| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1165696 = | NA (NA) | 17 (0.190) | 8/156 | NT | NA | intergenic (+11/‑389) | ycfP/ndh | putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase |
| ? | NC_000913 | 1165728 = | NA (NA) | intergenic (+43/‑357) | ycfP/ndh | putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase | |||||
GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCTGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1165805‑1165696‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacctgatgcgCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCA > NC_000913/1165728‑1165826 GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTT > 1:1224645/1‑100GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTT > 2:925727/1‑100GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTT > 2:2456232/1‑100GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTT > 2:1620051/1‑100 ATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTA < 1:2193649/100‑1 AAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCATGGTTACC < 2:1533419/100‑1 AAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACC > 1:2590349/1‑100 AGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCT < 2:909047/100‑1 AGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCT < 2:2333325/100‑1 AGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCTGAT > 2:284612/1‑100 GCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCTGATGCG > 2:229541/1‑100 TTCGGAGCGCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTTTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATGAATGC > 2:1143124/1‑100 GGAGCGCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTG > 1:1654974/1‑100 AGCGCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGAT > 1:276026/1‑100 CGCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGt > 1:1247358/1‑99 CGCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGC > 1:2641364/1‑100 aCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATACGGCGTCCCCGCCGCATACGACAGTCGAGCATCAATGCCAGAT > 1:1991503/2‑97 GCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCG > 2:805769/1‑100 GCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCG > 2:1368883/1‑100 GCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCG > 1:1626848/1‑100 GCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCG > 2:1929564/1‑100 GCATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCG > 2:2424715/1‑100 CATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGC > 2:1346206/1‑100 CATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGC > 2:2691961/1‑100 CATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATCCGC > 1:1756154/1‑100 ATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCT > 2:1183556/1‑100 ATCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCT > 1:2092433/1‑100 TCAGGTACCGGCAAGGTTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTT > 1:1582576/1‑100 ACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAA < 2:2016432/100‑1 CCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAAC < 1:2787995/100‑1 TGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGC > 2:1352950/1‑100 TGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGC > 2:457096/1‑100 ATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCC < 2:737479/100‑1 CGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGC > 2:2137350/1‑100 CGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGC > 1:1577169/1‑100 GCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATGCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCA > 1:1589286/1‑100 GATAAGAAGCGCATCAGGCATTGATGCTCGACTGTCGGATGCGGCGTGGACGCCTTATCCGACCCACAGAATTCGGAGCGCATCAGGTACCGGCAAGGTTACCTGATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1165805‑1165696‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacctgatgcgCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATGCGCTTCTTATCAGGCCTACCGAACGCCCTGCA > NC_000913/1165728‑1165826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |