| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 3,582,206 | Δ1,222 bp | 100% | IS1‑mediated | [yhhZ]–yrhA | [yhhZ], yrhA |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3582206 | 3584146–3583427 | 1222–1941 | 192 [0] | [69] 70 | [yhhZ]–[insB1] | [yhhZ], yrhA, insA, [insB1] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3582205 | 0 (0.000) | 174 (1.360) | 93/178 | NT | 100% | coding (343/1179 nt) | yhhZ | putative Hcp1 family polymorphic toxin protein; putative colicin‑like DNase/tRNase activity |
| ? | NC_000913 | 3583428 = | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
Only 100 of 192 total aligned reads displayed.
CAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCT > NC_000913/3582106‑3582304 | cAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATtc > 2:2659876/1‑100 (MQ=255) aaTTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCg < 2:1087761‑M1/100‑2 (MQ=255) atttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtga < 2:3261862‑M1/100‑6 (MQ=255) tttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgat < 1:3025548‑M1/100‑7 (MQ=255) ttatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatg < 2:2736113‑M1/100‑8 (MQ=255) tatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgc < 1:3001822‑M1/100‑9 (MQ=255) tatGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAAATAAGAGGCGCTTTTTTATCGGCTATTCggtgctgc > 1:326589‑M1/1‑92 (MQ=255) gATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgcca > 2:1528805‑M1/1‑87 (MQ=255) tttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaac < 2:1958988‑M1/100‑16 (MQ=255) tttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaac > 1:1488406‑M1/1‑85 (MQ=255) ttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaact < 1:1979721‑M1/100‑17 (MQ=255) ttGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggcgatgctgccaagt < 2:2339256‑M1/100‑17 (MQ=255) gACTTCTATCGAATAAATAGATTTGGTAGATTGGTAAAGTATTATTATATACATCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttn < 1:1553746‑M1/100‑19 (MQ=255) ttCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttac < 1:2942562‑M1/98‑20 (MQ=255) aTCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgattt > 2:3178971‑M1/1‑75 (MQ=255) tCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgattta < 1:1445596‑M1/100‑27 (MQ=255) cGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttag > 2:1174129‑M1/1‑73 (MQ=255) gAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagt > 2:1385730‑M1/1‑72 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg < 2:1480015‑M1/100‑30 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg < 2:1202298‑M1/100‑30 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg < 1:2904829‑M1/100‑30 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg > 1:2556372‑M1/1‑71 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtg < 1:1605258‑M1/100‑30 (MQ=255) aataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgacaacttagtgtttta > 1:2263367‑M1/1‑71 (MQ=255) ataaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgt < 1:2289351‑M1/100‑31 (MQ=255) taaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgt > 2:440667‑M1/1‑69 (MQ=255) aaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtat > 2:1673316‑M1/1‑68 (MQ=255) aaataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtat < 1:2490631‑M1/100‑33 (MQ=255) aataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatg > 1:1302929‑M1/1‑67 (MQ=255) ataGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatga > 2:2553942‑M1/1‑66 (MQ=255) gATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatgg < 1:1385718‑M1/100‑38 (MQ=255) gATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatgg > 2:344951‑M1/1‑63 (MQ=255) aTTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggt < 1:3085024‑M1/100‑39 (MQ=255) ttGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:2794413‑M1/100‑41 (MQ=255) tGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtt > 1:1160763‑M1/1‑59 (MQ=255) tGGTAGATTGGAAAAGTATTATTATAGACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtt > 2:2107582‑M1/1‑59 (MQ=255) ggTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgttt > 1:163967‑M1/1‑58 (MQ=255) tAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgttttt > 1:2125533‑M1/1‑56 (MQ=255) tAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 2:3457841‑M1/100‑45 (MQ=255) tAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCcgtgatgctgccaacttactgatttagtgtatgatggtgtcttt > 1:682934‑M1/1‑56 (MQ=255) gATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 2:2118615‑M1/1‑54 (MQ=255) gATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga < 1:941659‑M1/100‑47 (MQ=255) aTTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag > 1:2899077‑M1/1‑53 (MQ=255) ttGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 2:1867350‑M1/100‑49 (MQ=255) tGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt > 2:2915191‑M1/1‑51 (MQ=255) ggAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg > 1:967658‑M1/1‑50 (MQ=255) gAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc > 1:1606201‑M1/1‑49 (MQ=255) gTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag > 2:1264465‑M1/1‑44 (MQ=255) tattattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt < 2:195527‑M1/100‑58 (MQ=255) attattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg < 2:1419805‑M1/100‑59 (MQ=255) attattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg > 2:3088971‑M1/1‑42 (MQ=255) attattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg > 1:323868‑M1/1‑42 (MQ=255) attattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg < 1:1808753‑M1/100‑59 (MQ=255) tattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc > 2:973915‑M1/1‑40 (MQ=255) tattatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc < 1:3305858‑M1/100‑61 (MQ=255) attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 2:639384‑M1/1‑39 (MQ=255) attatATACAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 2:1815610‑M1/1‑39 (MQ=255) atataCAACTAAGAGGCGCTTTTTTTTTTTTTTTTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgcttcagtggcttct > 1:102513‑M1/1‑36 (MQ=255) atataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct > 1:1754458‑M1/1‑36 (MQ=255) tataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 2:2472943‑M1/1‑35 (MQ=255) tataCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg < 1:2659856‑M1/100‑66 (MQ=255) natacAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 1:738673‑M1/2‑35 (MQ=255) taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 2:2152932‑M1/1‑33 (MQ=255) taCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 1:1246290‑M1/1‑33 (MQ=255) aCAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt < 2:1913715‑M1/100‑69 (MQ=255) cAACTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc < 2:1227307‑M1/100‑70 (MQ=255) aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta < 1:3087413‑M1/100‑72 (MQ=255) aCTAAGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta > 1:3192754‑M1/1‑29 (MQ=255) aaGAGGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca > 2:882296‑M1/1‑26 (MQ=255) agagGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 1:1681566‑M1/1‑25 (MQ=255) gagGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc > 1:3064622‑M1/1‑24 (MQ=255) gagGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc < 2:1307008‑M1/100‑77 (MQ=255) gagGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc < 1:603792‑M1/100‑77 (MQ=255) agGCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc < 1:1254131‑M1/99‑77 (MQ=255) ggCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 1:351891‑M1/1‑22 (MQ=255) ggCGCTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg > 2:86028‑M1/1‑22 (MQ=255) cgcTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc < 2:2257757‑M1/100‑81 (MQ=255) cTTTTTTATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc > 2:1033314‑M1/1‑18 (MQ=255) ttttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc < 1:317914‑M1/100‑86 (MQ=255) ttttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc < 1:1528790‑M1/100‑86 (MQ=255) tttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct > 2:2719944‑M1/1‑14 (MQ=255) tttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 2:3150135‑M1/100‑87 (MQ=255) ttATCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg > 1:869586‑M1/1‑13 (MQ=255) tCGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 2:295891‑M1/100‑91 (MQ=255) cGGCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca > 2:585097‑M1/1‑9 (MQ=255) ggCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 1:280037‑M1/1‑8 (MQ=255) ggCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag < 1:2200268‑M1/100‑93 (MQ=255) ggCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 1:3099881‑M1/1‑8 (MQ=255) ggCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag < 2:1482056‑M1/100‑93 (MQ=255) ggCTATTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag > 2:2538939‑M1/1‑8 (MQ=255) gCTATTCggtgatgctgccaacttactgatttagtgtaagatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagc > 1:2135344‑M1/1‑7 (MQ=255) aTTCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcgagcggcttctgtttctatcagctgtccctcctgttcagctac > 1:2427500‑M1/1‑4 (MQ=255) ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact < 1:406040‑M1/100‑98 (MQ=255) ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact < 2:569588‑M1/100‑98 (MQ=255) ttCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact > 1:1028393‑M1/1‑3 (MQ=255) tCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg < 2:2794281‑M1/100‑99 (MQ=255) cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 2:317356‑M1/1‑1 (MQ=255) cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga < 2:3380548‑M1/100‑100 (MQ=255) cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 1:173488‑M1/1‑1 (MQ=255) cggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 1:1140092‑M1/1‑1 (MQ=255) | CAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCT > NC_000913/3582106‑3582304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |