| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,618,765 | T→C | 25.3% | Y60H (TAT→CAT) | nikR → | transcriptional repressor, Ni‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,618,765 | 0 | T | C | 25.3% | 246.3 / 95.6 | 142 | Y60H (TAT→CAT) | nikR | transcriptional repressor, Ni‑binding |
| Reads supporting (aligned to +/- strand): ref base T (42/64); new base C (15/21); total (57/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.21e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
ACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACG > NC_000913/3618667‑3618864 | acCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTa < 1:2478132/100‑1 (MQ=255) cagTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCACAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTAt > 2:2337601/3‑100 (MQ=255) cGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATg < 2:1284593/100‑1 (MQ=255) cGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAacac > 2:449047/1‑100 (MQ=255) cGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAacac < 2:2119747/100‑1 (MQ=255) aGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaa < 2:948942/100‑1 (MQ=255) aGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaa < 2:3071389/100‑1 (MQ=255) cTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaata < 2:2341930/100‑3 (MQ=255) cTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaaaa < 2:793575/100‑1 (MQ=255) cTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGaaaa < 2:2832643/100‑1 (MQ=255) tATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaaaaa > 1:1559474/1‑100 (MQ=255) tATCCGCGACATTCTGCGTAGCGCCCGGGCGGAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGaaaa < 1:674541/99‑1 (MQ=255) tCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcg < 2:2079265/100‑1 (MQ=255) ccGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgc < 2:2121888/100‑1 (MQ=255) ccGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgc > 1:1468420/1‑100 (MQ=255) ccGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgc < 2:1694094/100‑1 (MQ=255) cgcgACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgcg < 2:2717786/100‑1 (MQ=255) cgcgACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgcg > 2:1170452/1‑100 (MQ=255) cgcgACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAAcgcg > 2:38726/1‑100 (MQ=255) cgcgACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAAcgcg > 1:3077126/1‑100 (MQ=255) cgACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGAc > 2:1855401/1‑100 (MQ=255) aTTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTag > 2:2233094/1‑100 (MQ=255) ttCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagc < 1:2631229/100‑1 (MQ=255) ttCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTagc > 2:1546378/1‑100 (MQ=255) tCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTagcc < 2:2614627/100‑1 (MQ=255) cTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagcca < 1:1947564/100‑1 (MQ=255) cTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTagcca > 2:130016/1‑100 (MQ=255) tGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagccag > 1:1059877/1‑100 (MQ=255) gCGTAGCGCCCTGGCGCAAGAGGCCCCCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagccagc < 2:2760257/100‑1 (MQ=255) cGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagccagcc < 2:672092/100‑1 (MQ=255) cGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTagccagcc > 1:376788/1‑100 (MQ=255) gTAGCGGCCTGGCGCAAGAGGCCACGCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATAAACACGAAAAACGCGACTTAGCCAGCCg < 1:3169759/100‑1 (MQ=255) gTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCg > 2:772324/1‑100 (MQ=255) tAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGc < 1:1220730/100‑1 (MQ=255) aGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCa > 2:2293721/1‑100 (MQ=255) gcgcCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCACGGTTTCGCGGGGCTGTGGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCAt > 2:3370811/1‑100 (MQ=255) gcgcCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCAt > 1:186091/1‑100 (MQ=255) cgcCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCAtt < 1:2879101/100‑1 (MQ=255) gcCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTg < 1:1095764/100‑1 (MQ=255) gcCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTg < 1:2764417/100‑1 (MQ=255) cccTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGt > 1:2851468/1‑100 (MQ=255) ccTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGtc > 1:1366000/1‑100 (MQ=255) cTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGtct < 1:1081972/100‑1 (MQ=255) cTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGtct > 2:2358481/1‑100 (MQ=255) cTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGtct > 2:1684732/1‑100 (MQ=255) ggCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTcc > 2:3065929/1‑100 (MQ=255) ggCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTcc < 1:3308038/100‑1 (MQ=255) gcgcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCa < 2:2224179/100‑1 (MQ=255) cgcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAc > 2:1797711/1‑100 (MQ=255) cgcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAc > 2:309728/1‑100 (MQ=255) cgcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAc < 2:2872003/100‑1 (MQ=255) cgcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTACTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAc < 1:2214010/100‑1 (MQ=255) cgcAAGAGCCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAc < 1:3287863/100‑1 (MQ=255) gcAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAcc < 1:2567480/100‑1 (MQ=255) cAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAccc > 2:1971512/1‑100 (MQ=255) agagGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAg < 2:1239272/100‑1 (MQ=255) gagGCCACCCAGCAGCGCGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCAccc < 1:1445897/97‑1 (MQ=255) agGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGca < 1:2786303/100‑1 (MQ=255) agGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGACAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGca < 1:2126916/100‑1 (MQ=255) ggCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGcat > 1:1189200/1‑100 (MQ=255) ccACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGcatca > 1:3187404/1‑100 (MQ=255) cagcagCGCGGCACGGAAGGTTGAGCGGGGATGTCGTATCTGCATGAACACCAAACACGCGACTTAGCCAGCCGCATTGTCTCCCCCCCGca < 1:2064881/92‑1 (MQ=255) gcagcaCGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATcaccac < 1:1695591/100‑1 (MQ=255) agcaCGGCACACAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATcaccac < 1:237416/98‑1 (MQ=255) gcacggcacgCAAGGTTTCGCGGTGCTGTCGTATGTGTATGTACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGAc < 2:483213/100‑1 (MQ=255) gcacggcacgCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGAc < 2:114241/100‑1 (MQ=255) gcacggcacgCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCAAGCCGCATTGTCTCCACCCAGCATCATCACCACGAc > 1:1132055/1‑100 (MQ=255) gcacgCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCtctc < 2:2523948/100‑1 (MQ=255) gcacgCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCtctc < 1:2358462/100‑1 (MQ=255) gcacgCAAGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCtctc < 1:130016/100‑1 (MQ=255) aaGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGc < 1:752765/100‑1 (MQ=255) aaGGTTTCGCGGTGCTGTCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGc < 1:2606537/100‑1 (MQ=255) aGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGcc > 2:2838220/1‑100 (MQ=255) aGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGcc > 2:2716261/1‑100 (MQ=255) ggTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCa > 2:925802/1‑100 (MQ=255) ggTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCa > 1:1518543/1‑100 (MQ=255) gTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCAc > 2:1521218/1‑100 (MQ=255) gTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCAc > 2:3350209/1‑100 (MQ=255) tCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCt < 1:968720/100‑1 (MQ=255) cgcgGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTg < 1:1040086/100‑1 (MQ=255) cgGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCa < 1:3014049/100‑1 (MQ=255) cgGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCa < 2:3313562/100‑1 (MQ=255) cTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGc < 2:3432984/100‑1 (MQ=255) tGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGca < 2:2832068/100‑1 (MQ=255) tGTCGTATGCGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATTACCACGACCTCTCCGTCGCCACGCTGCATGTGc < 1:2268242/99‑1 (MQ=255) ntCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGcac > 1:1119373/2‑100 (MQ=255) tCGTATGTGCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGcaca < 2:2766853/100‑1 (MQ=255) cGTATGTGTATGAACACGAAAAGCGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACAt < 1:2337582/100‑1 (MQ=255) cGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGcaca < 2:586373/99‑1 (MQ=255) cGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACAt < 2:2064333/100‑1 (MQ=255) tATGTGTATGAACACG‑AAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCaa < 1:151785/100‑1 (MQ=255) aTGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGTATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCaa > 1:1857525/1‑100 (MQ=255) aTGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATcga > 1:2100861/1‑98 (MQ=255) tgtgTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAAc > 1:3418232/1‑100 (MQ=255) tgtgCATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAAc > 2:1201247/1‑100 (MQ=255) gtgtATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAAcc < 1:614344/100‑1 (MQ=255) gtgcATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAAcc > 1:595628/1‑100 (MQ=255) tgtATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCa > 1:1155992/1‑100 (MQ=255) tgtATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCa > 2:2667251/1‑100 (MQ=255) tATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCacg > 2:197998/1‑100 (MQ=255) | ACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACG > NC_000913/3618667‑3618864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |