New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3136613 =164 (1.500)9 (0.100) 5/168 12.6 6.1% intergenic (‑242/+50) pitB/gss phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase
?NC_000913 3136648 = 139 (1.500)intergenic (‑277/+15) pitB/gss phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 167 total aligned reads displayed.

TAGAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATGA  >  NC_000913/3136516‑3136712
                                                                                                 |                                                                                                   
tAGAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATccc                                                                                                   <  2:353641/100‑1 (MQ=255)
 aGAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATcccc                                                                                                  >  2:2721070/1‑100 (MQ=255)
  gAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATcccc                                                                                                  >  2:2020278/1‑99 (MQ=255)
  gAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATcccc                                                                                                  >  2:31571/1‑99 (MQ=255)
  gAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCg                                                                                                 <  1:361527/100‑1 (MQ=255)
   aaaTAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGt                                                                                                >  1:398719/1‑100 (MQ=255)
    aataatCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTa                                                                                               <  1:621262/100‑1 (MQ=255)
      taatCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACt                                                                                             >  2:228285/1‑100 (MQ=255)
      taatCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACt                                                                                             >  2:2098378/1‑100 (MQ=255)
      taatCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACt                                                                                             <  2:1605254/100‑1 (MQ=255)
       aatCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTg                                                                                            >  1:2209904/1‑100 (MQ=255)
        atCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGa                                                                                           >  2:202780/1‑100 (MQ=255)
         tCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGat                                                                                          <  1:53488/100‑1 (MQ=255)
         tCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGat                                                                                          <  1:1359368/100‑1 (MQ=255)
         tCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGat                                                                                          >  2:1647959/1‑100 (MQ=255)
          cAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGatt                                                                                         >  1:95824/1‑100 (MQ=255)
          cAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGatt                                                                                         <  1:205643/100‑1 (MQ=255)
               cacaGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAttct                                                                                    >  2:1050022/1‑100 (MQ=255)
               cacaGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAttct                                                                                    >  2:2408047/1‑100 (MQ=255)
                acaGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAttctt                                                                                   <  2:731188/100‑1 (MQ=255)
                 caGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAttcttc                                                                                  <  1:1647972/100‑1 (MQ=255)
                 caGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTAttcttc                                                                                  <  1:797397/100‑1 (MQ=255)
                  agatATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCa                                                                                 <  2:690145/97‑1 (MQ=255)
                  aGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCa                                                                                 <  1:1511463/100‑1 (MQ=255)
                   ggTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCAt                                                                                >  2:970678/1‑100 (MQ=255)
                    gTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATa                                                                               <  1:775836/100‑1 (MQ=255)
                     tATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATaa                                                                              >  2:2322341/1‑100 (MQ=255)
                     tATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATaa                                                                              <  1:2128328/100‑1 (MQ=255)
                       ttCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATc                                                                            >  1:2641691/1‑100 (MQ=255)
                         cgaCTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAg                                                                          >  1:1859874/3‑100 (MQ=255)
                         ccACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAg                                                                          >  1:2078274/1‑100 (MQ=255)
                         ccACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAg                                                                          >  1:54294/1‑100 (MQ=255)
                           aCTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTa                                                                        <  1:2244318/100‑1 (MQ=255)
                                 tAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGt                                                                  <  1:1465362/100‑1 (MQ=255)
                                   atatatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTg                                                                <  1:216773/100‑1 (MQ=255)
                                   atatatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTg                                                                >  1:2050692/1‑100 (MQ=255)
                                    tatatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGc                                                               <  1:1008561/100‑1 (MQ=255)
                                    tatatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGc                                                               >  2:2717347/1‑100 (MQ=255)
                                     atatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCt                                                              >  2:869618/1‑100 (MQ=255)
                                     atatTCACATATGAAATGAATAAATATTCGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGc                                                               <  2:266146/99‑1 (MQ=255)
                                      tatTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTa                                                             >  1:174024/1‑100 (MQ=255)
                                        ttCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTaca                                                           <  2:2634830/100‑1 (MQ=255)
                                        ttCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTaca                                                           <  1:1094466/100‑1 (MQ=255)
                                          cacaTATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTacaac                                                         >  2:2394726/1‑100 (MQ=255)
                                          cacaTATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTacaac                                                         >  1:1975357/1‑100 (MQ=255)
                                          cacaTATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTacaa                                                          >  2:1781001/1‑99 (MQ=255)
                                           acaTATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTacaaca                                                        <  2:2125485/100‑1 (MQ=255)
                                            caTATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACAt                                                       >  1:1230083/1‑100 (MQ=255)
                                             atatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATg                                                      <  1:1303259/100‑1 (MQ=255)
                                             atatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATg                                                      <  1:754865/100‑1 (MQ=255)
                                             atatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATg                                                      >  1:2130399/1‑100 (MQ=255)
                                             atatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATg                                                      <  2:1074094/100‑1 (MQ=255)
                                              tatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGt                                                     <  2:1790492/100‑1 (MQ=255)
                                              tatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGt                                                     <  2:1988498/100‑1 (MQ=255)
                                              tatGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGt                                                     >  1:1994927/1‑100 (MQ=255)
                                               atgaaatgaaTAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTa                                                    <  1:388355/100‑1 (MQ=255)
                                                 gaaatgaaTAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTAtt                                                  <  1:2286075/100‑1 (MQ=255)
                                                    atgaaTAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACt                                               >  1:726009/1‑100 (MQ=255)
                                                      gaaTAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACttt                                             >  2:213487/1‑100 (MQ=255)
                                                       aataaataTTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACtttt                                            >  1:2232102/1‑100 (MQ=255)
                                                       aataaataTTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACtttt                                            <  1:1319053/100‑1 (MQ=255)
                                                        ataaataTTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACttttt                                           >  1:1041663/1‑100 (MQ=255)
                                                           aataTTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGTGTTTCTACAACATGTATTACTTTTTcac                                        >  2:28630/1‑100 (MQ=255)
                                                           aataTTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTcac                                        >  1:993323/1‑100 (MQ=255)
                                                            atatTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGCTTCTTCTTCATAATCAGTACGGGGCTGCTACAACATGTATTACttttt                                           >  1:2472795/1‑96 (MQ=255)
                                                            atatTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTcacc                                       <  2:2209886/100‑1 (MQ=255)
                                                            atatTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTcacc                                       <  1:230319/100‑1 (MQ=255)
                                                             tatTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTcacca                                      <  1:1244433/100‑1 (MQ=255)
                                                              atTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTcaccac                                     >  2:944082/1‑100 (MQ=255)
                                                                 ggAATATATAAATATTGAATATTTTGATTAATCCCCGTACTAATTATTCTTCATAATAAGTAAGGCGTTGCTACAACATGTATTACTTTTTCACCACAAt                                  >  2:2624037/1‑100 (MQ=255)
                                                                  gAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAAtt                                 <  1:2098395/100‑1 (MQ=255)
                                                                   aaTATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTa                                <  2:2242692/100‑1 (MQ=255)
                                                                   aaTATATAAATATTGAATATTTTGAGTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTGTTCACCACAATTa                                <  2:768216/100‑1 (MQ=255)
                                                                     tatataAATATTGAATATTTTGATTAATCCTCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAAtt                                 >  2:682114/1‑97 (MQ=255)
                                                                     tatataAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAAc                              <  1:2721089/100‑1 (MQ=255)
                                                                      atataAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACg                             <  1:1403661/100‑1 (MQ=255)
                                                                      atataAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACg                             <  1:869624/100‑1 (MQ=255)
                                                                       tataAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACgg                            <  2:457110/100‑1 (MQ=255)
                                                                           aaTATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACCATTAACGGTTCa                        <  1:1808912/100‑1 (MQ=255)
                                                                           aaTATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCa                        <  1:1570186/100‑1 (MQ=255)
                                                                            atatTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCaa                       <  2:126277/100‑1 (MQ=255)
                                                                            atatTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCaa                       <  2:1405251/100‑1 (MQ=255)
                                                                              atTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAata                     <  1:944088/100‑1 (MQ=255)
                                                                              atTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAata                     >  2:1216249/1‑100 (MQ=255)
                                                                                tGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATc                   <  1:675354/100‑1 (MQ=255)
                                                                                 gAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCa                  <  2:1731914/100‑1 (MQ=255)
                                                                                  aaTATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCAc                 >  2:1036159/1‑100 (MQ=255)
                                                                                  aaTATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCAc                 <  2:1975341/100‑1 (MQ=255)
                                                                                      ttttGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCActctc             >  1:545827/1‑100 (MQ=255)
                                                                                      ttttGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCActctc             >  1:1652885/1‑100 (MQ=255)
                                                                                       nttGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCActctct            >  2:2430335/2‑100 (MQ=255)
                                                                                         tGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCttt          <  2:2159914/100‑1 (MQ=255)
                                                                                          gATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACAACAATTAACGGTTCAATATCACTCTCtttt         >  2:1849540/1‑100 (MQ=255)
                                                                                            ttAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCtttttt       <  2:2078257/100‑1 (MQ=255)
                                                                                             tAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtg      <  2:993316/100‑1 (MQ=255)
                                                                                             tAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtg      <  2:425364/100‑1 (MQ=255)
                                                                                                tCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtgatg   <  2:2098574/100‑1 (MQ=255)
                                                                                                tCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtgatg   <  2:1921217/100‑1 (MQ=255)
                                                                                                 ccccGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtgatga  >  2:546116/1‑100 (MQ=255)
                                                                                                 ccccGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTtgatga  >  1:190071/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
TAGAAATAATCAAAACACAGGTATTCCACTGGTTAATATATTCACATATGAAATGAATAAATATTGGAATATATAAATATTGAATATTTTGATTAATCCCCGTACTGATTATTCTTCATAATCAGTACGGGGTTGCTACAACATGTATTACTTTTTCACCACAATTAACGGTTCAATATCACTCTCTTTTTTGATGA  >  NC_000913/3136516‑3136712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.