BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2837465 =	NA (NA)	10 (0.090)	5/162	NT	NA	noncoding (1/27 nt)	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	2837492 =	NA (NA)	10 (0.090)	5/162	NT	NA	intergenic (‑67/+86)	hypF/hydN	carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit

Only 100 of 161 total aligned reads displayed.

GTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCG  >  NC_000913/2837395‑2837591

 tctggcatcaaaggaattcccggaaatattcgtagaatacggagcgggcggtatcgccgacctgtgactgccggacacgacagcgtcgcatccggca                                                                                                     <  1:206565‑M2/1‑1 (MQ=255)

   ggACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcac                                                                                                >  2:2684873/1‑100 (MQ=255)

    gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                                               >  2:922247/1‑100 (MQ=255)

      cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                             >  2:1888194/1‑100 (MQ=255)

      cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                             >  1:3146227/1‑100 (MQ=255)

      cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                                             <  1:1973834/100‑1 (MQ=255)

        ncGCAAGAAGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                                                           >  1:537680/2‑100 (MQ=255)

        ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                                                           >  1:873855/1‑100 (MQ=255)

        acGCAAGATGTGTTTTTTACCATTGAGTTATTAACGCCATAATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCATCGCATCCCGCAGTCACAGGTc                                                                                           >  1:803408/2‑100 (MQ=255)

         cGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCg                                                                                          >  1:2975155/1‑100 (MQ=255)

          gCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCgg                                                                                         <  2:3101893/100‑1 (MQ=255)

             aGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGa                                                                                      <  1:2515155/100‑1 (MQ=255)

              gATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGAt                                                                                     <  2:1600752/100‑1 (MQ=255)

                 gtgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAcc                                                                                  >  1:1267228/1‑100 (MQ=255)

                  tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccg                                                                                 <  2:695736/100‑1 (MQ=255)

                  tgtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccg                                                                                 <  1:909152/100‑1 (MQ=255)

                   gtTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgc                                                                                >  2:183598/1‑100 (MQ=255)

                    ttttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgcc                                                                               <  2:15592/100‑1 (MQ=255)

                     tttttGCCATTGATTTATTCCCGCCATCATGAATTGCGTAGCCCGCCCTGCCGGACACGACAGCGTCGCCTCCGGCAGTCACAGGTCGGCGATAccgccc                                                                              <  1:829574/100‑1 (MQ=255)

                     tgtttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgccc                                                                              <  1:2103405/98‑1 (MQ=255)

                      ttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgcccg                                                                             >  2:41755/1‑100 (MQ=255)

                       tttGCCATTGGGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgcccgc                                                                            <  2:316357/100‑1 (MQ=255)

                        ttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCt                                                                           <  2:3038340/100‑1 (MQ=255)

                          gCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTcc                                                                         <  2:1702542/100‑1 (MQ=255)

                          gCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTcc                                                                         <  2:1702600/100‑1 (MQ=255)

                          gCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTcc                                                                         <  1:1699578/100‑1 (MQ=255)

                            cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCGCCGt                                                                       >  1:2288686/1‑100 (MQ=255)

                             aTTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTa                                                                      <  1:73663/100‑1 (MQ=255)

                               tGAGTTATTCCCGCCATCATGCATTGCGTAACCAGCCCTGCCGGACACGACAGCGTCGCATCCGGCCGTCACAGGTCGGCGATACCGCCCGCTCCGtct                                                                     >  1:3297133/1‑97 (MQ=255)

                                   ttATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTAc                                                                <  2:1839891/100‑1 (MQ=255)

                                    tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                                               <  1:143723/100‑1 (MQ=255)

                                    tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                                               >  2:1518546/1‑100 (MQ=255)

                                     aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                                              >  1:2377972/1‑100 (MQ=255)

                                     aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                                              <  2:389520/100‑1 (MQ=255)

                                     aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                                              <  1:3441091/100‑1 (MQ=255)

                                       tCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAat                                                            >  1:3051559/1‑100 (MQ=255)

                                        cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                                                           >  2:2030199/1‑100 (MQ=255)

                                        cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                                                           >  1:1654275/1‑100 (MQ=255)

                                         ccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAatat                                                          >  1:1192638/1‑100 (MQ=255)

                                           gCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATAttt                                                        >  1:3145906/1‑100 (MQ=255)

                                           gCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATAttt                                                        <  2:1006186/100‑1 (MQ=255)

                                             catcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTcc                                                      <  1:2845734/100‑1 (MQ=255)

                                               tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                                                    <  2:1446847/100‑1 (MQ=255)

                                               tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                                                    <  2:2825081/100‑1 (MQ=255)

                                               tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                                                    >  2:1553709/1‑100 (MQ=255)

                                               tcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCgg                                                    <  2:2399611/100‑1 (MQ=255)

                                                natGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCggg                                                   >  1:3365557/2‑100 (MQ=255)

                                                catGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCggg                                                   <  2:3146251/100‑1 (MQ=255)

                                                 atGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                                                  <  1:2848160/100‑1 (MQ=255)

                                                 atGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGa                                                  <  2:1210114/100‑1 (MQ=255)

                                                  tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGaa                                                 <  1:742035/100‑1 (MQ=255)

                                                  tGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGaa                                                 >  2:1395446/1‑100 (MQ=255)

                                                    aaTTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAtt                                               <  1:665776/100‑1 (MQ=255)

                                                        gCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCtt                                           <  1:1741477/100‑1 (MQ=255)

                                                         cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt                                          <  1:1219356/100‑1 (MQ=255)

                                                         cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCttt                                          >  2:375554/1‑100 (MQ=255)

                                                           tAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAGTCCTTTGa                                        >  2:1005514/1‑100 (MQ=255)

                                                            aaCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGAt                                       <  2:2377991/100‑1 (MQ=255)

                                                              cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg                                      <  1:193412/99‑1 (MQ=255)

                                                                cGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCa                                   <  1:1961430/100‑1 (MQ=255)

                                                                 gCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAg                                  <  1:1080243/100‑1 (MQ=255)

                                                                 gCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAg                                  <  2:1404644/100‑1 (MQ=255)

                                                                    ctgccggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAc                               >  1:1294201‑M2/30‑100 (MQ=255)

                                                                    ctaccggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAc                               >  1:2479388‑M2/30‑100 (MQ=255)

                                                                    ctGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAAc                               >  1:1518531‑M1/3‑100 (MQ=255)

                                                                     tgccggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACa                              >  2:3363294‑M2/29‑100 (MQ=255)

                                                                     tgccggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACa                              >  2:1482957‑M2/29‑100 (MQ=255)

                                                                       ccggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCCCCGTATTCTACGAATATTCCCGGGAATTCCTCTGATGCCAGAACAGt                            >  1:896855‑M2/27‑100 (MQ=255)

                                                                       CCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGCATTCCTTTGATGCCAGAACAGt                            <  1:838805‑M1/100‑1 (MQ=255)

                                                                         ggatgcgacgctgtcgtgtccggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                          >  2:213004‑M2/25‑100 (MQ=255)

                                                                         GGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                          >  1:1315295‑M1/1‑100 (MQ=255)

                                                                         GGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                          <  2:2209112‑M1/100‑1 (MQ=255)

                                                                         GGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTc                          <  2:2092791‑M1/100‑1 (MQ=255)

                                                                           ACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTg                        >  2:413846‑M1/1‑100 (MQ=255)

                                                                            cacGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGt                       >  2:2472029/1‑100 (MQ=255)

                                                                             acGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGt                       >  1:2364783/1‑99 (MQ=255)

                                                                             acGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTa                      <  1:1712238/100‑1 (MQ=255)

                                                                             acGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTa                      <  1:1395434/100‑1 (MQ=255)

                                                                              cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                     >  2:611572/1‑100 (MQ=255)

                                                                              cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                     >  1:365903/1‑100 (MQ=255)

                                                                              cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                     >  1:1366261/1‑100 (MQ=255)

                                                                              cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                     >  2:3273043/1‑100 (MQ=255)

                                                                              cGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTaa                     >  1:1916049/1‑100 (MQ=255)

                                                                               gACAGCATCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAg                    <  1:22047/100‑1 (MQ=255)

                                                                                     gTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAttttt              >  1:3197722/1‑100 (MQ=255)

                                                                                     gTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAttttt              >  2:19201/1‑100 (MQ=255)

                                                                                     gTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAttttt              <  2:1512089/100‑1 (MQ=255)

                                                                                     gTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAttttt              <  1:1553694/100‑1 (MQ=255)

                                                                                     gTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGAtttt               >  1:591674/1‑99 (MQ=255)

                                                                                      tCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTa             >  1:1674920/1‑100 (MQ=255)

                                                                                      tCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTa             >  2:3187931/1‑100 (MQ=255)

                                                                                      tCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTa             <  2:1229730/100‑1 (MQ=255)

                                                                                       cGCATCCGGCAGTCACTGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAg            <  1:2030182/100‑1 (MQ=255)

                                                                                       cGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAg            >  2:2986900/1‑100 (MQ=255)

                                                                                       cGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAg            <  1:2920377/100‑1 (MQ=255)

                                                                                       cGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAg            <  1:1005506/100‑1 (MQ=255)

                                                                                        gCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGa           >  2:550419/1‑100 (MQ=255)

                                                                                          aTCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACGGTTCTGTAAGATTTTTAGAAc         >  1:2829175/1‑100 (MQ=255)

                                                                                              ggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCa     >  1:2603758‑M2/4‑100 (MQ=255)

                                                                                              ggcAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCa     >  1:1495810‑M2/4‑100 (MQ=255)

GTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACAGTTCTGTAAGATTTTTAGAACATCAGCG  >  NC_000913/2837395‑2837591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.