| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,851,014 | C→T | 41.9% | G27S (GGC→AGC) | ilvN ← | acetolactate synthase 1 small subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,851,014 | 0 | C | T | 41.9% | 88.5 / 175.8 | 147 | G27S (GGC→AGC) | ilvN | acetolactate synthase 1 small subunit |
| Reads supporting (aligned to +/- strand): ref base C (44/41); new base T (38/23); total (82/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
GGTCGTCATTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCCCACCATTTC > NC_000913/3850915‑3851113 | ggTCGTCATTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGcc < 2:2652825/100‑1 (MQ=255) tcgtcATTGACCAGTAGCCAGATATGGCTTTTTTCGCTGTCCTGAATCGGCCGACAAAGAATGCCTTCAACGATAAAAGCGCGGCGGGCAAAAAGGCaac > 1:1658695/1‑100 (MQ=255) cgtcATTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCcaca > 1:2782333/1‑100 (MQ=255) cgtcATTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCcaca > 1:1531610/1‑100 (MQ=255) aTTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAAGGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCGACAAACg < 1:1760337/100‑1 (MQ=255) tGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTg < 2:1204109/100‑1 (MQ=255) tGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTg < 1:124717/100‑1 (MQ=255) gACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTgg < 1:288272/100‑1 (MQ=255) gACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTgg < 2:1321093/100‑1 (MQ=255) aCCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTggg < 2:542371/100‑1 (MQ=255) cAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTc > 1:2568779/1‑100 (MQ=255) aGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCa < 2:1623866/100‑1 (MQ=255) aGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCa < 2:412011/100‑1 (MQ=255) gTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCAt > 1:100015/1‑100 (MQ=255) gTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCAt > 2:2856580/1‑100 (MQ=255) tAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCAtt < 1:2709213/100‑1 (MQ=255) gCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTAc < 1:2439857/100‑1 (MQ=255) gCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTAc > 2:2620942/1‑100 (MQ=255) aGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGcc < 1:3417900/100‑1 (MQ=255) gATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGccc < 2:224169/100‑1 (MQ=255) gATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGccc < 1:2923389/100‑1 (MQ=255) tatGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCgg < 1:3302957/100‑1 (MQ=255) tatGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCgg > 1:2102409/1‑100 (MQ=255) tatGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCg < 2:1594606/99‑1 (MQ=255) atGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGa > 1:2727360/1‑100 (MQ=255) ttttGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGtt > 1:187912/1‑100 (MQ=255) ttGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGc < 2:146177/100‑1 (MQ=255) tGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCg > 1:1514728/1‑100 (MQ=255) gTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAACGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCAGGATGGTTGCg < 2:1506760/99‑1 (MQ=255) gTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCg < 1:1694232/99‑1 (MQ=255) cGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAAc < 2:3160506/100‑1 (MQ=255) cGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAAc > 1:676743/1‑100 (MQ=255) tGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGt < 1:1559807/100‑1 (MQ=255) gTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACg > 1:320786/1‑97 (MQ=255) gTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTg < 1:606799/100‑1 (MQ=255) gTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTg < 2:2140421/100‑1 (MQ=255) tCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGa < 2:3091597/100‑1 (MQ=255) ccTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAg > 1:1479731/1‑100 (MQ=255) cTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGc < 1:896307/100‑1 (MQ=255) cTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGc < 2:2378423/100‑1 (MQ=255) tGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAgat > 2:677100/1‑98 (MQ=255) tGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCt > 2:1009709/1‑100 (MQ=255) aaTCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTcc > 2:2534825/1‑100 (MQ=255) aTCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCa < 1:228867/100‑1 (MQ=255) cGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGa > 2:2030288/1‑100 (MQ=255) ggCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGaa < 1:571958/100‑1 (MQ=255) ggCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGaa > 2:1053077/1‑100 (MQ=255) ggCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGaa > 1:2227808/1‑100 (MQ=255) ggCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGaa > 1:1179535/1‑100 (MQ=255) gCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAAt > 1:2770903/1‑100 (MQ=255) cAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAAtt > 1:576374/1‑100 (MQ=255) cAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAAtt > 2:2170839/1‑100 (MQ=255) aGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTa > 1:619110/1‑100 (MQ=255) aGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTa < 1:623833/100‑1 (MQ=255) aGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTa > 1:2958895/1‑100 (MQ=255) gACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTAc > 2:1421502/1‑100 (MQ=255) gAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTc < 1:3280241/100‑1 (MQ=255) aaTGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTc > 1:1104158/1‑99 (MQ=255) tGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATg < 1:307125/100‑1 (MQ=255) ccTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAg < 2:576378/100‑1 (MQ=255) ccTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAg > 2:3380045/1‑100 (MQ=255) cTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGt > 1:2241005/1‑100 (MQ=255) cTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGt > 1:1851806/1‑100 (MQ=255) ttCAACGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGt > 2:875905/1‑99 (MQ=255) tCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGCCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTtg > 2:457538/1‑100 (MQ=255) naCGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCGCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTtgtg > 1:3398275/2‑100 (MQ=255) aaCGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTtgtg > 2:2323387/1‑100 (MQ=255) aCGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTgtgt > 1:1003837/1‑100 (MQ=255) cGTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGtt > 1:2705072/1‑100 (MQ=255) gTTAAAAGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGttt < 1:403177/100‑1 (MQ=255) gTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGttt > 1:1094266/1‑100 (MQ=255) aaaaGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGc < 2:58691/100‑1 (MQ=255) aaaGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCa > 2:1964250/1‑100 (MQ=255) aaaGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCa > 2:1563239/1‑100 (MQ=255) aaGCGCGGCGGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCAt < 1:1589316/100‑1 (MQ=255) aGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATg > 2:816268/1‑100 (MQ=255) gcggcgGGCAAAAAGTCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGc < 1:2416677/99‑1 (MQ=255) gcggcgGGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCt < 2:3298336/100‑1 (MQ=255) gcggcgGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCt < 2:1882543/100‑1 (MQ=255) cggcggGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCtt > 2:3070391/1‑100 (MQ=255) ggcggGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTa > 1:1016409/1‑100 (MQ=255) ggcggGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTa < 1:1197063/100‑1 (MQ=255) gcggGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTAt > 2:912831/1‑100 (MQ=255) gcggGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTAt < 1:2039537/100‑1 (MQ=255) cggGCAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTAtt > 1:354303/1‑100 (MQ=255) ggCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTcc < 2:2102426/100‑1 (MQ=255) ggCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTcc > 2:1113638/1‑100 (MQ=255) gCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTccc > 2:246631/1‑100 (MQ=255) gCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTccc < 2:3355587/100‑1 (MQ=255) cAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTcccc > 2:1605070/1‑100 (MQ=255) cAAAAAGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTcccc > 1:3199786/1‑100 (MQ=255) cAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTcccc > 2:726456/1‑100 (MQ=255) aaaaaGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTccccc < 2:2820612/100‑1 (MQ=255) aaaaGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCcca > 2:1063302/1‑100 (MQ=255) aaaaGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCcca < 1:2620923/100‑1 (MQ=255) aaGGCTACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCccacc > 2:3401521/1‑100 (MQ=255) ggCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTCCGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCCCACCAt > 1:1015434/1‑100 (MQ=255) ggCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTTATGAGTTGTGTTTTGCATGGCTTATTCCCcca < 1:677096/96‑1 (MQ=255) ggCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCCCACCAt > 1:1903777/1‑100 (MQ=255) cacaAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCCCACCATTTc < 1:3380020/100‑1 (MQ=255) | GGTCGTCATTGACCAGTAGCCAGATATGGCTTTTGTCGCTGTCCTGAATCGGCAGACAAAGAATGCCTTCAACGTTAAAAGCGCGGCGGGCAAAAAGGCCACAAACGTGGGTCATTACGCCCGGATGGTTGCGAACGGTGAGCTCCAGAATTACGTTGTCATGAGTTGTGTTTTGCATGGCTTATTCCCCCACCATTTC > NC_000913/3850915‑3851113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |