| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 91.0% | 278.2 / 19.9 | 89 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (1/7); new base T (39/42); total (40/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.91e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑g > 1:2213957/1‑100 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑g > 2:680437/1‑99 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt < 1:1873012/100‑1 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑ttt > 2:2876146/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGCTTCTCTCCTCTCGAAAGC‑G‑t‑tttt > 1:2171608/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt > 2:1268271/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt > 2:15348/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt > 2:2730477/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt‑tt < 1:1254896/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt‑tt < 1:1846808/100‑1 (MQ=255) aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt‑ttt > 2:151398/1‑99 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt‑tttctcc < 1:2370522/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTACTCTCGAAAGC‑G‑t‑tttt‑tttctcc > 1:2249933/1‑95 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCt > 1:55483/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTg > 2:533148/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tttt‑tttctc > 1:866060/1‑93 (MQ=255) atctccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTCGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTg < 2:2052782/96‑1 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGc < 2:333996/100‑1 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGca < 1:2814235/100‑1 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGcatc > 2:465956/1‑100 (MQ=255) ccGATTGTTACTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTgagat > 1:2052771/1‑96 (MQ=255) ccGATTGTTAATAGTTATATTCCGGTGACCTTTACGTTCGGTATGAATGGGACCCGTCTGGGATTTTCTCGTCTCGAAACC‑GTT‑TTTT‑TTCTCCTGcat > 1:1745271/1‑99 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGcatca > 2:2343548/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGcatcat > 2:2672872/1‑100 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCAttt < 2:865887/100‑1 (MQ=255) tggtattaGTTGTATTCCGGTGTGCTTTGCGGGCGGTCTGTGGGCGTCCCGTCTGGTATTCTTTCCTCTCGAAAGC‑G‑TGTTTT‑TTCTCCTGCATCAttga < 1:121180/97‑3 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTAt > 2:1709913/1‑100 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTAt > 1:2364768/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGc < 2:1688728/100‑1 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCa < 1:934557/100‑1 (MQ=255) attaGTTAGATCCCGGCTGCCTTTGCGTTCGGTCGGAATGCGTCCCGTCTGAGATTCTCTCCTCTCGAAAGC‑G‑T‑TTTTGTTCTCCTGCATAAATGATGc < 1:364610/99‑1 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑‑‑TTTT‑TTCTCCTGCATAAATGATGCAgga < 1:2031086/100‑2 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTTTCTTTCTTCATTTATGCAgg > 1:2216575/1‑100 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAgg < 1:2073132/100‑1 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGgc < 1:1268266/100‑1 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGGAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGgc > 1:1605220/1‑99 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATAAATGATGCAggag < 1:1216880/100‑3 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTTCTCTCGGAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGgcgc > 2:1708137/1‑100 (MQ=255) atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGa > 1:1217245/1‑100 (MQ=255) atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAg < 2:1129079/100‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGc < 2:2225189/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGcc > 2:61869/1‑100 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTGTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAg > 1:1611725/1‑100 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt < 1:2250131/100‑1 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt > 1:751533/1‑100 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt > 2:1889426/1‑100 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 1:463900/100‑1 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc < 2:473076/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:1707405/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:2479509/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTTTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:2179492/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:2119040/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:1925860/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:1207167/1‑100 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 2:711065/100‑1 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 1:1683084/100‑1 (MQ=255) cGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGAt < 2:751536/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg > 2:2783827/1‑100 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑TGTTTT‑TTCTCTTGCATAATTTATGCTGGCCCGAGCCAGTTCGTCATTACCGCGATg > 1:1146664/1‑100 (MQ=255) ggcTGAGTCCGACCCGTCTGGGATTCTCTCCTCTCGAAGGCTG‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGGGCCAGTTCGTCATTACCGCGATGc < 1:614074/98‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 1:2217260/1‑100 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 2:548768/1‑100 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 1:136219/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTTCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCACGATGc > 1:1333321/1‑97 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATTCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 2:2775210/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:1625926/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:1501663/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:534643/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:916540/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa > 1:87423/1‑100 (MQ=255) aTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAg < 1:2068158/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2462121/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:636455/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2778843/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:755794/100‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1611731/99‑1 (MQ=255) cccGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGa > 2:2682522/1‑100 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:477682/99‑1 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 1:2735733/1‑100 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 1:1027116/100‑1 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag < 1:465953/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 1:1007426/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt < 1:489391/100‑1 (MQ=255) gggATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt < 2:808723/100‑1 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg > 2:2538855/1‑100 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 2:2410005/100‑1 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCAGTTATGCAGGCGCGAGCCAGGTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg > 1:1584100/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt < 2:2866829/100‑1 (MQ=255) aTTCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:1873466/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 2:1018676/100‑1 (MQ=255) tctctcCTCTCGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa < 2:91136/100‑1 (MQ=255) ctcctcgcGAAAGC‑G‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:680434/100‑1 (MQ=255) cctctcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCTGCCGGGAGTAGTTTGTGGATtg > 1:650964/1‑98 (MQ=255) cctctcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 2:868969/1‑100 (MQ=255) ctctcGAAAGC‑GTT‑TTTT‑TTTTTCTTTATCATTTATGCAGGCGCGAGCCAGTTTGTCATTACCGCGATGCTGGCAGCCGGGAGTATTTTGTGGATtgctg > 1:205389/1‑100 (MQ=255) ctctcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:2912113/1‑100 (MQ=255) ctctcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 1:2699979/1‑100 (MQ=255) tcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:1780812/100‑1 (MQ=255) tcGAAAGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:210769/100‑1 (MQ=255) aaaGC‑GTT‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGa > 2:587220/1‑100 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TTTT‑TTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGA > NC_000913/2809668‑2809860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |