| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,856,887 | C→T | intergenic (‑81/‑206) | ygbA ← / → mutS | uncharacterized protein/methyl‑directed mismatch repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,856,887 | 0 | C | T | 98.9% | 309.0 / ‑4.2 | 90 | intergenic (‑81/‑206) | ygbA/mutS | uncharacterized protein/methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (51/38); total (52/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
ACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGT > NC_000913/2856792‑2856980 | aCGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAAc < 2:1585793/100‑1 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAAcc < 2:937557/100‑1 (MQ=255) cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAAcc < 1:2471765/100‑1 (MQ=255) gCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCg < 2:1959812/100‑1 (MQ=255) cTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGa > 1:2371266/1‑100 (MQ=255) cTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGa < 2:2134732/100‑1 (MQ=255) tGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATa < 2:820113/100‑1 (MQ=255) gCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATAc < 1:2681365/100‑1 (MQ=255) aTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTg < 1:2708706/100‑1 (MQ=255) aTGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTg > 2:2125494/1‑100 (MQ=255) tgctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGc > 1:1735812/1‑100 (MQ=255) gctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCg < 1:914017/100‑1 (MQ=255) gctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCg < 2:2223607/100‑1 (MQ=255) gctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCg < 2:2154876/100‑1 (MQ=255) ctgcCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGt < 2:2168624/100‑1 (MQ=255) nccTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTAc > 2:1016143/2‑100 (MQ=255) ccTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACt > 1:501278/1‑100 (MQ=255) ccACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGc > 2:2191584/1‑100 (MQ=255) ccACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGc < 2:1836092/100‑1 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt < 2:530722/100‑1 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt > 2:1672094/1‑100 (MQ=255) cACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt < 1:2372051/100‑1 (MQ=255) aCCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCtt > 2:2661190/1‑100 (MQ=255) ccTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTc < 2:841273/100‑1 (MQ=255) cTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCa > 1:2685263/1‑100 (MQ=255) cTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCa > 1:483566/1‑100 (MQ=255) cATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTTTGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATa < 2:2306464/100‑1 (MQ=255) aTTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATaa < 2:1847391/100‑1 (MQ=255) ttAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAGGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAg < 1:2364104/100‑1 (MQ=255) tAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATTCAATTTTGCGTACTTGCTTCATAAGc < 1:1680249/100‑1 (MQ=255) ccgatctATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCa < 1:63420/94‑1 (MQ=255) aaGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCa < 1:1096985/100‑1 (MQ=255) aaGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCa > 2:678959/1‑100 (MQ=255) aaGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCAAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTACTTCATAAGCa < 2:375417/100‑1 (MQ=255) gATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATc < 2:474547/100‑1 (MQ=255) gATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATc > 2:2339141/1‑100 (MQ=255) tGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCAc < 1:1350350/100‑1 (MQ=255) gTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACg > 2:1786281/1‑100 (MQ=255) tATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc > 2:1257085/1‑100 (MQ=255) tATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc > 1:1983713/1‑100 (MQ=255) aTTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTTAACTGATACAATTTTGCGTACTTGCTTCATAAGCATCAcact > 2:2382821/1‑97 (MQ=255) aTTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCaagatcgg > 2:63419/1‑93 (MQ=255) tttATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCaa > 1:2234665/1‑100 (MQ=255) atatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAg > 2:1913480/1‑100 (MQ=255) tatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGc > 1:2238957/1‑100 (MQ=255) atTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCt > 2:1523729/1‑100 (MQ=255) atTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCt > 1:728286/1‑100 (MQ=255) ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg > 1:707001/1‑100 (MQ=255) tACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGc > 1:340733/1‑100 (MQ=255) atcttaatcttaAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaa > 1:2026237/1‑100 (MQ=255) tcttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 1:1120298/1‑100 (MQ=255) tcttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 2:2252101/1‑100 (MQ=255) tcttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 1:1691028/1‑100 (MQ=255) cttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaaaa > 2:44662/1‑99 (MQ=255) cttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAAc > 1:950754/1‑100 (MQ=255) cttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAAc < 1:786320/100‑1 (MQ=255) aatcttaaAGGGCACTATGACTCCAAAGAAAAAAGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCAGCAAAACAGc > 2:1811814/1‑100 (MQ=255) ttaataaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCa > 1:441794/5‑100 (MQ=255) tcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCAt > 1:2603419/1‑100 (MQ=255) cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc > 2:454439/1‑100 (MQ=255) cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc > 2:258185/1‑100 (MQ=255) cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc > 2:2233918/1‑100 (MQ=255) ttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATAGAATTTTGCGTACTTGCTTCATGAGCATCACGCAAAAGCTGCAAAACAGCAt > 1:549641/1‑98 (MQ=255) naaaGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCtt > 2:325999/2‑100 (MQ=255) aaGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTc < 1:334697/100‑1 (MQ=255) aGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTcc < 1:44663/100‑1 (MQ=255) ggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg < 2:2685243/100‑1 (MQ=255) ggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg < 1:1000823/100‑1 (MQ=255) ggCACTATGAATCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg < 1:2318175/100‑1 (MQ=255) cgatcTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCg < 1:2040414/96‑1 (MQ=255) cACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGa > 2:232013/1‑100 (MQ=255) cACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGa > 2:256703/1‑100 (MQ=255) aCTATGACGGCAAAGCAGAAGGGTTACTCACCAGATACAGTTTTGCGAACTTTCTTCATAAGCATCACGCAAAATCTGCAAGACATCATCtttggcg > 2:675900/1‑93 (MQ=255) cTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAc > 1:1639370/1‑100 (MQ=255) tATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAcc < 2:340730/100‑1 (MQ=255) aTGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCgagatcg > 2:2040397/1‑94 (MQ=255) tGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAg > 1:1985659/1‑100 (MQ=255) gACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGTATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGc > 2:1934454/1‑100 (MQ=255) cTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCAt > 1:1375957/1‑100 (MQ=255) tCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATc < 2:2371247/100‑1 (MQ=255) aaaGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAg > 1:682966/1‑100 (MQ=255) aagaagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGa < 1:2006083/100‑1 (MQ=255) aagaagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGa > 2:1452592/1‑100 (MQ=255) agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTc < 2:2212252/100‑1 (MQ=255) agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATAACGCAAAAGCTGCAAACCAGCATCTTTCCCGGAACCAGCATCAAGAACt > 1:227042/1‑99 (MQ=255) gggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCg > 2:2001865/1‑100 (MQ=255) gggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCg > 1:1112811/1‑100 (MQ=255) gggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCg < 2:298108/100‑1 (MQ=255) ggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt < 1:933619/100‑1 (MQ=255) ggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt > 1:354601/1‑100 (MQ=255) | ACGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATTTATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGT > NC_000913/2856792‑2856980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |