BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4148478	NA (NA)	8 (0.070)	6/164	NT	NA	noncoding (49/82 nt)	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 4148511	NA (NA)	8 (0.070)	6/164	NT	NA	noncoding (82/82 nt)	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 219 total aligned reads displayed.

GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577

gAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                                                                                     <  2:2696015/100‑1 (MQ=255)

 aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGg                                                                                                    <  1:3098067‑M1/100‑2 (MQ=255)

     gtgtGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccgg                                                                                                >  2:329395‑M1/1‑95 (MQ=255)

       gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggat                                                                                              >  2:2712099‑M1/1‑93 (MQ=255)

         ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                                            >  1:2571990/1‑100 (MQ=255)

         ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                                            >  2:493470/1‑100 (MQ=255)

         ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                                            >  2:559859/1‑100 (MQ=255)

           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACTGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  2:1838260/1‑100 (MQ=255)

           ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                                          >  2:156323/1‑100 (MQ=255)

               aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                                                                                      <  2:3236600/100‑1 (MQ=255)

               aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                                                                                      >  1:2328133/1‑100 (MQ=255)

                 gggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGTCGGATAAGACGCGTc                                                                                    <  1:1283280/100‑1 (MQ=255)

                 gggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                                                                                    <  1:454563/100‑1 (MQ=255)

                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                                                                                    >  1:2042403/1‑99 (MQ=255)

                  ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                                   >  2:2987270/1‑100 (MQ=255)

                       tCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAc                                                                                         >  1:2864609/1‑89 (MQ=255)

                        cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc                                                                             >  2:3074606/1‑100 (MQ=255)

                         gATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCg                                                                            <  2:2328151/100‑1 (MQ=255)

                           tGTAAACATTGCGGCAGTTGTATTGCCTGATGTGGCGTCAACGCCTTATCCAGCCGACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          >  1:2110023‑M2/1‑100 (MQ=255)

                           tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  2:316420‑M2/100‑1 (MQ=255)

                           tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCA                                                                          <  1:3320281‑M2/100‑1 (MQ=255)

                            gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAT                                                                         <  1:249523‑M2/100‑1 (MQ=255)

                              aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCC                                                                       >  2:851479‑M2/1‑100 (MQ=255)

                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccg                                                                      <  1:1043623‑M1/100‑32 (MQ=255)

                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      >  1:3334705‑M2/1‑100 (MQ=255)

                               aaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCG                                                                      <  2:2089000‑M2/100‑1 (MQ=255)

                                aCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGG                                                                     >  2:3373262‑M2/1‑100 (MQ=255)

                                  aTTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcc                                                                   <  1:1574284‑M1/100‑35 (MQ=255)

                                    tGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCaaa                                                                 >  2:961833/1‑100 (MQ=255)

                                     gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                                <  1:3035759/100‑1 (MQ=255)

                                     gCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                                >  2:2372562/1‑100 (MQ=255)

                                       ggCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg                                                              >  2:705336/1‑100 (MQ=255)

                                        gCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc                                                             >  1:412675/1‑100 (MQ=255)

                                           gTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCACGCGTCGCATCCGGCAAATAGCGcc                                                          >  1:344049/1‑100 (MQ=255)

                                           gTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGcc                                                          <  2:1221526/100‑1 (MQ=255)

                                             tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGGCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                                        <  1:700943/100‑1 (MQ=255)

                                             ngTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                                        >  2:3333296/2‑100 (MQ=255)

                                               tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggc                                                      <  2:669513‑M1/100‑48 (MQ=255)

                                               tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGc                                                      <  2:909651/100‑1 (MQ=255)

                                                  tGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGCTAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                   >  1:3235996/1‑100 (MQ=255)

                                                  tGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                   >  2:617413/1‑100 (MQ=255)

                                                  tGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGa                                                   >  2:2111929/1‑100 (MQ=255)

                                                   gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                                  >  2:2617560/1‑100 (MQ=255)

                                                    ccGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATa                                                 >  1:3142359/1‑100 (MQ=255)

                                                      ggATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAAt                                               >  2:2553534/1‑100 (MQ=255)

                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            >  1:2263971/1‑100 (MQ=255)

                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            >  2:2147159/1‑100 (MQ=255)

                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            <  2:1030104/100‑1 (MQ=255)

                                                         tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                                            <  1:1180995/100‑1 (MQ=255)

                                                           tgGCGTAAACGCCGTATCCAGCCTCCCGCCGCGATCTGTAGGCCGGATCAGACGCGTCAAGCGTCGGATCCGGCAAATAGCGCCTGGCTGATAATTACTg                                          <  1:3350117/100‑1 (MQ=39)

                                                            ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                                         <  2:1039513/100‑1 (MQ=255)

                                                               gTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTa                                      <  1:3105150/100‑1 (MQ=255)

                                                                tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                                     <  2:1253773/100‑1 (MQ=255)

                                                                tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                                     <  2:1346502/100‑1 (MQ=255)

                                                                tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                                     <  2:1608057/100‑1 (MQ=255)

                                                                 aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                                    <  1:1413585/100‑1 (MQ=255)

                                                                 aaaCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACCGATTAcc                                    <  2:1814690/100‑1 (MQ=255)

                                                                   aCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                                  <  1:599966/100‑1 (MQ=255)

                                                                    cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAccc                                   >  2:1154140/1‑98 (MQ=255)

                                                                           tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          >  2:2785099/1‑100 (MQ=255)

                                                                           tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACCCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg                          >  1:1847298/1‑100 (MQ=255)

                                                                            tccgatctccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         <  1:3186006/92‑1 (MQ=255)

                                                                            ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  1:2951340/1‑100 (MQ=255)

                                                                            ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         >  1:1784062/1‑100 (MQ=255)

                                                                            ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         <  2:2922300/100‑1 (MQ=255)

                                                                             cAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGcc                        >  2:1379106/1‑100 (MQ=255)

                                                                                  tACCGTCGTGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc                         <  1:2696581/94‑1 (MQ=255)

                                                                                   aCCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAggg                  >  2:2871309/1‑100 (MQ=255)

                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGcagatcgga                 >  2:3186030/1‑92 (MQ=255)

                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  1:3332112/100‑1 (MQ=255)

                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  2:3314208/100‑1 (MQ=255)

                                                                                    ccgccgCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGc                 <  1:1592291/100‑1 (MQ=255)

                                                                                     cgccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCa                >  2:1105270/1‑100 (MQ=255)

                                                                                      gccgcGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGCTCGCCATAGGGCAg               >  1:2902304/1‑100 (MQ=255)

                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:2372543/100‑1 (MQ=255)

                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:1803418/100‑1 (MQ=255)

                                                                                        cgcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtg             <  1:329392/100‑1 (MQ=255)

                                                                                         gcgATCTGTAGGCCGGATAAGACGCGTCAATCGTGGCATCCGGCAAATAGTGCCTGGCTGATAATTACTGATTACCCACCTGAGCGCCATAGGGCAgtg             <  1:2969133/99‑1 (MQ=38)

                                                                                         gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgt            >  2:3338805/1‑100 (MQ=255)

                                                                                         gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgt            >  2:1679131/1‑100 (MQ=255)

                                                                                         gcgATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgt            >  1:1690126/1‑100 (MQ=255)

                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          <  2:3109670/100‑1 (MQ=255)

                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          >  2:2248653/1‑100 (MQ=255)

                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          >  2:817517/1‑100 (MQ=255)

                                                                                           gATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAgtgtgt          >  1:873074/1‑100 (MQ=255)

                                                                                            aTCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTc         >  1:2048781/1‑100 (MQ=255)

                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  2:980359/100‑1 (MQ=255)

                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  2:2951363/100‑1 (MQ=255)

                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        >  2:1505152/1‑100 (MQ=255)

                                                                                             tCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGACTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCg        <  1:2534247/100‑1 (MQ=255)

                                                                                               tGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGt       >  2:1299507/1‑99 (MQ=255)

                                                                                               tGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTa      >  2:2086488/1‑100 (MQ=255)

                                                                                                gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactgccgt     <  2:581984‑M2/100‑64 (MQ=255)

                                                                                                gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTaa     >  2:2499822/1‑100 (MQ=255)

                                                                                                gTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTaa     >  1:1908363/1‑100 (MQ=255)

                                                                                                 tAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAAt    >  2:392362/1‑100 (MQ=255)

                                                                                                 tAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAAt    >  1:790981/1‑100 (MQ=255)

                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   >  2:33235/1‑100 (MQ=255)

                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   <  1:216213/100‑1 (MQ=255)

                                                                                                  aGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCGGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATc   <  2:1922706/100‑1 (MQ=255)

GAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAGTGTGTCGTAATCG  >  NC_000913/4148379‑4148577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.