| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,648,144 | (T)7→6 | 100% | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,138 | 0 | T | . | 97.7% | 353.9 / 1.5 | 86 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base . (41/43); total (42/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01 | |||||||||||
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233 | cAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGt > 1:2804999/1‑100 (MQ=255) gTATGGTATTAGCATTGATGCGTTAGATGATGGTTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGCCGGtt > 1:1925317/1‑99 (MQ=255) tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCAATCCAGTCAGAGCCACCAACTCATGGATGAAAAAAAAAAAACCGACGCAAAGTCGGtttt < 1:316683/100‑1 (MQ=25) aTGGCATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt < 2:2484520/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTGACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtatttt > 2:692759/1‑100 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:1832536/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:1194606/100‑1 (MQ=255) tGGTAGTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAACACCGACGCAAAGTCGGtttttt < 1:1100806/100‑1 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 1:2834614/100‑2 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 1:1166518/100‑2 (MQ=255) gTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttac < 2:1285757/100‑3 (MQ=255) tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttaca > 2:1249719/1‑97 (MQ=255) tATTAGCATTGATGCGTTAGATGATCGCTATCTCACTCCAGTCAGCGCCACCACCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttact < 1:2322466/100‑4 (MQ=21) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:2559994/100‑1 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTAGAAAATAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 1:1856269/1‑100 (MQ=21) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg > 2:1334608/1‑100 (MQ=255) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg > 2:23024/1‑100 (MQ=255) cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGa > 1:487862/1‑100 (MQ=255) aTTGATTCGTTAGATGATGGCTATCTCACTCCAGTCATAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAt < 1:1426527/100‑1 (MQ=18) ttGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAtt < 2:1327881/100‑1 (MQ=255) tGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTc > 2:2898310/1‑100 (MQ=255) aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 1:1537568/100‑1 (MQ=255) aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 2:1566398/100‑1 (MQ=255) gCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTAAC‑TCCGGGTTCg > 2:1000744/1‑97 (MQ=18) gCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGAc < 1:1360957/100‑1 (MQ=255) ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCAGAtctgaagagc > 2:2914623/1‑91 (MQ=17) tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 2:2764390/1‑100 (MQ=255) aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 2:1317454/100‑1 (MQ=255) gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt < 1:535407/100‑1 (MQ=255) atgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCtt > 2:1396746/1‑100 (MQ=255) tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTa > 1:2553383/1‑100 (MQ=255) tgatgGCTACCTAACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTa < 1:545047/100‑1 (MQ=18) ctcttccgaTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTa < 2:1996141/92‑1 (MQ=18) gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa < 2:2387124/100‑1 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:2466798/100‑1 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:1354899/100‑1 (MQ=255) gCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAATGCTTAata > 2:1890065/1‑98 (MQ=255) gCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATg < 2:2005907/100‑1 (MQ=255) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAACTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa > 1:571630/1‑100 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 2:625816/100‑1 (MQ=255) aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg > 2:1612639/1‑100 (MQ=255) ctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt < 1:2143970/100‑1 (MQ=255) ctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt < 1:202257/100‑1 (MQ=255) ctcACTCCAGTCACAGCCACCAACTCAGGGCGGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt > 2:1960382/1‑100 (MQ=21) tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 1:2839283/1‑100 (MQ=255) tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 2:2557098/1‑100 (MQ=255) aCTCCAGACAGAGCCACCAACTCAGGGCTGGAAAGTCAACAACGGAAGCAAAGACGG‑TTTTATACATGCGGACTCGGAGAAGACCTAATATgcccaggac > 1:2375102/1‑92 (MQ=9) cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 1:1162525/1‑100 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc < 1:1005014/100‑1 (MQ=255) cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGTCATGGCTTACTATGACGATgc > 2:1261499/1‑94 (MQ=18) gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg < 2:1388887/100‑1 (MQ=255) gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg < 2:356409/100‑1 (MQ=255) gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg < 2:253551/100‑1 (MQ=255) agCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGt < 2:261214/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCCGTAAAAGta > 2:332011/1‑100 (MQ=21) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta > 2:344426/1‑100 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1231314/100‑1 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:892899/100‑1 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata > 2:1186722/1‑100 (MQ=255) caACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATACGACGATGACCCAGTGAAAGTATATaa < 2:1772004/100‑1 (MQ=255) aCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt > 2:1139969/1‑100 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAATCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt > 1:1088791/1‑99 (MQ=255) tCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 2:1644738/100‑1 (MQ=255) tCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 2:344272/100‑1 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt < 2:2490029/100‑1 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACACCCGGATTCGGCCACCAATTAATATAACGATGACCCCGTGAAAGTCCATAAAta > 2:2433246/1‑97 (MQ=17) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTAGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAGGACCCAGTGAAAGTATATAAATCGt > 2:2771099/1‑100 (MQ=37) gggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa < 2:287983/100‑1 (MQ=255) cTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg > 1:105826/1‑100 (MQ=255) cTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg < 2:1269613/100‑1 (MQ=255) tGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGc < 2:2830248/100‑1 (MQ=255) aaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 2:463662/100‑1 (MQ=255) aaGTAAAAAACCGACGCAAAGTCGG‑TTCTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata > 2:2689103/1‑100 (MQ=255) tgTAAAAAACCGACTTTGCGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAGAGTATATAAATCGTCACTGCGata > 1:1277763/2‑99 (MQ=25) aGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatat < 1:2121647/100‑1 (MQ=255) gTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatata > 2:694748/1‑100 (MQ=255) gTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatata < 2:2865032/100‑1 (MQ=255) tAAAAAACCGACTTTGCGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACGCCGTGAAAGGATATAAATCGTCACTGCGatata > 1:841855/1‑99 (MQ=25) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATTCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata < 1:1786635/100‑1 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:1442371/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata < 1:1249714/100‑1 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACAGCCAGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACAGCGAtatata > 1:1917926/1‑100 (MQ=38) aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCATTGCGAtatata > 1:1932280/1‑99 (MQ=255) aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 2:833995/1‑100 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc < 2:2426988/100‑1 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc < 2:367134/100‑1 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 2:1770520/1‑99 (MQ=255) aaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGa < 2:2655157/100‑1 (MQ=255) cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCTAGTGAAAGTATATAAATCGTCACTGCGGTATATACCGAAGt > 2:260556/1‑100 (MQ=255) gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt > 1:13457/1‑99 (MQ=255) gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTg > 1:1042447/1‑100 (MQ=255) ncAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc > 1:2785388/2‑100 (MQ=255) cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:635160/94‑1 (MQ=255) aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 2:2839302/100‑1 (MQ=255) aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 2:27881/100‑1 (MQ=255) aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccct < 1:2565625/100‑1 (MQ=255) gTCGG‑TTTTTTACATCCGGATTCTGACAAGTCTTAATATGATGATGACCCAGTGAAAGTATATAAAGCGTCACTGCGATATATACCGAAGTGct < 1:1865440/94‑1 (MQ=255) gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc > 2:2515938/1‑100 (MQ=255) gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATAGTAACTGCGATATATACCGAAGTGctccc > 1:1028047/1‑97 (MQ=255) | CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |