| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 236,569 | C→T | 40.2% | A168V (GCC→GTC) | dnaQ → | DNA polymerase III epsilon subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 236,569 | 0 | C | T | 40.2% | 106.4 / 161.9 | 144 | A168V (GCC→GTC) | dnaQ | DNA polymerase III epsilon subunit |
| Reads supporting (aligned to +/- strand): ref base C (41/45); new base T (32/26); total (73/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
GGAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGCAAC > NC_000913/236470‑236668 | ggAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGc < 2:266813/100‑1 (MQ=255)ggAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGc > 2:3081582/1‑100 (MQ=255)ggAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGc < 2:3171981/100‑1 (MQ=255) aTGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGa > 2:271520/1‑100 (MQ=255) tCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCtt > 1:2995071/1‑100 (MQ=255) cccGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTg < 1:3299482/100‑1 (MQ=255) cccGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTg > 1:243207/1‑100 (MQ=255) ccGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGCTCCCCAGATCCTTGc > 2:2015008/1‑100 (MQ=255) ccGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGc < 1:561029/100‑1 (MQ=255) gTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGa < 2:2608009/100‑1 (MQ=255) aGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGt > 2:502659/1‑100 (MQ=255) gcgcAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGtt > 1:848032/1‑100 (MQ=255) gcgcAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGtt < 1:956145/100‑1 (MQ=255) gcAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTa > 1:973101/1‑100 (MQ=255) gcAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTa < 1:2956284/100‑1 (MQ=255) cAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTAt > 1:1172223/1‑100 (MQ=255) cAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTg < 1:2026445/100‑1 (MQ=255) gCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑Gc > 1:1010678/1‑100 (MQ=255) ccTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCg > 2:3458671/1‑100 (MQ=255) ccTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCg > 2:686191/1‑100 (MQ=255) cTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGa < 2:271938/100‑1 (MQ=255) cTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGa < 2:266588/100‑1 (MQ=255) tCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTCCTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGa < 1:1849214/99‑1 (MQ=255) cGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATg > 1:1714505/1‑100 (MQ=255) gATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGa > 1:3057647/1‑100 (MQ=255) cGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCgg > 2:2369799/1‑100 (MQ=255) gTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCgct < 2:3202015/100‑3 (MQ=255) tATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCggtgg < 1:1975521/100‑1 (MQ=255) tATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCggtgg < 1:3299004/100‑1 (MQ=255) tgtgCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTc > 1:1613226/1‑100 (MQ=255) tgtgCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTc > 2:380005/1‑100 (MQ=255) tgtgCTCGCTACGAAACAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTc < 1:2029681/100‑1 (MQ=255) tgCTCGCTACGAAATAGATAACAGTAAAGGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCaa < 2:653598/100‑1 (MQ=255) tgCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCaa > 2:249063/1‑100 (MQ=255) tgCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCaa > 1:3284049/1‑100 (MQ=255) tgCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCaa > 1:3284469/1‑100 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc > 1:350518/1‑100 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc > 2:406598/1‑100 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc > 2:1776988/1‑100 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc > 1:1558438/1‑100 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc < 2:781131/100‑1 (MQ=255) cTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATGACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAAc > 2:1998818/1‑100 (MQ=255) tCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACg > 1:1175263/1‑100 (MQ=255) tCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACg < 2:2623338/100‑1 (MQ=255) tCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACg < 1:2753189/100‑1 (MQ=255) cGCTACGAAATAGATAACAGTAAACGAACGCTGCCCGGGGCATTACTCGATGTCCAGATCGTTGCGGAAGTTTATCTG‑GCGCTGACCGTTGGCCa > 1:2639227/1‑95 (MQ=255) gCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTc < 1:3147258/100‑1 (MQ=255) cTACGAAATAGATAACAGTAAACGAACGCTTCAAGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCg > 1:2268218/1‑100 (MQ=255) cTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCg > 2:2618470/1‑100 (MQ=255) cTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCg < 2:2258099/100‑1 (MQ=255) cTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACCCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCg < 2:2502151/100‑1 (MQ=255) cGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATg > 2:1410051/1‑100 (MQ=255) tAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCttt > 2:1235570/1‑100 (MQ=255) gATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTg < 1:2044039/100‑1 (MQ=255) atcaCAGTAAACGAACGCTGCACGGGGCATTACGCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCCAACGTCGATGGCTTTTGc < 2:3434249/97‑1 (MQ=255) aCAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGAt > 1:313257/1‑100 (MQ=255) aCAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGAt > 1:2609001/1‑100 (MQ=255) aCAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGAt < 2:3346704/100‑1 (MQ=255) cAGTAAACGAACGCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATg > 1:3255866/1‑100 (MQ=255) aGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATgg > 1:3048123/1‑100 (MQ=255) aGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATgg < 2:243209/100‑1 (MQ=255) aaaCGAACGCTGCACGGGGCATTACTCGATGTCCAGATACTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAg > 1:2132849/1‑100 (MQ=255) aacgaacgCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAgg < 2:2028445/100‑1 (MQ=255) acgaacgCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGga < 2:2787699/100‑1 (MQ=255) acgaacgCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGga < 2:2033678/100‑1 (MQ=255) cgaacgCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGgag < 2:2377039/100‑1 (MQ=255) cgaacgCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGgag > 1:1739872/1‑100 (MQ=255) acgCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGgagaga > 1:3163867/1‑100 (MQ=255) acgCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGgagaga > 2:42146/1‑100 (MQ=255) acgCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGgagaga > 2:2975987/1‑100 (MQ=255) cgCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGac < 2:2958945/100‑1 (MQ=255) gCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGaca < 2:835445/100‑1 (MQ=255) gCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGaca < 1:247212/100‑1 (MQ=255) gCTGCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGaca > 2:2289451/1‑100 (MQ=255) gCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGaca > 2:2927727/1‑100 (MQ=255) cTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGacac > 1:1287681/1‑100 (MQ=255) gCACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaa > 2:2752191/1‑100 (MQ=255) cACGGGGCATTACTCGATGTCCAGATCCTTGCGGCAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaac < 1:1829213/100‑1 (MQ=255) cACGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaac < 2:147434/100‑1 (MQ=255) cACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaac < 2:168768/100‑1 (MQ=255) aCGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaaca > 2:647249/1‑100 (MQ=255) aCGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGATTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACacaaca > 2:2437094/1‑100 (MQ=255) ccgggAATTACTCTGTGTCCAGATCTCTGCTTAAGTTTA‑CTGAGCCAGGACCGGGGGTCAAACGTCGATGTCTTTTACGATATAAGGAGAGACacaaca < 1:1433739/97‑1 (MQ=255) cGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAg > 1:707337/1‑100 (MQ=255) cGGGGCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAg < 1:2317863/100‑1 (MQ=255) cGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAg < 2:1901400/100‑1 (MQ=255) ggggCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGc > 1:2726300/1‑100 (MQ=255) gggCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGca > 2:1200488/1‑100 (MQ=255) gggCATTACTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGca < 2:1845385/100‑1 (MQ=255) gCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGcaac < 2:1714521/100‑1 (MQ=255) aTTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGcaacaa < 2:1739888/100‑1 (MQ=255) tACTCGATGTCCAGATCCTTGCGGAAGTTTATCTT‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAAGAAgg > 1:796250/1‑100 (MQ=255) aCTCGATGTCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGt > 1:1980589/1‑100 (MQ=255) aCTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGt > 2:1024939/1‑100 (MQ=255) gATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAg < 1:502655/100‑1 (MQ=255) gATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAg < 2:3268323/100‑1 (MQ=255) aTGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGc < 1:604892/100‑1 (MQ=255) aTGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGc < 2:2608433/100‑1 (MQ=255) aTGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGc < 1:1032883/100‑1 (MQ=255) cccAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGcaac > 2:1505232/1‑100 (MQ=255) | GGAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTG‑GCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGCAAC > NC_000913/236470‑236668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |