New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1083403	85 (0.820)	16 (0.170)	13/162	NT	16.7%	coding (28/1272 nt)	efeB	deferrrochelatase, periplasmic
	?	NC_000913	= 1083411	82 (0.870)					coding (36/1272 nt)	efeB	deferrrochelatase, periplasmic

ATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1083297‑1083403 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgaCGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATC  <  NC_000913/1083411‑1083313                                                                                                                                                                                                                ATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAAC                                                                                                            >  2:2221328/1‑100 ATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAAC                                                                                                            <  2:2717902/100‑1   GCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTTGATTAAGCGTTATGCAGTATAAAGATGAAAACGG                                                                                                          <  2:294501/100‑1   GCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGG                                                                                                          >  2:1528405/1‑100    nACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGC                                                                                                         >  2:1372129/2‑100    CACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGC                                                                                                         >  2:329002/1‑100    CACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGC                                                                                                         >  1:2288375/1‑100      CTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGT                                                                                                       <  2:96799/100‑1      CTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGT                                                                                                       >  1:616607/1‑100      CTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCG                                                                                                        >  1:1539430/1‑99       gcgtAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTG                                                                                                      <  2:599226/96‑1       TGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTG                                                                                                      <  1:300705/100‑1       TGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTG                                                                                                      <  2:1436080/100‑1        GAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGA                                                                                                     >  1:2232389/1‑100        GAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGA                                                                                                     >  2:764486/1‑100              ACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTC                                                                                               >  2:35872/1‑100                 GATTTCTGCGCTGGCGGAAGATCGGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTC                                                                                               <  1:2882478/97‑1                        GCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCG                                                                                     <  2:2795163/100‑1                        GCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCG                                                                                     <  2:1890890/100‑1                         CGCTGGCGGAAGATCTGGCGCAACTGCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGAGGAAAACGGCGTGACGGTTCATTCACGCCG                                                                                     <  1:498296/99‑1                          tCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTT                                                                                   <  2:2302879/99‑1                          GCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGT                                                                                    <  1:2202640/99‑1                           CTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTa                                                                                  >  1:2302864/1‑99                           CTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTT                                                                                  <  2:1089984/100‑1                            TGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTTT                                                                                 <  2:2030883/100‑1                             GGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGTGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTTT                                                                                 <  1:2403508/99‑1                               CGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTTTCAT                                                                              <  1:878799/100‑1                                  AAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTTTCATCTT                                                                           <  1:35871/100‑1                                                CTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACG                                                             <  2:60884/100‑1                                                                                         AAAGATGAAAACGGCGTGAATGAACCGTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCT                    >  1:2713120/1‑100                                                                                            GATGAAAACGGCGTGAATGAACCGTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCC                 >  1:1776031/1‑100                                                                                                  gtaGGCGTAACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACACTTAATCCAGTCCCAGCACACAGCGAAGTTGCGCCAGATCTTCCGCCAGC           >  1:1417378/4‑100                                                                                                    CGGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGC         <  2:2565683/100‑1                                                                                                    CGGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACCCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGC         <  1:2232761/100‑1                                                                                                     GGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCA        >  1:398191/1‑100                                                                                                     GGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCA        >  2:1131130/1‑100                                                                                                     GGCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATATTCCGCCAGCGCA        >  2:967310/1‑100                                                                                                      GCGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAG       <  2:2270934/100‑1                                                                                                       CGTGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAG       >  1:1332219/1‑99                                                                                                         TGACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAA    >  1:1588473/1‑100                                                                                                           ACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATn  <  1:2840257/100‑2                                                                                                           ACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATC  <  2:2245421/100‑1                                                                                                           ACGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATC  <  2:1053768/100‑1                                                                                                                                                                                                                ATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAAGCGTTATGCAGTATAAAGATGAAAACGGCGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1083297‑1083403 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgaCGGTTCATTCACGCCGTTTTCATCTTTATACTGCATAACGCTTAATCCAGTCCCAGCACACCGCGAAGTTGCGCCAGATCTTCCGCCAGCGCAGTAATC  <  NC_000913/1083411‑1083313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.