| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1269275 | NA (NA) | 23 (0.240) | 8/162 | NT | 22.3% | coding (1/108 nt) | ldrA | toxic polypeptide, small |
| ? | NC_000913 | = 1269313 | 88 (0.850) | intergenic (‑38/+390) | ldrA/ldrB | toxic polypeptide, small/toxic polypeptide, small | |||||
AATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACG > NC_000913/1269207‑1269374 | aataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG < 1:2592783‑M2/100‑1 (MQ=255)aataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTG < 1:2139686‑M2/100‑1 (MQ=255) ataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGC > 1:1062257‑M2/1‑100 (MQ=255) ataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGC > 1:411899‑M2/1‑100 (MQ=255) ataatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGC > 1:1851012‑M2/1‑100 (MQ=255) taatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCG > 2:985563‑M2/1‑100 (MQ=255) aatTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGG < 2:1159462‑M2/100‑1 (MQ=255) atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGC > 2:2159528‑M2/1‑100 (MQ=255) atTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGC < 2:1343517‑M2/100‑1 (MQ=255) tCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTA < 1:529705‑M2/100‑1 (MQ=255) cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT < 2:199424‑M2/100‑1 (MQ=255) cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT < 2:376839‑M2/100‑1 (MQ=255) cccGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTAT < 1:226409‑M2/100‑1 (MQ=255) tCGGTGCTGCCAGGTCGTGCCAGACAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCATTGTTGTAATGACCACACTTTGCGGCTATTCTTGAATTg < 1:242434/100‑1 (MQ=11) tCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTg < 2:523791/100‑1 (MQ=32) cGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGt < 2:823568/100‑1 (MQ=32) ggTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGtt > 2:2521067/1‑100 (MQ=35) tgctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCt < 1:2085652/100‑1 (MQ=35) ctgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTgg < 2:1511321/100‑1 (MQ=40) tgcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGt < 2:2530220/100‑1 (MQ=40) gcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGtt > 1:1714532/1‑100 (MQ=40) gcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGtt > 2:2261624/1‑100 (MQ=40) gcCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGtt > 2:2438325/1‑100 (MQ=40) cAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCa > 1:1495088/1‑100 (MQ=255) cAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCa < 2:2495205/100‑1 (MQ=255) cAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCAGATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCa > 1:1593692/1‑100 (MQ=255) ggTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAg > 1:721264/1‑100 (MQ=255) gTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGa < 2:1686984/100‑1 (MQ=255) gTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTa < 2:1460009/100‑1 (MQ=255) gTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTa < 1:762837/100‑1 (MQ=255) tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAg < 1:2208817/100‑1 (MQ=255) tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAg > 2:1265392/1‑100 (MQ=255) tGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAg < 2:698391/100‑1 (MQ=255) gCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGc > 1:1177157/1‑100 (MQ=255) cAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccc > 2:2157089/1‑100 (MQ=255) cAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccc > 2:2157386/1‑100 (MQ=255) cAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGc > 2:134380/1‑98 (MQ=255) aGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGcccc < 1:134109/100‑1 (MQ=255) gAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGccccc > 1:1327790/1‑100 (MQ=255) aaTCAGGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGtt < 1:894882/100‑1 (MQ=255) aTCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTc < 1:1216728/100‑1 (MQ=255) cATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtg < 2:2552906/100‑1 (MQ=255) cATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtg > 2:7355/1‑100 (MQ=255) cATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtg < 1:2087440/100‑1 (MQ=255) aTGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgt < 2:2549737/100‑1 (MQ=255) ggCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCtgttg > 1:276631/1‑100 (MQ=255) cAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTc > 2:898560/1‑100 (MQ=255) cAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTc > 1:6468/1‑100 (MQ=255) cAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTCGCGGCTGTCCTTGAGTTGTTCTAGCTCAAGATCAGCCCCCGTTCTGGTGTc > 1:2391147/1‑100 (MQ=14) aaaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCa < 2:605562/100‑1 (MQ=255) aaaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCa < 2:324732/100‑1 (MQ=255) aaCTGCGCGATCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGTATTGGTCTTGGTCAAGATTAGCCCCCGTTCTGTTGTCAg < 1:1182394/100‑1 (MQ=14) aaCTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAg < 2:1626432/100‑1 (MQ=255) cTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGt < 1:1586968/100‑1 (MQ=255) gcgcGAGTGTCATATAGCCGCCTTGTTGTAATGACCACATTTTGCGGCTCTTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTg > 1:749645/1‑100 (MQ=255) gcgcGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTg < 2:1937440/100‑1 (MQ=255) cgcgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGt > 2:1306778/1‑100 (MQ=255) gcgAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTa < 2:114933/100‑1 (MQ=255) aGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatc < 2:1040845‑M2/100‑55 (MQ=255) cGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcct < 2:2570878‑M2/100‑57 (MQ=255) cGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgagcagtttgccatgactttctggcacgacctggcggcaccgatcct < 1:624698‑M2/100‑57 (MQ=255) cGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACctct > 1:2459028/1‑100 (MQ=255) gTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctg < 1:1102561‑M2/100‑58 (MQ=255) gTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctg < 1:2556051‑M2/100‑58 (MQ=255) gTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttatggcacgacctggcagcaccgctcctg < 1:112161‑M2/100‑58 (MQ=255) gTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcctg < 2:898456‑M2/100‑58 (MQ=255) gTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCtctc < 2:1266425/100‑1 (MQ=255) tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctgg < 2:841684‑M2/100‑59 (MQ=255) tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctgg < 1:185517‑M2/100‑59 (MQ=255) tCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCa > 1:1976619/1‑100 (MQ=255) cATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggc < 2:2183388‑M2/100‑60 (MQ=255) cATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggc < 1:2212771‑M2/100‑60 (MQ=255) cATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgcgcgcgcagtttgccatgactttctggcacgacctggcggcaccggtccttgc < 2:763698‑M2/100‑60 (MQ=255) cATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACATCTCaa > 1:2298215/1‑100 (MQ=255) atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagccccgatcctggcg < 1:497888‑M2/100‑61 (MQ=255) atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcg < 2:2148197‑M2/100‑61 (MQ=255) atatAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcg < 2:2431277‑M2/100‑61 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccctgactttctggcacgacctggcggcaccgatcctggcgg < 2:933455‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg < 1:2736181‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgattttctggcacgacctggcagcaccgatcctggcgg < 1:460939‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcctggcgg < 2:1039463‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcctggcgg < 2:1292326‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATatgacgctcgcgcagtttgccatgactttctggcacgacctggcggcaccgatcctggcgg < 2:1543344‑M2/100‑62 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg > 1:68571/1‑100 (MQ=255) tataGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACg > 1:93116/1‑100 (MQ=255) | AATAATTCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCCTTGTTGTAATGACAACATTTTGCGGCTATTCTTGAATTGTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTGTACCTCTCAACG > NC_000913/1269207‑1269374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |