| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3328172 = | 124 (1.140) | 7 (0.070) | 6/178 | 12.4 | 5.8% | intergenic (+89/+67) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor |
| ? | NC_000913 | 3328195 = | 115 (1.170) | intergenic (+112/+44) | yhbY/greA | RNA binding protein associated with pre‑50S ribosomal subunits/transcript cleavage factor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3328280‑3328172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccttttTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG > NC_000913/3328195‑3328293 GGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATG < 1:2757389/100‑1 GCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGC > 2:2330078/1‑100 CGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGG‑AAAAGGCCGCTATGCGn < 2:589151/100‑2 AGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCC < 2:2315027/100‑1 AGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT < 2:1821630/100‑1 AGAATTTGAAGTAATTAAGGCGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTT > 2:1685862/1‑100 GAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT > 1:58213/1‑100 GAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT < 2:198908/100‑1 CAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTAC > 1:370504/1‑100 CAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTA > 1:2146787/1‑99 GTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTAT > 2:1387681/1‑100 TAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATT < 1:1387690/100‑1 AGAAAGGAAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCCCCTTAATTACT > 2:473623/1‑100 AAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTTGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTC > 2:73597/1‑100 AAAGGCCGCTATGCGGCTTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCT < 2:370500/100‑1 GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCC > 1:1521816/1‑100 GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCC < 1:856678/100‑1 GCGGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCC > 1:633868/1‑100 GGCCTTTTTCCTTTCTTTACAATACATCAACATCTTGAATATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGG > 2:1701628/1‑100 CCTTTTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCG < 1:832493/100‑1 TTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTT < 2:1323105/100‑1 TTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTT > 2:582585/1‑100 TTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTT < 1:169109/100‑1 TTTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTT < 2:825613/100‑1 TTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG < 2:2146770/100‑1 TTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG < 1:473627/100‑1 GGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAAGAATTACCCAATACTCAAGATGTTGATGTATTGTAAAGAAAGGAAAAAGGCCGCTATGCGGCCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3328280‑3328172‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccttttTCCTTTCTTTACAATACATCAACATCTTGAGTATTGGGTAATTCTTACAGGTATTCCACCTTAATTACTTCAAATTCTACTTCGCCGCCCGGCGTTTTG > NC_000913/3328195‑3328293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |