 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  1:1097278/100‑1 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:1439291/100‑1 (MQ=255)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             >  2:663614/1‑100 (MQ=255)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             >  2:1278529/1‑100 (MQ=255)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             <  1:39222/100‑1 (MQ=255)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             <  2:1483737/100‑1 (MQ=255)
          cgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAg                                                                                           <  2:516691/100‑1 (MQ=255)
           gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg                                                                                          <  2:320376/100‑1 (MQ=255)
            cgatctCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGc                                                                                         <  1:1477339/95‑1 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTGGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   <  1:146112/100‑1 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   >  1:2949583/1‑100 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   <  1:3112802/100‑1 (MQ=255)
                    ggCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc                                                                                 <  2:2547456/100‑1 (MQ=255)
                      ccTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc                                                                               <  2:1835875/100‑1 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                              >  2:2374800/1‑100 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                              >  1:1371356/1‑100 (MQ=255)
                        tACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTC                                                                             <  1:1589294‑M2/100‑1 (MQ=255)
                        tACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTC                                                                             <  1:2861427‑M2/100‑1 (MQ=255)
                         aCGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCC                                                                            <  2:2598451‑M2/100‑1 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                          >  2:2730627‑M2/1‑100 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                          >  1:13491‑M2/1‑100 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                          >  1:1239795‑M2/1‑100 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggc                                                                         <  2:872184‑M1/100‑29 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                         <  2:410009‑M2/100‑1 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                         >  2:1582248‑M2/1‑100 (MQ=255)
                                tCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaa                                                                     <  1:195530/100‑1 (MQ=255)
                                tCCAGCGCGGAGAATGCGTGTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaa                                                                     <  2:3231647/100‑1 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                    <  2:1371708/100‑1 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                    >  2:3420614/1‑100 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                    >  2:3377180/1‑100 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacat                                                                   <  2:3068030‑M1/100‑35 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacat                                                                   <  1:2283911‑M1/100‑35 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                   <  1:1942739/100‑1 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                   >  1:3125605/1‑100 (MQ=255)
                                   aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                  <  2:3224759/100‑1 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                 <  2:1974941/100‑1 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                  >  2:1873288/1‑99 (MQ=255)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                <  1:1438490/100‑1 (MQ=255)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                <  1:2658777/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagat                                                               <  2:2859266‑M1/100‑39 (MQ=255)
                                       cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCa                                                              <  1:728229/100‑1 (MQ=255)
                                        ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                             >  1:1055827/1‑100 (MQ=255)
                                        ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                             <  1:1230768/100‑1 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            <  2:2927276/100‑1 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            >  2:2916546/1‑100 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            >  2:1146271/1‑100 (MQ=255)
                                          aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                           <  1:964103/100‑1 (MQ=255)
                                            aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                         <  2:2111505/100‑1 (MQ=255)
                                            aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                         >  2:802872/1‑100 (MQ=255)
                                             aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagatttcttcc                                                        <  1:2159756‑M1/100‑46 (MQ=255)
                                              ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcct                                                       <  1:58245‑M2/100‑19 (MQ=255)
                                                cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                     >  1:1710886/1‑100 (MQ=255)
                                                cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                     >  2:1718567/1‑100 (MQ=255)
                                                   ttACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                  >  2:1548388/1‑100 (MQ=255)
                                                    tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagatttcttcctgttcac                                                 <  2:2553443‑M1/100‑53 (MQ=255)
                                                    tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAc                                                 >  2:1225626/1‑100 (MQ=255)
                                                     aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                                <  2:2776240/100‑1 (MQ=255)
                                                     aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                                >  1:1812301/1‑100 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                              <  2:512000/100‑1 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                              <  1:907791/100‑1 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                              <  1:785834/100‑1 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                              <  1:577160/100‑1 (MQ=255)
                                                          gcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGa                                           >  1:1788074/1‑100 (MQ=255)
                                                           cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                          >  2:960329/1‑100 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                      >  1:964838/1‑100 (MQ=255)
                                                                  cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                   >  1:3203606/1‑100 (MQ=255)
                                                                    aTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCgg                                 >  2:2628774/1‑100 (MQ=255)
                                                                     tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                <  1:2591805/100‑1 (MQ=255)
                                                                       tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                              >  1:747672/1‑100 (MQ=255)
                                                                        gTACGTGAACAGGAAGAAATCTATGTAGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                             <  1:356876/100‑1 (MQ=255)
                                                                             tGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                        >  1:3403075/1‑100 (MQ=255)
                                                                               aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCggg                      >  1:302173/1‑100 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                     <  1:1128598/100‑1 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                     <  1:3410124/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    >  2:2425886/1‑100 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    >  2:1690716/1‑100 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    <  2:1055836/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    <  2:395932/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGACAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                    >  2:2149932/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                  <  1:2354157/100‑1 (MQ=255)
                                                                                    gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                 >  1:1852230/1‑100 (MQ=255)
                                                                                     aataaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctc                <  1:2181845/97‑1 (MQ=255)
                                                                                     aagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctc                <  1:1527240/100‑1 (MQ=255)
                                                                                       gaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCtctc              <  2:1911676/100‑1 (MQ=255)
                                                                                            cTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacc         <  2:1778016‑M2/100‑65 (MQ=255)
                                                                                            cTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacc         <  1:1270845‑M2/100‑65 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt        <  2:3403100/100‑1 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctg       <  2:2446319‑M2/100‑67 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg       <  1:2363040/100‑1 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg       <  1:864818/100‑1 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac     <  1:1216598/100‑1 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac     >  2:1776257/1‑100 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatc   <  2:2821242‑M2/100‑71 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGTGCTCTCCCAAGTGacac   <  2:332710/100‑1 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca  >  1:525219/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.