| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,951,559:1 | +A | 100% | pseudogene (18/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,559 | 1 | . | A | 86.7% | 332.7 / 46.3 | 113 | pseudogene (18/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base . (5/10); new base A (49/49); total (54/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
AACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGC > NC_000913/3951460‑3951657 | aaCAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑c > 2:2218963/1‑100 (MQ=255)aaCAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑c < 1:2096921/100‑1 (MQ=255)aaCAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑c > 2:2456137/1‑100 (MQ=255) aCAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑ca > 2:568491/1‑99 (MQ=255) aGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑cagcg < 2:44251/100‑5 (MQ=255) aGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCGGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑cagcg > 2:131635/1‑96 (MQ=255) gCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑g‑cagcgc < 2:49174/100‑6 (MQ=255) gCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGACGATAAATCAATGACTGGCAGCAACACT‑g‑cagcgc > 1:1281028/1‑95 (MQ=255) tCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGc > 2:1730986/1‑100 (MQ=255) ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGTTGCGtg < 1:451149/100‑1 (MQ=255) ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGtg < 2:1817212/100‑1 (MQ=255) ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGtg > 2:1124995/1‑100 (MQ=255) ggCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGtg > 2:2394052/1‑100 (MQ=255) cacaTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGtgat < 2:665813/100‑1 (MQ=255) acttgttGCATTACAATGTGATTTAAATGCTCTGTTACCAGCAGTACAACAGCCTTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGtgat < 1:422258/96‑1 (MQ=255) caTGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGAAACACT‑G‑CAGCGCAGCTGCGtgatga < 1:970198/100‑1 (MQ=255) gtgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACa > 1:1712939/1‑100 (MQ=255) gtgGCATTACAAGGTCATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACa < 2:2876367/100‑1 (MQ=255) tgGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCATCTGCGTGATGAACAt > 2:2870053/1‑100 (MQ=255) ggCATTACAAGGAGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACAtt > 2:1912962/1‑100 (MQ=255) cATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTcc > 1:121036/1‑100 (MQ=255) cATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTcc < 1:133918/100‑1 (MQ=255) aTTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCt > 2:1464792/1‑100 (MQ=255) tACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCCATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTAATGAACATTCCTgg > 1:1293230/1‑100 (MQ=255) tACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTgg < 2:1202652/100‑1 (MQ=255) aCAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGc > 2:906222/1‑100 (MQ=255) cgaGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCg < 1:1602830/98‑1 (MQ=255) cAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCg > 2:498466/1‑100 (MQ=255) aaGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGtt > 2:1738439/1‑100 (MQ=255) aaGGTGATTTAAATGCTCTGTTACCAGCACCACAGCAGCCGTTAAATCAATGACTGGCAGCAACACC‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGt < 1:1756450/100‑1 (MQ=255) ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTa < 1:2864690/100‑1 (MQ=255) ggTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTa < 1:607713/100‑1 (MQ=255) gTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTAc < 1:1227089/100‑1 (MQ=255) aTTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAc < 1:782892/100‑1 (MQ=255) tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCTCCGCTGCATGATGAACATTCCTGGCGTTACGAcc > 1:2753928/1‑100 (MQ=255) tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAcc > 1:1503115/1‑100 (MQ=255) tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGAcc > 1:2577062/1‑100 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCAt > 1:1728280/1‑100 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGAAGCCGTTAAATCAATCACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCAt < 2:2775083/100‑1 (MQ=255) aTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCTGCTGCGTGATGAACATTCCTGGCGTTACGACCATccc < 1:1556300/100‑1 (MQ=255) gCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCgg < 2:2448306/100‑1 (MQ=255) gCTCTGTTACCACCATTACAGCAGCCGTTCAATCAATCCCTCGCACCACCACT‑C‑CAGCCCAGCAGCGTCACGAACCTTCCTGGCGTCACGACCGTCCCg > 1:66875/1‑99 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGt > 2:1232813/1‑100 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAc > 1:678311/1‑100 (MQ=255) gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGCCCATCCCGGTGACGc > 2:2231818/1‑100 (MQ=255) gTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGc < 2:426516/100‑1 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTAt > 2:2203692/1‑100 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATc < 2:1446745/100‑1 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATc > 2:1099545/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCt > 2:2428478/1‑100 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCt > 1:1483625/1‑100 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCt > 2:1449282/1‑100 (MQ=255) ccatacacaagcCGTAATATCACTCACTGGCAGCAACACC‑GCC‑GCGCATATGCGTGATGAACATTCCACGCGTAACGCCCATCCCGCTGACGCTATc < 1:1308044/88‑1 (MQ=255) aTTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg < 2:566024/100‑1 (MQ=255) ttACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgc > 1:2542800/1‑100 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgcg < 2:2592638/100‑1 (MQ=255) cagcagCCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGcc > 2:77090/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgt < 1:1029789/100‑1 (MQ=255) agcCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttg < 2:1863621/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgt < 1:1349405/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgt < 1:1349350/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACT‑C‑CAGCGCAGCTGCGTGATGAACATCCCTGGCGTTACGACCATCCCGGTGCCGCTATCTACGCGCCgttg > 1:2562345/1‑99 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgtt > 2:491419/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGG‑A‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgtt < 2:1094469/98‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgt < 2:815789/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgt < 2:2003859/100‑1 (MQ=255) ttAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttgtt < 1:1730978/100‑1 (MQ=255) tAAATCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa > 2:2544607/1‑100 (MQ=255) aaaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa < 2:2629428/100‑1 (MQ=255) aaaTCAATGACTAGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa > 2:841132/1‑99 (MQ=255) aaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a > 2:1521799/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a < 2:29262/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a < 2:206297/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaa‑a > 2:1276516/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa < 1:424260/98‑1 (MQ=255) cAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aaca > 1:602327/1‑100 (MQ=255) cAATGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aac < 1:1739581/99‑1 (MQ=255) aaTGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCGCGGTGACGCTATCTGCGCGCCGTTGTTGTTAA‑aacaa > 1:1963253/1‑100 (MQ=255) aTGACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑aacaac < 1:691761/100‑1 (MQ=255) gACTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacgg < 1:988805/100‑3 (MQ=255) gACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGt < 1:2231804/100‑1 (MQ=255) aCTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTg < 1:2655793/99‑1 (MQ=255) aCTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTc > 1:2219056/1‑100 (MQ=255) cTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcg < 2:1404191/100‑5 (MQ=255) cTGGCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTT‑TTaacaacaacggcg < 1:1512116/100‑5 (MQ=255) ggCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTTT‑aacaacaacggc < 1:896793/100‑7 (MQ=255) ggCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCgg > 1:2524719/1‑100 (MQ=255) ggCAGCAACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCgg > 2:2356298/1‑100 (MQ=255) gcagcaACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGa > 1:1601644/1‑100 (MQ=255) cagcaACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGAt < 2:1642286/100‑1 (MQ=255) agcaACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATc > 2:173193/1‑100 (MQ=255) gcagcaCT‑G‑CAGCGCAGATACGCGATGCACCCTCCTAAGGTTACGACAATCCCGGTGACGCTATCTACGCGACGTTGTTGTTAA‑AACAACTGTGGGATCg < 1:966797/100‑1 (MQ=255) caACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt > 1:2802037/1‑100 (MQ=255) caACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt < 2:1269992/100‑1 (MQ=255) caACACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGt < 2:891249/100‑1 (MQ=255) aaCACT‑G‑CAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCg > 2:2617478/1‑98 (MQ=255) aaCACT‑G‑CAGCGCAGCTGCGTGATCAACATTCCTGGCTTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACACCTGTCGGATCGTa < 1:1799145/100‑1 (MQ=255) acacT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTaaa < 2:2540573/100‑1 (MQ=255) acT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAAcc < 1:1664745/100‑1 (MQ=255) g‑c‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGc > 1:1564373/1‑100 (MQ=255) | AACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACT‑G‑C‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAA‑AACAACTGTCGGATCGTAAACCTGC > NC_000913/3951460‑3951657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |