BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4373266 =	332 (3.040)	8 (0.080)	8/184	11.5	2.5%	noncoding (70/99 nt)	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP328 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	4373296 =	306 (3.020)	8 (0.080)	8/184	11.5	2.5%	intergenic (+134/+69)	yjeI/yjeJ	DUF4156 family lipoprotein/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 333 total aligned reads displayed.

TCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGAT  >  NC_000913/4373168‑4373365

tCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGc                                                                                                    <  2:1881606/100‑1 (MQ=255)

  cAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGcc                                                                                                   >  2:52772/1‑99 (MQ=255)

  cAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCg                                                                                                  <  2:2047639/100‑1 (MQ=255)

    gagGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGa                                                                                                >  1:449516/1‑100 (MQ=255)

     agGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGAt                                                                                               <  2:60477/100‑1 (MQ=255)

        cTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGGCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTCGGCCGGATAAg                                                                                            <  2:2308350/100‑1 (MQ=255)

         tGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAgg                                                                                           >  2:1252121/1‑100 (MQ=255)

         tGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAg                                                                                            >  2:1824552/1‑99 (MQ=255)

          gggTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGc                                                                                          <  2:1909543/100‑1 (MQ=255)

          gggTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGc                                                                                          >  2:812486/1‑100 (MQ=255)

           ggTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCg                                                                                         <  1:491041/100‑1 (MQ=255)

            gTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGt                                                                                        <  2:755164/100‑1 (MQ=255)

            gTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGt                                                                                        >  2:347358/1‑100 (MQ=255)

             tGACAAACGTATAATTGCCGGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGtt                                                                                       <  2:887231/100‑1 (MQ=255)

                cAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAc                                                                                    >  1:1147912/1‑100 (MQ=255)

                  aaCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                                  >  1:965004/1‑100 (MQ=255)

                   aCGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTAcgcc                                                                                 <  1:1381250/100‑1 (MQ=255)

                      tataATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCa                                                                              >  2:2075423/1‑100 (MQ=255)

                         aaTTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                           >  2:1366100/1‑100 (MQ=255)

                         aaTTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                           >  1:2527616/1‑100 (MQ=255)

                          aTTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                                          >  1:1926592/1‑100 (MQ=255)

                           ttGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                                         <  1:857935/100‑1 (MQ=255)

                            tGCCTGAGGCGCGTCTCGTATCAGCCTGAGATTCGGCTGTGGAACTGGCTGATTGCGAGAGAATTTGTAGGCCGGATAAGTCGTTTACGCCGCATCCGGc                                                                        <  2:2515468/100‑1 (MQ=2)

                             gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                       >  1:887078/1‑100 (MQ=255)

                             gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                       >  1:2728033/1‑100 (MQ=255)

                             gCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                       >  1:2540427/1‑100 (MQ=255)

                               cTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATg                                                                     >  1:2684364/1‑100 (MQ=255)

                                 gATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAc                                                                   >  1:1932572/1‑100 (MQ=255)

                                 gATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAc                                                                   >  1:171173/1‑100 (MQ=255)

                                   tGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCa                                                                 >  2:2686023/1‑100 (MQ=255)

                                    gcgcTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCaa                                                                <  2:171170/100‑1 (MQ=255)

                                      gcttcgcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACg                                                              <  2:787084/100‑1 (MQ=255)

                                           gcttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCAc                                                         >  2:2747425/1‑100 (MQ=255)

                                            cttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACg                                                        >  1:2254122/1‑100 (MQ=255)

                                             ttATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGt                                                       <  1:2211885/100‑1 (MQ=255)

                                              tATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGtt                                                      >  1:604879/1‑100 (MQ=255)

                                               aTCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTa                                                     >  1:1342498/1‑100 (MQ=255)

                                                 cAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTTAGAATTTGTAGGCCGGATAAGGCGTCTACGCCGCATTCGGCATGACCAACGATCACGTTAt                                                    >  1:1648890/1‑99 (MQ=255)

                                                   ggCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAg                                                 <  1:289486/100‑1 (MQ=255)

                                                   ggCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAg                                                 >  2:5609/1‑100 (MQ=255)

                                                   ggCCTACATAAGGAATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAg                                                 >  1:1857685/1‑100 (MQ=255)

                                                     ccTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTc                                               >  2:2450948/1‑100 (MQ=255)

                                                       tACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCAt                                             >  2:2111142/1‑100 (MQ=255)

                                                        aCATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCAtt                                            >  2:2573773/1‑100 (MQ=255)

                                                         cATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCAttt                                           >  1:1592049/1‑100 (MQ=255)

                                                           tAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCa                                         <  1:2032511/100‑1 (MQ=255)

                                                           tAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCa                                         >  2:1676833/1‑100 (MQ=255)

                                                             aGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAgg                                       >  2:1185159/1‑100 (MQ=255)

                                                             aGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAgg                                       >  2:1951341/1‑100 (MQ=255)

                                                              ggCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGc                                      >  1:2617520/1‑100 (MQ=255)

                                                              ggCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGc                                      <  1:1477075/100‑1 (MQ=255)

                                                                 aTTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTgg                                   <  2:1147905/100‑1 (MQ=255)

                                                                 aTTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTgg                                   >  1:2186957/1‑100 (MQ=255)

                                                                  ttGCAACTGATTTAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGAATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGa                                  >  2:1320552/1‑100 (MQ=255)

                                                                   tGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGAt                                 <  1:34296/100‑1 (MQ=255)

                                                                    gCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATg                                <  1:1007240/100‑1 (MQ=255)

                                                                    gCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATg                                >  1:1398568/1‑100 (MQ=255)

                                                                    gCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGGTGACGCCGCATACGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTg                                    <  2:307172/96‑1 (MQ=255)

                                                                      aaCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc                              <  2:926517/100‑1 (MQ=255)

                                                                      aaCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGc                              <  1:1692847/100‑1 (MQ=255)

                                                                       aCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt                             >  2:2378722/1‑100 (MQ=255)

                                                                       aCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCt                             >  1:126560/1‑100 (MQ=255)

                                                                       aCTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTAATTTCAGGCTGGATGGCt                             >  2:65917/1‑100 (MQ=255)

                                                                        cTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTc                            <  2:1065388/100‑1 (MQ=255)

                                                                        cTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTc                            >  1:2057241/1‑100 (MQ=255)

                                                                        cTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTc                            >  2:1420269/1‑100 (MQ=255)

                                                                        cTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTc                            <  1:618382/100‑1 (MQ=255)

                                                                         tGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTcc                           <  2:418620/100‑1 (MQ=255)

                                                                         tGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTcc                           <  1:1054528/100‑1 (MQ=255)

                                                                         tGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTcc                           <  1:2299844/100‑1 (MQ=255)

                                                                          gATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCa                          <  1:1307871/100‑1 (MQ=255)

                                                                           aTTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAg                         >  2:33392/1‑100 (MQ=255)

                                                                             tGAATGCTTGAGAATTTGTAGGCCGCATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGcc                       <  1:2640021/100‑1 (MQ=255)

                                                                               aaTGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTc                     >  2:2204899/1‑100 (MQ=255)

                                                                                aTGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg                    <  2:879265/100‑1 (MQ=255)

                                                                                aTGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCg                    <  2:2540408/100‑1 (MQ=255)

                                                                                 tGCTTGAGAATTTGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGTCTCCACCCTCGc                   <  2:1654821/100‑1 (MQ=255)

                                                                                 tGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGc                   >  1:1728924/1‑100 (MQ=255)

                                                                                   cTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAt                 >  2:1115834/1‑100 (MQ=255)

                                                                                    ttGAGAATTTGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt                >  1:1974386/1‑100 (MQ=255)

                                                                                    ttGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt                >  2:1851670/1‑100 (MQ=255)

                                                                                    ttGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCAtt                >  2:2144793/1‑100 (MQ=255)

                                                                                     tGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGccagatcgga               >  1:2145282/1‑92 (MQ=255)

                                                                                     tGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTa               >  2:1462923/1‑100 (MQ=255)

                                                                                     tGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTa               <  2:2636111/100‑1 (MQ=255)

                                                                                      gagaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAg              >  1:1829881/1‑100 (MQ=255)

                                                                                      gagaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAg              >  1:2369791/1‑100 (MQ=255)

                                                                                       agaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGc             <  2:1513750/100‑1 (MQ=255)

                                                                                        gaATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCa            >  1:38906/1‑100 (MQ=255)

                                                                                        gaATTTGTAGGCCGGATAAGGCGTTTACGCCACATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCa            <  2:1992204/100‑1 (MQ=255)

                                                                                         naTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCaa           >  2:1016105/2‑100 (MQ=255)

                                                                                             tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGAt       >  1:1782942/1‑100 (MQ=255)

                                                                                              gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATg      <  2:2187513/100‑1 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag    <  1:552407/100‑1 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag    <  1:1426377/100‑1 (MQ=255)

                                                                                                aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgag    <  2:2273939/100‑1 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga   >  1:2413290/1‑100 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga   >  1:2557259/1‑100 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga   >  1:741652/1‑100 (MQ=255)

                                                                                                 ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATgaga   >  1:1165648/1‑100 (MQ=255)

TCCAGAGGCTGGGTGACAAACGTATAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATAAGGCATTGCAACTGATTGAATGCTTGAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGACCAACGATCACGTTATCAGTCATTTCAGGCTGGATGGCTCCAGCCTCGCATTAGCAAAGATGAGAT  >  NC_000913/4373168‑4373365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.