| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 380,022:1 | (G)10→11 | 100% | intergenic (‑141/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,022 | 1 | . | G | 66.1% | 265.1 / 153.7 | 115 | intergenic (‑141/+47) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (21/18); new base G (41/35); total (62/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
ATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGG > NC_000913/379930‑380121 | tatatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATc < 1:869700‑M1/14‑1 (MQ=255) atatgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCg < 1:2806196‑M1/15‑1 (MQ=255) tgtcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCa < 2:2638627‑M1/18‑1 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGG‑GG‑GGG‑CTAATCGGCAgg > 1:378747/1‑100 (MQ=255) tcaatgtatacccccctatagtatataacactggagaataaaatttatcctgtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAgg < 1:1178899‑M1/20‑1 (MQ=255) tcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAgg < 2:823478‑M1/20‑1 (MQ=255) tcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAgg > 1:383240‑M1/81‑100 (MQ=255) tcaatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAgg < 1:896253‑M1/20‑1 (MQ=255) caatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAggg < 2:233518‑M1/21‑1 (MQ=255) aatgcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAggg > 1:688188‑M1/79‑99 (MQ=255) tacccccctatagtatatAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGG‑GG‑GGG‑CTAATCGGCAGGGAAGgc > 1:491867‑M2/19‑100 (MQ=255) gcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAgg > 2:1044802‑M1/76‑100 (MQ=255) gcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAgg > 1:362378‑M1/76‑100 (MQ=255) gcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAgg > 1:1772344‑M1/76‑100 (MQ=255) gcatacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAg > 2:189282‑M1/76‑99 (MQ=255) catacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgc < 1:761483‑M1/26‑1 (MQ=255) cccccctatagtatatAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGG‑GG‑GGG‑CTAATCGGCAGGGAAGgccgc > 2:815697‑M2/17‑100 (MQ=255) atacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgcc < 2:2705015‑M1/27‑1 (MQ=255) atacccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgcc < 1:23939‑M1/27‑1 (MQ=255) ccccctatagtatatAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGG‑GG‑GGG‑CTAATCGGCAGGGAAGgccgcc < 2:736491‑M2/85‑1 (MQ=255) cctccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgccgc < 1:2270539‑M1/29‑1 (MQ=255) cccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgccgcc < 2:2912165‑M1/30‑1 (MQ=255) cccccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGgccgcc < 1:2360067‑M1/30‑1 (MQ=255) cccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGcccc > 2:959602‑M1/69‑100 (MQ=255) cccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGcccc < 1:232894‑M1/32‑1 (MQ=255) ccctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCgg > 1:1650494‑M1/68‑100 (MQ=255) cctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCgg > 1:1692733‑M1/67‑100 (MQ=255) cctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCgg > 2:1699823‑M1/67‑100 (MQ=255) ataGTATACAACACTGGAGAATAAAAATTATCCGGAGAATGTGGTCGGGAAACAAAGCGGAAA‑‑GGG‑GG‑GGG‑CTAATCGGCAGCGAAGGCCGCCCCGGa < 1:2532070/98‑1 (MQ=255) ctatagtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagagtaaaGG‑GG‑GGG‑CTAATCGGCAGGGCAGGCCGCCCCGGAt < 1:1682940‑M1/35‑1 (MQ=255) tatatAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGc < 2:491870‑M2/95‑1 (MQ=255) agtatataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc < 2:150359‑M1/39‑1 (MQ=255) agtatataacactggagaataaaatttatccggtgaaggtggtcggaaaacaaagagtaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGTCGCCCCGGatacc > 2:1974108‑M1/62‑98 (MQ=255) taACACTGGAGAATAAAACTTATCCGGTCAATGTGGTCGGGAAACAAAGAGCAAA‑‑AGG‑AG‑GGG‑CTAATCGGCAGGGAAGGACGCCCCGGATAgcgggcgg > 1:713155/1‑100 (MQ=255) tAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGc > 2:22704‑M2/2‑100 (MQ=255) atataacactggagaataaaatttatccggtgaatgtggtcgggaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:1870579‑M1/59‑100 (MQ=255) atataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggc < 1:5665‑M1/42‑1 (MQ=255) ataacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg > 1:2496882‑M1/57‑100 (MQ=255) acacTCGAATATACAATTTATCCGGTGAACGTCGTCGGAAAACAAAGCGGAAA‑‑GGC‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg < 1:2585605/94‑1 (MQ=255) taacactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg < 1:2132467‑M1/45‑1 (MQ=255) acactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 2:896256‑M1/54‑100 (MQ=255) acactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 1:20457‑M1/54‑100 (MQ=255) cactggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg > 2:2503071‑M1/53‑100 (MQ=255) ctggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 2:2426853‑M1/50‑1 (MQ=255) ctggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 2:2747572‑M1/50‑1 (MQ=255) ctggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:2188856‑M1/50‑1 (MQ=255) ctggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa < 1:2242529‑M1/50‑1 (MQ=255) tggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg > 2:1015633‑M1/50‑100 (MQ=255) ggagaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg < 1:2247153‑M1/52‑1 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAt > 1:2128755‑M1/46‑100 (MQ=255) gaataaaatttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATc < 2:1547152‑M1/55‑1 (MQ=255) aaaatttatccggtgaatatggtcggaagacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa < 1:820533‑M1/59‑1 (MQ=255) tttatccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAttt < 2:728414‑M1/63‑1 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCa > 1:1566759‑M1/35‑100 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCa > 2:1855479‑M1/35‑100 (MQ=255) atccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 2:842438‑M1/35‑100 (MQ=255) tccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 2:761486‑M1/34‑100 (MQ=255) ccggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg < 1:1909093‑M1/68‑1 (MQ=255) cggtgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc > 1:1469653‑M1/32‑100 (MQ=255) gtgagtgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGCAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCcan > 1:2621036‑M1/30‑95 (MQ=255) tgaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAg > 2:949126‑M1/29‑100 (MQ=255) gaatgtggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa < 1:1946788‑M1/73‑1 (MQ=255) atgttgtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACg > 1:2598095‑M1/26‑100 (MQ=255) tgtggtcggaaaacaaagaggaaaGGTGG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACgg < 2:1241345‑M1/76‑1 (MQ=255) tggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 1:1116873‑M1/23‑100 (MQ=255) tggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGc > 1:2260135‑M1/23‑100 (MQ=255) ggtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:913429‑M1/22‑100 (MQ=255) gtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:2191467‑M1/21‑100 (MQ=255) gtcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg < 2:2889658‑M1/80‑1 (MQ=255) tcggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc < 2:2847237‑M1/81‑1 (MQ=255) cggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:333380‑M1/19‑99 (MQ=255) cggaaaacaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa < 1:2281554‑M1/82‑1 (MQ=255) aaaacaaagaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt < 2:116585‑M1/85‑1 (MQ=255) aCAAAGAGGAA‑‑GGGG‑GG‑GGG‑CTGATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGTAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:132117/1‑100 (MQ=255) acaaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc < 2:308255‑M1/88‑1 (MQ=255) caaagaggaaaGGTGG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:1241340‑M1/12‑100 (MQ=255) caaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 1:129728‑M1/89‑1 (MQ=255) caaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:2762057‑M1/12‑100 (MQ=255) caaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 1:1680434‑M1/12‑100 (MQ=255) aaagaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg < 2:1317617‑M1/90‑1 (MQ=255) agaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAc > 2:820716‑M1/9‑100 (MQ=255) gaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTgcagccc > 2:2242678‑M1/8‑97 (MQ=255) gaggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 2:2286403‑M1/8‑100 (MQ=255) gaggaaaGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCg > 2:931655‑M1/8‑100 (MQ=255) ggaaaggg‑gg‑ggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt > 1:636911/6‑100 (MQ=255) ggaGGGGG‑GG‑GGG‑GTAAGCGGAAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAGGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt < 1:1336893/98‑1 (MQ=255) aggaaaGG‑GG‑GGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCg > 2:2806214‑M1/7‑100 (MQ=255) ggaaaGGCGG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATGTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt > 1:1565009‑M1/6‑100 (MQ=255) ggaaaGG‑GGCGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGCCAGAAGGAATCAGACTTTCCAGGTCAGACGGGCTGCAAGTTGCAGAc < 1:710279‑M1/92‑1 (MQ=255) gaaaggg‑gg‑ggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtc < 2:499395/96‑2 (MQ=255) gaaagGG‑GG‑GGG‑CTAAGCGGCAGGGAAGGCAGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTgcagccc > 1:1142691‑M1/6‑94 (MQ=255) aggg‑gg‑ggg‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGTCTGCAACTTGCAGCCCGtctga < 2:2725065/99‑5 (MQ=38) G‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGAAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc < 2:1109000‑M1/100‑1 (MQ=255) GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatca < 2:1169109‑M1/100‑1 (MQ=255) GGG‑CTAATCGGCAGGGAAGGCCGCCCTGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcatc < 2:2738834‑M1/100‑1 (MQ=255) GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGCTAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGAAAGTTGCAGACCGTTAACatcatc < 1:676771‑M1/100‑1 (MQ=255) GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcatc > 2:1989288‑M1/1‑100 (MQ=255) GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcatc > 1:1021489‑M1/1‑100 (MQ=255) GG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCg < 1:587479‑M1/100‑1 (MQ=255) G‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCgg < 2:101600‑M1/100‑1 (MQ=255) | ATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGG‑GG‑GGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGG > NC_000913/379930‑380121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |