Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423821–3424234	3424599–3424238	5–779	74 [68]	[69] 72	[rrlD]	[rrlD]

ACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAA  >  NC_000913/3424553‑3424699                                                |                                                                                                     acacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                                                  <  2:165662/100‑1 (MQ=11) acacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt                                                  <  1:387973/100‑1 (MQ=11)  cacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                 <  1:2588904/100‑1 (MQ=31)  cacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                 >  1:1189818/1‑100 (MQ=31)    cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               >  1:1926965/1‑100 (MQ=33)    cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               <  1:961391/100‑1 (MQ=32)    cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               <  2:779764/100‑1 (MQ=32)     tGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                                              <  1:3349529/100‑1 (MQ=32)      gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                             >  2:2716257/1‑100 (MQ=33)      gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                             <  2:2669130/100‑1 (MQ=33)        ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt                                            <  1:2545732/99‑1 (MQ=33)         cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                          >  2:313686/1‑100 (MQ=33)          gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc                                         >  2:2493364/1‑100 (MQ=33)          gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc                                         <  1:212471/100‑1 (MQ=33)          gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc                                         >  1:249378/1‑100 (MQ=33)           cAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                        <  2:2668358/100‑1 (MQ=33)           cAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                        <  2:3362582/100‑1 (MQ=33)            aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                       <  2:1989882/100‑1 (MQ=33)             aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      <  2:376495/100‑1 (MQ=33)             aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      <  2:1728546/100‑1 (MQ=33)             aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      <  2:1969550/100‑1 (MQ=33)             aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      >  1:1381362/1‑100 (MQ=33)              cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt                                     >  2:862650/1‑100 (MQ=33)               gcGGATTACGGGTCAACGTTCGAACATCAAACATTAAAGGGTGGTATTCCAAGGTCGGCTCCATGCAGACTGCCGGCCACACTTCTAAGCCTccc                                         >  2:245783/2‑95 (MQ=11)               ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTCTTTCAAGGGCGGATCAATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa                                    >  2:494334/1‑100 (MQ=11)               ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa                                    <  2:664130/100‑1 (MQ=33)               ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa                                    >  2:1361036/1‑100 (MQ=33)                 ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑Tc                                 <  2:1965041/100‑1 (MQ=33)                 ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑Tc                                 <  2:264017/100‑1 (MQ=33)                 ggAGTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑Tc                                 <  2:2060010/100‑1 (MQ=17)                  gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACCTCTAAGCCTCCCACCTA‑Tcc                                <  1:2119120/100‑1 (MQ=18)                   aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTGCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTC‑TCCt                               >  1:2209596/1‑100 (MQ=12)                    ttACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTa                              <  2:1371121/100‑1 (MQ=33)                     tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTac                             <  1:745822/100‑1 (MQ=33)                     tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTac                             <  1:1669378/100‑1 (MQ=32)                     tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTac                             <  2:2064937/100‑1 (MQ=33)                      aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCTACCTA‑TCCTaca                            <  2:2270742/100‑1 (MQ=18)                       cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTTCACACTTCTAAGCCTCCCCCCTA‑TCCTacac                           <  1:67770/100‑1 (MQ=12)                        gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTAcaca                          >  2:149412/1‑100 (MQ=32)                         ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACAt                         >  2:2518711/1‑100 (MQ=33)                         ggTCAACGTTAGAACATCAAACATTAAAGGGT‑GTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATc                        >  1:2640111/1‑100 (MQ=17)                          gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATc                        >  1:3198867/1‑100 (MQ=33)                          gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATc                        <  2:2968254/100‑1 (MQ=33)                           tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCa                       <  2:658210/100‑1 (MQ=33)                            cAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCaa                      <  2:1782049/100‑1 (MQ=33)                              aCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAgg                    <  2:2937570/100‑1 (MQ=33)                               cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAgg                    >  2:2867445/1‑99 (MQ=33)                               cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGc                   <  2:1526664/100‑1 (MQ=33)                                nttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCt                  >  1:2569434/2‑100 (MQ=18)                                gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGGCGGCTCCATGCAGACTGGCGGCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCt                  >  1:1020476/1‑100 (MQ=16)                                 ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTc                 <  2:1275140/100‑1 (MQ=33)                                  tAGAACATCACACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCa                <  1:2268511/100‑1 (MQ=17)                                  tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCa                <  1:1225976/100‑1 (MQ=32)                                  tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCa                <  2:17206/100‑1 (MQ=33)                                  tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCa                <  2:2900140/100‑1 (MQ=33)                                   aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCaa               >  2:1904565/1‑100 (MQ=33)                                   aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCaa               <  2:3182454/100‑1 (MQ=33)                                    gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAAt              >  1:3253145/1‑100 (MQ=33)                                    gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAAt              >  2:2896216/1‑100 (MQ=33)                                       cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGtt           >  2:1866845/1‑100 (MQ=33)                                        aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTc          >  2:221915/1‑100 (MQ=33)                                         tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCTTTTAAACGTC‑AAGCCCACCCCCGAGATCTACACATCAAGGCTCAATGTTcn         <  1:1858255/100‑2 (MQ=0)                                         tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCa         >  2:2526262/1‑100 (MQ=33)                                          cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAg        >  1:3422531/1‑100 (MQ=33)                                          cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAg        >  2:830446/1‑100 (MQ=33)                                          cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAg        <  1:1155374/100‑1 (MQ=33)                                           aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAgt       >  1:2664186/1‑100 (MQ=33)                                           aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAgt       >  2:2045531/1‑100 (MQ=33)                                             aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAgtgt     >  1:3311726/1‑100 (MQ=33)                                               tttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCa   <  2:1804550/99‑1 (MQ=18)                                                ttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCaa  <  2:2602276/100‑1 (MQ=33)                                                ttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCaa  >  1:1804534/1‑100 (MQ=33)                                                |                                                                                                     ACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTA‑TCCTACACATCAAGGCTCAATGTTCAGTGTCAA  >  NC_000913/3424553‑3424699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑