| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,850,715 | Δ1 bp | 17.3% | intergenic (+22/‑145) | sppA → / → ansA | protease IV (signal peptide peptidase)/cytoplasmic L‑asparaginase 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,850,715 | 0 | A | . | 17.3% | 279.1 / 55.7 | 98 | intergenic (+22/‑145) | sppA/ansA | protease IV (signal peptide peptidase)/cytoplasmic L‑asparaginase 1 |
| Reads supporting (aligned to +/- strand): ref base A (49/32); new base . (6/11); total (55/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.58e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
AAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCC > NC_000913/1850617‑1850814 | aaagtgaCAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAg > 1:207937/1‑100 (MQ=255) aagtgcCAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTCCTGCCTTACCTGCGCCAACACGCGTTACGGCTTGTACTGAGCGGCCGACAg > 1:567996/1‑99 (MQ=255) gCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGcc < 2:1843417/100‑1 (MQ=255) cTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCca < 2:2086789/100‑1 (MQ=255) cTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCca < 2:1884123/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGTGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcac < 1:1097038/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCcac < 2:2775758/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCcac < 2:1516262/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGacac < 1:2230481/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcac < 2:2410111/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcac < 2:1222372/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcac < 1:217873/100‑1 (MQ=255) tGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCGTGTACTGAGTGGCCGACAGATC‑GTCGGCcac < 1:2722936/100‑1 (MQ=255) gCCGCGTTTAATGACCCCCAAGGCCGGTATGCGTTTTGCCTGAACTTCGCCAACATGCGTTAAGTCTTGTACTGGGTGGCCGAC‑GATCTGTCGGcc < 1:590881/96‑1 (MQ=255) gCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACat < 2:2255697/100‑1 (MQ=255) gCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACat > 2:2831857/1‑100 (MQ=255) gCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTGGCCTGACCTGAGCCAATATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGGcactc < 1:1616025/100‑3 (MQ=255) gCCGCGTTTAATGACCCACAAAACCGTTAGGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcactc < 1:329221/100‑3 (MQ=255) cgcgTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACatta > 2:1205863/1‑100 (MQ=255) cgcgTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGAC‑GATCTGTCGGCcactcag < 2:1182224/100‑5 (MQ=38) cgTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACattatt < 2:2415477/100‑1 (MQ=255) cgTTTAATGACCCACAAAACCGATATGCGTTTTGACTGACATGCGCCAACATGCGTTAAATCGTGTACTCAGTGGCCGACAGATC‑GTCGGGCACatta > 1:1370237/1‑98 (MQ=255) tttcacgccccACAAAACCGTTATGCGTTTCGCCTGACCTACGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACATATC‑GTCGGCCACATTAtttt < 1:1095405/92‑1 (MQ=255) tAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTAtttttt < 1:624428/100‑1 (MQ=255) aaTGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTa < 2:2916232/100‑1 (MQ=255) aaTGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTa < 2:2242628/100‑1 (MQ=255) acgACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTAc < 1:221301/98‑1 (MQ=255) aTGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAATGGCCGACAGATC‑GTCGGCCACATTATTTTTTAc > 1:1535774/1‑100 (MQ=255) cccACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcg > 1:2633635/1‑100 (MQ=255) cccACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcg > 1:2707572/1‑100 (MQ=255) cccACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcg > 1:1165154/1‑100 (MQ=255) cacaAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgac < 2:2152774/100‑1 (MQ=255) cacaAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgac < 2:2222780/100‑1 (MQ=255) cacaAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgac > 2:1323264/1‑100 (MQ=255) cacaAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgac > 2:2691182/1‑100 (MQ=255) cacaAAACCGTTATGCGTTGTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgac < 1:891143/100‑1 (MQ=255) acaAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTcgacg < 1:2569297/100‑1 (MQ=255) aaaaCCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGaa > 2:1903480/1‑100 (MQ=255) aaaCCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAAt < 1:1121233/100‑1 (MQ=255) ccGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCct > 2:380368/1‑100 (MQ=255) nttATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCctct > 1:1942224/2‑100 (MQ=255) gTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCctct < 1:1501066/100‑1 (MQ=255) gTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCctct < 2:207938/100‑1 (MQ=255) tATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTc < 1:2715888/100‑1 (MQ=255) tGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTccc > 2:2049218/1‑100 (MQ=255) cGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCCGCCACATTATTTTTTACGTCGACGAATCCTCTTccc < 1:1203380/98‑1 (MQ=255) gTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCt > 1:896097/1‑100 (MQ=255) tGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGttt > 1:261335/1‑100 (MQ=255) gCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTc > 2:199296/1‑100 (MQ=255) gCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTc > 1:134674/1‑100 (MQ=255) tGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGcc < 1:1579423/100‑1 (MQ=255) gACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGccc < 2:252175/100‑1 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCa > 2:2891732/1‑100 (MQ=255) ccTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCa > 2:1347774/1‑100 (MQ=255) cTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCa < 1:1324951/99‑1 (MQ=255) tGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCata > 2:1009772/1‑100 (MQ=255) gcgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCatat > 2:2324583/1‑100 (MQ=255) gcgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCatat > 2:1671906/1‑100 (MQ=255) gtcAACATGCGTTCAGTCTTGTACTGAGTGGCCGACAGATC‑GACGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATAttt > 2:1974170/3‑100 (MQ=255) gcCAACATGCGGTAAGTCTTGCACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCGTCTTCCCGCTGTTTCGCTCCATAtt > 1:2178048/1‑99 (MQ=255) ccAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTc < 2:1141155/100‑1 (MQ=255) ccAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTc > 1:573885/1‑100 (MQ=255) aaCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCt > 2:465096/1‑100 (MQ=255) aaCATGCGTGCAGTCTTGTACTGCGTGGTCGACAGATG‑GTCGGCCACATTATTTTTTACTTCGTCGAATCCTCTTCTAGCTGTTTCGCTCCGTATTTc > 1:1208592/1‑98 (MQ=255) cATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTa < 2:1872168/100‑1 (MQ=255) tGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCTGCCACATTATTTTTGACGTCGACGAATCCTCTTCCCGCTGGTTCGCCCCATATTTCCTTATc < 1:2712085/100‑1 (MQ=255) gCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATcc > 1:1504284/1‑100 (MQ=255) gTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGc > 2:603368/1‑100 (MQ=255) gTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGc > 2:575996/1‑100 (MQ=255) tAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCAt < 1:1395540/100‑1 (MQ=255) aaGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATa > 2:1302901/1‑100 (MQ=255) gTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGt > 1:2182717/1‑100 (MQ=255) gTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCGCTTCCCGCTGTTTCGCCCCATATTTCATTATCCGCATAGt > 1:699767/1‑100 (MQ=255) cTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCAATATTTCCTTATCCGCATAGTAt > 2:1616568/1‑100 (MQ=255) ttGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATc > 2:2693063/1‑100 (MQ=255) tGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATcn < 2:861106/100‑2 (MQ=255) tGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCa < 2:502534/100‑1 (MQ=255) tGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCa < 2:573888/100‑1 (MQ=255) gTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAg > 2:2388427/1‑100 (MQ=255) tACTGAGTGGCCGACAGCTC‑GTCGGCCACATTTTTTTTTACGTCTACGAATGCTCTTCCCGCTGCGTCCCTCCATATTTCCTTATCCGCATCGTATCAgg > 1:405312/1‑100 (MQ=255) aataatgTGGCCGAC‑GATCTGTTGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAgg > 1:2537014/7‑100 (MQ=255) ataatgTGGCCGAC‑GATCTGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAgg > 2:109860/6‑99 (MQ=38) aCTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGt < 1:2497549/100‑1 (MQ=255) aatgTGGCCGAC‑GATCTGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTgc > 2:1490694/4‑100 (MQ=39) gAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTgcg > 2:2325233/1‑100 (MQ=255) atgTGGCCGAC‑GATCTGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTgcg > 2:828166/3‑100 (MQ=255) aGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTgcgc < 2:2340237/100‑1 (MQ=255) gTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCt > 2:640594/1‑100 (MQ=255) gTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATACTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCt > 1:1184674/1‑100 (MQ=255) gTGGCCGAC‑GATCTGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCt > 2:37076/1‑100 (MQ=255) tGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTtcgc > 1:336207/1‑98 (MQ=255) tGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTc > 2:1762058/1‑100 (MQ=255) ggCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTcc > 2:2400071/1‑100 (MQ=255) ggCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTcc > 1:2852787/1‑100 (MQ=255) ccGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTcccc > 2:2137076/1‑100 (MQ=255) ccGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTcccc > 2:94282/1‑100 (MQ=255) cGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACTAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATGCGCATAGTATCAGGTGCGCTccccc > 1:523492/1‑100 (MQ=255) aGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTTCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGcc < 1:2049207/100‑1 (MQ=255) aGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGcc > 1:1996575/1‑100 (MQ=255) aGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGcc < 2:86999/100‑1 (MQ=255) | AAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATC‑GTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCC > NC_000913/1850617‑1850814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |