BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4332016 =	NA (NA)	7 (0.060)	5/160	NT	NA	noncoding (3/32 nt)	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4332047 =	NA (NA)	7 (0.060)	5/160	NT	NA	intergenic (+43/‑69)	proP/pmrR	proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Only 100 of 314 total aligned reads displayed.

GATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTA  >  NC_000913/4331948‑4332146

gcactctcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCaa                                                                                                       >  1:1438255‑M1/69‑100 (MQ=255)

     gCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                                  >  2:2505149/1‑100 (MQ=255)

     gCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                                  >  1:926095/1‑100 (MQ=255)

     ctccgccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                                  >  1:1178694‑M1/64‑100 (MQ=255)

      naGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                                 >  2:1210031/2‑100 (MQ=255)

      cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTAGCAGGCCAATTGaa                                                                                                  >  1:1637289/1‑99 (MQ=255)

       aGGCGAAACGTACCCGCCGGGTGCAGCAACCGCCGCGATGGGATGAATAAGCTGAAACGGATGGCCTGAGGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                                 <  1:2877795/99‑1 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                               <  2:8706/100‑1 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                               <  1:2776244/100‑1 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                               >  2:2190553/1‑100 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                               >  2:2593822/1‑100 (MQ=255)

         gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                              <  1:1616361/100‑1 (MQ=255)

          cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                             >  2:344850/1‑100 (MQ=255)

           gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                            >  2:744001/1‑100 (MQ=255)

            aaaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTaa                                                                                           <  2:1154314/100‑1 (MQ=255)

            aaaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTaa                                                                                           >  1:901662/1‑100 (MQ=255)

               cGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGt                                                                                        >  1:3029109/1‑100 (MQ=255)

                gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                       >  2:3353379/1‑100 (MQ=255)

                gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                       <  1:3057957/100‑1 (MQ=255)

                gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                       >  1:2491044/1‑100 (MQ=255)

                 tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                      >  1:1398299/1‑100 (MQ=255)

                   cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                    >  2:1851058/1‑100 (MQ=255)

                     cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACtt                                                                                  >  1:1971060/1‑100 (MQ=255)

                         tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                              >  2:3321909/1‑100 (MQ=255)

                         tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTCAAtc                                                                              >  1:2952572/1‑100 (MQ=255)

                           gTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtctc                                                                            <  2:1740741/100‑1 (MQ=255)

                           gTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtctc                                                                            <  2:2002110/100‑1 (MQ=255)

                            tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                           <  2:430322/100‑1 (MQ=255)

                             gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGCTGGCCTGATGTGACGCTGTGTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                          <  1:1889526/100‑1 (MQ=255)

                             gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                          <  2:264618/100‑1 (MQ=255)

                             gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                          <  1:1791757/100‑1 (MQ=255)

                               agcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                        <  2:899803/100‑1 (MQ=255)

                                gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                       >  2:10711/1‑100 (MQ=255)

                                gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                       >  1:276191/1‑100 (MQ=255)

                                   aCATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACgcgc                                                                    <  1:1330452/100‑1 (MQ=255)

                                    cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                                   <  1:626954/100‑1 (MQ=255)

                                     aTCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCAt                                                                  >  1:2069932/1‑100 (MQ=255)

                                       ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATa                                                                 <  2:2309616/99‑1 (MQ=255)

                                          cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActct                                                             >  1:1133092/1‑100 (MQ=255)

                                          cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActc                                                              <  1:2914801/99‑1 (MQ=255)

                                            aaTTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcc                                                           >  1:777079/1‑100 (MQ=255)

                                            aaTTGATGAATAAGCGGAAACCGATGGCCTGATGGTACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTCACGCGCATACTctcc                                                           <  1:3337480/100‑1 (MQ=255)

                                             aTTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcct                                                          >  1:2589309/1‑100 (MQ=255)

                                                gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                       >  1:2210386/1‑100 (MQ=255)

                                                 atgaATCATCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                      <  1:3154036/100‑1 (MQ=255)

                                                 atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                      >  2:1286591/1‑100 (MQ=255)

                                                  tgaATAAGCTGAAACGGATGGCCTGGTGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAAGCGCATACTGTCCTCCAgg                                                     <  1:1740885/100‑1 (MQ=255)

                                                  tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                     >  1:449213/1‑100 (MQ=255)

                                                  tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                     >  2:1943618/1‑100 (MQ=255)

                                                    aaTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGtt                                                   >  2:2577360/1‑100 (MQ=255)

                                                    aaTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGtt                                                   <  2:2816848/100‑1 (MQ=255)

                                                        aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                             <  2:3058206/100‑1 (MQ=255)

                                                        aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                             <  2:3148253/100‑1 (MQ=255)

                                                        aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                             <  1:1866368/100‑1 (MQ=255)

                                                          ccgAAACGGACGGCCCGATGTGACGCTGTCTTCTCCGGCCAATCGAACTCTTGAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCTGGTTAAc                                                >  1:2157848/3‑97 (MQ=255)

                                                          cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gga                                           >  2:3228441/1‑100 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                          >  1:855916/1‑100 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                          <  2:2376520/100‑1 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                         >  2:2023796/1‑100 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                         <  2:2989072/100‑1 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                         >  1:351388/1‑100 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                         <  2:1357934/100‑1 (MQ=255)

                                                             aaaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagga                                        >  1:2284724/1‑100 (MQ=255)

                                                                cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGagag                                     >  1:69649/1‑100 (MQ=255)

                                                                  gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTg                                   >  1:1239484/1‑100 (MQ=255)

                                                                   aTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGc                                  <  2:220729/100‑1 (MQ=255)

                                                                    TGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCa                                 <  1:1752393‑M1/100‑1 (MQ=255)

                                                                     ggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCaa                                >  2:65438‑M2/31‑100 (MQ=255)

                                                                      GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAAt                               <  2:362946‑M1/100‑1 (MQ=255)

                                                                       CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATg                              >  2:2094189‑M1/1‑100 (MQ=255)

                                                                         tgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaa                            >  2:2897009‑M2/27‑100 (MQ=255)

                                                                         TGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaa                            <  2:522550‑M1/100‑1 (MQ=255)

                                                                         TGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTAAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaa                            <  2:2434552‑M1/100‑1 (MQ=255)

                                                                          gATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatgcgcgtc                           <  2:1398311/100‑10 (MQ=21)

                                                                          GATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaa                           <  1:1502867‑M1/100‑1 (MQ=255)

                                                                          GATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaa                           <  1:1994939‑M1/100‑1 (MQ=255)

                                                                           ATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaa                          <  1:231544‑M1/100‑1 (MQ=255)

                                                                            TGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaaa                         <  1:2343537‑M1/100‑1 (MQ=255)

                                                                             gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAc                        <  1:47953/100‑1 (MQ=255)

                                                                              tgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAcc                       <  1:1943602/100‑1 (MQ=255)

                                                                               gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCGGACGCGCAGACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCg                      <  1:1011558/100‑1 (MQ=255)

                                                                                 ctcTGTCTTATCAGGCCAATTGAACTCTTAAGCTTCACTTAATCTCTGACGCGCATACTCTACTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCgt                     <  1:1191747/97‑1 (MQ=255)

                                                                                  gCTTTCTTATCAGGCCAATTGAACTCTTAAGGTTCATTTAATCTCTGACGCACATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCg                      <  1:3098957/97‑1 (MQ=255)

                                                                                  gCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCgtgt                   >  1:2050119/1‑100 (MQ=255)

                                                                                   cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGtt                  <  2:1801585/100‑1 (MQ=255)

                                                                                   cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGtt                  >  1:569444/1‑100 (MQ=255)

                                                                                   cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGtt                  >  1:3383035/1‑100 (MQ=255)

                                                                                     gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTa                >  1:530614/1‑100 (MQ=255)

                                                                                     gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGGTTa                >  1:2735270/1‑100 (MQ=255)

                                                                                      tCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTAt               >  1:1366343/1‑100 (MQ=255)

                                                                                       cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATg              >  1:2378027/1‑100 (MQ=255)

                                                                                        ttATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGa             <  1:2638981/100‑1 (MQ=255)

                                                                                         tATCAGACCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGaa            >  2:1499243/1‑100 (MQ=255)

                                                                                              ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt       >  2:3302297‑M2/6‑100 (MQ=255)

                                                                                              ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt       >  2:765497‑M2/6‑100 (MQ=255)

                                                                                               gccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAAAATAAAATAAAAAACCGTGTTTATGAAAGTTTa      <  1:3302273‑M2/96‑1 (MQ=255)

                                                                                                acaATTGCACACTTAAGGTTCACTTAATCTCTGACGCGCATACACTCCTACAGCTTAAC‑‑GGAGGAGAGTGCAATGAAACACCGTGTTTATGAAAGTTTaa     >  1:645088‑M2/4‑100 (MQ=255)

                                                                                                 caATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAc    <  2:926102‑M2/98‑1 (MQ=255)

                                                                                                   aTTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTa  >  1:2473045/1‑100 (MQ=255)

                                                                                                   aTTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTa  >  1:1056479/1‑100 (MQ=255)

GATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTA  >  NC_000913/4331948‑4332146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.