| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 90.3% | 351.2 / 31.5 | 113 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (3/8); new base C (51/49); total (55/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 | aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCTGAACAGCGCTTCGATATTCAG‑c < 1:54118/100‑1 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑c < 2:58652/100‑1 (MQ=255) gACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccc > 2:1287956/1‑99 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 1:2142861/1‑96 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgc > 2:2517279/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgcg < 1:1271792/100‑6 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccctgcg > 2:2450144/1‑95 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑cc‑ccc > 1:666315/1‑95 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGtt < 2:116067/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGGCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTg < 2:131099/100‑1 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGtttn < 1:2077187/100‑2 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTg < 2:2585313/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACAGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGc > 1:1926498/1‑100 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCa < 2:2682134/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCa < 1:1100458/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCa < 2:1633610/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAg < 1:763402/100‑1 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGa > 2:1587284/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGATCAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGcgcgaaa > 1:1582221/1‑94 (MQ=255) acaGAAAAGGCCAGCCTCGCGTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGAtt > 1:1780758/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGCTATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTc > 2:1371684/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGAttt > 1:990094/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTGTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGAttt < 1:1203169/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGCTTTcg > 1:1884045/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCGTGAGACTGGCCTTTCTGACAGATGCTGACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTcg < 2:2716112/100‑1 (MQ=255) aatgtccAGCCTCGCTTGAAACTTGCCTTTCTGTCAGATGCTTACTTACTCTCGGAACAGCTCTTCTATATTCAG‑CCTCC‑TGCGTTTGCAGGATTTcg < 1:2501631/93‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCgcgc < 2:1114716/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCgcgc < 1:1784930/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCgcgc < 1:1968508/100‑1 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCaa > 1:1133020/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCaa > 2:1782064/1‑100 (MQ=255) ggCCAGCCTCGCTTGAAACTGGCCTTTCTGACTGATGCTTACTTAATCGCGGAACTGCCCTTCGATATTCTG‑CC‑CCATGCGTTTGCAGGATTTCgcgc < 1:2794954/98‑1 (MQ=255) ccAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAAc < 2:58218/100‑1 (MQ=255) aGCCTCGCTTGAGAGTGGCCTTTCTGACAGATACTTACTTACTTGCGGAACAGCGCTTCGATATTCAGACC‑CC‑TGCATTTCGAGGATTTCGCGCAAACgg > 1:1863235/1‑100 (MQ=255) aGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACgg < 2:84992/100‑1 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGgc > 2:1533701/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGgc > 2:1053413/1‑100 (MQ=255) gCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGgc > 2:918750/1‑100 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGgcg < 2:1857938/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 1:1492551/100‑1 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 1:590012/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc > 1:747597/1‑100 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 2:2477501/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcat > 2:202807/1‑98 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 2:1638632/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 2:1638685/1‑100 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCCCAAACGGCGCAGGCCt > 1:2172669/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 2:2142874/100‑1 (MQ=255) aCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa > 2:2288626/1‑100 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 1:1623448/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:1790370/1‑100 (MQ=255) ggCCCTGCTGACAGATGCTCACTTCCTCGCCGAGCAGCGCGTCGATATTCAG‑CC‑CCGTGCGTTTGCAGGATTTCTCGCAAATGGCGCAGGCCGTTAACCt < 1:1437117/100‑1 (MQ=255) gCCGTTCTGACAGATGCTGACGTGCTGGGGTAACGGCGCTTCGATATTCAG‑CCGCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCaa < 1:2602666/96‑1 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 1:2629801/1‑100 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt < 2:220873/100‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc > 1:1394253/1‑100 (MQ=255) tCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCt > 1:2230657/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:2650945/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCAATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTgg > 2:1552530/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 1:732970/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:559339/1‑100 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:870335/100‑1 (MQ=255) tGCTTACTTACTCGCGGACAAGCGCTTCGATATTCAGACC‑TC‑TGCGTTTGCAGGATTTCGCGCAAGCGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 1:1320310/98‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:2462080/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CCATGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAAAACGt > 1:1082983/1‑100 (MQ=255) acttactCGCGGCACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCTCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt < 1:967260/97‑1 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:264279/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 1:1053410/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:318957/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCCGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:249533/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:2525542/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:271128/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:2311074/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:642322/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:220163/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:921584/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAG‑CCTCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:740045/1‑100 (MQ=255) gcgGAACAGCGCTTCGATATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:1601785/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgt < 1:642319/100‑2 (MQ=255) cgGAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:1447193/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAG‑CCGCC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:1322412/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:2522678/100‑1 (MQ=255) gAACAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc > 1:1980380/1‑100 (MQ=255) aaCAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCa > 2:80447/1‑100 (MQ=255) aCAGCGCTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa < 2:2311089/100‑1 (MQ=255) gcgcTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt < 1:918747/100‑1 (MQ=255) gcgcTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:85049/1‑100 (MQ=255) cgcTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 1:1997551/1‑100 (MQ=255) gcTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:1830950/100‑1 (MQ=255) gcTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 2:451088/1‑100 (MQ=255) gcTTCGATATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:453429/100‑1 (MQ=255) cTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:1943838/100‑1 (MQ=255) cTTCGATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1453665/100‑1 (MQ=255) gATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:1251611/1‑100 (MQ=255) gATATTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:204805/1‑100 (MQ=255) atatTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCATCCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt < 1:161083/100‑1 (MQ=255) tatTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAGGGGTGAGGCCAATTTCACGACCt < 1:355604/99‑1 (MQ=255) tatTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 1:2442965/98‑1 (MQ=255) tatTCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 2:2883557/100‑1 (MQ=255) ttCAGCCC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:1538903/1‑100 (MQ=255) | ATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CC‑CC‑TGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866490‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |