BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3781698 =	NA (NA)	5 (0.040)	4/164	NT	NA	noncoding (1/29 nt)	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3781727 =	NA (NA)	5 (0.040)	4/164	NT	NA	intergenic (+39/+14)	trmL/cysE	tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase

Only 100 of 179 total aligned reads displayed.

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGTT  >  NC_000913/3781628‑3781826

tggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGAT‑ACATCGCATCCGGCAc                                                                                                    >  1:650338‑M1/71‑100 (MQ=255)

ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                     >  1:1653418/1‑100 (MQ=255)

 ggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGTCGGATAGATGATTACATCGCATCCGGCAc                                                                                                    >  1:1168090‑M1/70‑100 (MQ=255)

 gTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                     >  1:3136215/1‑99 (MQ=255)

 gTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAc                                                                                                    <  2:3291106/100‑1 (MQ=255)

 gTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAc                                                                                                    <  2:1240320/100‑1 (MQ=255)

  tAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACg                                                                                                   <  2:2535688/100‑1 (MQ=255)

    ccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACGAt                                                                                                 >  2:529392‑M1/67‑100 (MQ=255)

     tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                                >  2:1400730/1‑100 (MQ=255)

      ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                                               <  2:3371901/100‑1 (MQ=255)

      ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                                               >  2:2587116/1‑100 (MQ=255)

      ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                                >  1:491827/1‑99 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                                             <  2:913826/100‑1 (MQ=255)

        tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                                                             <  1:1777321/100‑1 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                            <  2:3046526/100‑1 (MQ=255)

           aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                                                          >  2:564854/1‑100 (MQ=255)

              aaGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAt                                                                                       >  1:1009213/1‑100 (MQ=255)

               aGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAtt                                                                                      <  2:287954/100‑1 (MQ=255)

                 ccTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAg                                                                                    >  1:3090421/1‑100 (MQ=255)

                  cTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGa                                                                                   >  1:1248941/1‑100 (MQ=255)

                   ctgcggcAGTCGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTTCAGCGCATCCGGCACGATCACAGGACATTAGat                                                                                  <  1:2269083/98‑1 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 >  2:553630/1‑100 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 <  1:2859087/100‑1 (MQ=255)

                     gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                                                <  1:1220058/100‑1 (MQ=255)

                       ggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccca                                                                              >  2:1876384/1‑100 (MQ=255)

                           gTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatccc                                                                          <  2:2323446/100‑1 (MQ=255)

                            ttGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATcccc                                                                         >  2:847289/1‑100 (MQ=255)

                             tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                                                        <  1:1686855/100‑1 (MQ=255)

                             tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                                                        <  2:358865/100‑1 (MQ=255)

                                ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                                                     <  1:97120/100‑1 (MQ=255)

                                 gTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACt                                                                    <  1:3205943/100‑1 (MQ=255)

                                   aTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCa                                                                  >  2:610873/1‑100 (MQ=255)

                                    tCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCaa                                                                 >  1:1037827/1‑100 (MQ=255)

                                      cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                                               >  1:1585885/1‑100 (MQ=255)

                                      cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                                               <  2:1330105/100‑1 (MQ=255)

                                      cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                                               >  1:1685467/1‑100 (MQ=255)

                                       gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                                              <  2:1912569/100‑1 (MQ=255)

                                            cGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATgg                                                         >  1:2169775/1‑100 (MQ=255)

                                              gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                                                       <  1:1785171/100‑1 (MQ=255)

                                               tATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                                                      <  2:530125/100‑1 (MQ=255)

                                                 ttGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                                                    >  2:445053/1‑100 (MQ=255)

                                                 ttGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                                                    >  1:2801252/1‑100 (MQ=255)

                                                 cgatctgaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                                                    <  1:1494480/94‑1 (MQ=255)

                                                    agagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAcc                                                 <  1:766250/100‑1 (MQ=255)

                                                      agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGt                                               >  1:228265/1‑100 (MQ=255)

                                                      agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGt                                               >  1:155240/1‑100 (MQ=255)

                                                       gaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATagatcg                                              >  2:1494494/1‑95 (MQ=255)

                                                        aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg                                             <  2:145075/100‑1 (MQ=255)

                                                           aGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaaa                                          <  2:903368/100‑1 (MQ=255)

                                                           aGTTACTGTAGGCCGAATAGATGTTTAAATCGCATCCTGCATGATCTCTGGACATTAGATCCCATCAACATAATCAAATGTATGGTTAATGCCGTTGaa                                           <  1:3031398/99‑1 (MQ=255)

                                                            gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt                                         <  2:1248952/100‑1 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt                                      <  2:1377071/100‑1 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt                                      >  1:611809/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  2:3088345/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  1:3182390/1‑100 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                    <  1:664930/100‑1 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                    <  2:2926091/100‑1 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                    <  2:2412620/100‑1 (MQ=255)

                                                                  gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt                                   <  1:1904453/100‑1 (MQ=255)

                                                                  gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt                                   <  1:2561593/100‑1 (MQ=255)

                                                                  gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt                                   >  2:2020267/1‑100 (MQ=255)

                                                                     gtgccggatgcgatgtatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                >  1:650338‑M2/31‑100 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                <  2:679372/100‑1 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                >  2:2302257/1‑100 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                <  1:87352/100‑1 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                <  1:1011678/100‑1 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                <  2:1653434/100‑1 (MQ=255)

                                                                      gccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCat                               >  1:1323239‑M2/30‑100 (MQ=255)

                                                                       ccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCata                              >  1:2090724‑M2/29‑100 (MQ=255)

                                                                       CCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGATATGCTGGTCCata                              >  1:2144151‑M1/1‑100 (MQ=255)

                                                                       CCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATACTGGTCCata                              <  1:1481451‑M1/100‑1 (MQ=255)

                                                                        CGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCatat                             >  2:3376520‑M1/1‑100 (MQ=255)

                                                                        CGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCatat                             <  2:1593733‑M1/100‑1 (MQ=255)

                                                                        CGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCatat                             <  2:2703985‑M1/100‑1 (MQ=255)

                                                                         GGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATc                            >  1:69647‑M1/1‑100 (MQ=255)

                                                                          GATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATcc                           >  1:1400718‑M1/1‑100 (MQ=255)

                                                                            TAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCAt                         <  2:1722118‑M1/100‑1 (MQ=255)

                                                                              gatgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTg                       >  2:2706796/1‑100 (MQ=255)

                                                                                tgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGAt                     >  2:787949/1‑100 (MQ=255)

                                                                                 gatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATg                    <  2:2477636/100‑1 (MQ=255)

                                                                                   ttACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGc                  >  1:2505688/1‑100 (MQ=255)

                                                                                    tACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCt                 >  2:524128/1‑100 (MQ=255)

                                                                                    tACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCt                 <  2:215023/100‑1 (MQ=255)

                                                                                     aCATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCtt                <  1:842641/100‑1 (MQ=255)

                                                                                      cATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTa               >  2:40174/1‑100 (MQ=255)

                                                                                      cATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTa               <  2:3145791/100‑1 (MQ=255)

                                                                                      cATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTa               >  2:2257866/1‑100 (MQ=255)

                                                                                       aTCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTAt              >  2:2092501/1‑100 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc           <  2:155241/100‑1 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc           >  2:307366/1‑100 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc           >  2:2391480/1‑100 (MQ=255)

                                                                                              ccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTc       <  1:2918624‑M2/95‑1 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt      >  2:3412916‑M2/5‑100 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt      >  2:787094‑M2/5‑100 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt      >  2:715860‑M2/5‑100 (MQ=255)

                                                                                                 gcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTg     <  1:1461991‑M2/97‑1 (MQ=255)

                                                                                                 gcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGCCTTATCGCTGTTTgg    >  2:435501‑M2/3‑100 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGt   <  2:2169792‑M2/99‑1 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGt   <  1:2070399‑M2/99‑1 (MQ=255)

                                                                                                   aCGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGtt  <  1:542350/100‑1 (MQ=255)

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGTT  >  NC_000913/3781628‑3781826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.