| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2796243 = | 109 (1.050) | 21 (0.230) | 10/160 | NT | 18.4% | coding (570/663 nt) | csiR | transcriptional repressor of csiD |
| ? | NC_000913 | 2796271 = | 89 (0.950) | coding (598/663 nt) | csiR | transcriptional repressor of csiD | |||||
Only 100 of 147 total aligned reads displayed.
GGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTA > NC_000913/2796144‑2796339 | ccggggaaagtgttgtgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactca > 2:1381074‑M1/100‑100 (MQ=255) ggggcaagtgttgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACt < 1:2439275‑M1/3‑1 (MQ=255) gggcaagtgttgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTg > 2:1323368‑M1/97‑100 (MQ=255) ggcgCGTTATCGATTTATCTGGATGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACt > 1:1690754/1‑99 (MQ=255) ggcaagtgttgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTgg > 2:2126819‑M1/96‑100 (MQ=255) gcgcGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTgg < 2:2370699/100‑1 (MQ=255) gcgcGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTgg < 1:1504386/100‑1 (MQ=255) gcaagtgttgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGgc < 2:1097303‑M1/6‑1 (MQ=255) cgcgTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGgc > 1:1353453/1‑100 (MQ=255) gcgTTATCGATTTATCTGGCTGCGGCGAACGGTGCGTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGgcg < 1:2034777/100‑1 (MQ=255) agtgttgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGcgcg < 1:2364435‑M1/9‑1 (MQ=255) tCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGAt > 1:1829968/1‑100 (MQ=255) tgcgtattccggaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcactgacacgc < 1:2340127‑M1/10‑7 (MQ=255) gATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATAc > 1:703579/1‑100 (MQ=255) ttATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACcgc < 1:1093012/100‑1 (MQ=255) tATCTGGCTGCGGCGAACGGTGCTTTCGGTAGAGATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCA‑‑‑‑AGATACcgc > 1:1915172/1‑99 (MQ=255) gaagagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGcc > 1:2111902‑M1/76‑100 (MQ=255) gCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGcc > 1:542193/1‑100 (MQ=255) cagcggcaAACGATGCTTTCGGTGAAAATGCGGGAGGATAAACACGATCAGCACCAGACCCTGATGGCGGCGGTACTGGCGCG‑‑‑‑AGATACctcgc > 1:967444/3‑94 (MQ=255) gcggcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAg < 1:2169023/99‑1 (MQ=255) gagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGt > 2:2178577‑M1/73‑100 (MQ=255) gagtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGt > 2:2114602‑M1/73‑100 (MQ=255) agtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTg > 2:235041‑M1/72‑100 (MQ=255) agtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTg > 1:2249382‑M1/72‑100 (MQ=255) agtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTg > 2:2497443‑M1/72‑100 (MQ=255) agtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTg > 1:1018226‑M1/72‑100 (MQ=255) gtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTg > 1:685265‑M1/71‑99 (MQ=255) gtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGa > 2:750521‑M1/71‑100 (MQ=255) gtagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGa > 1:2531669‑M1/71‑100 (MQ=255) ggcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGa > 1:283460/1‑100 (MQ=255) ggcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATAAGCACCAGACACTGACTGCGGCGCAACTGGCGCG‑‑‑‑AGATACcgcgc > 1:1845293/1‑90 (MQ=255) tagttaattgccagccatcgcctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCGCGCGAGATACCGCGCGCGCCAg > 2:912543‑M1/70‑100 (MQ=255) gcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAg > 2:202285/1‑100 (MQ=255) gcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAg < 2:1034390/100‑1 (MQ=255) gcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAg > 2:79492/1‑100 (MQ=255) gttaattgccagccatcgcctgcgggataatgggaattggcgtcagtgaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCgagtgagt > 1:633776‑M1/68‑99 (MQ=255) gAACGGTGCGTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAg < 1:1327093/98‑1 (MQ=255) aCGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTaa > 2:967400/1‑100 (MQ=255) aCGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACGGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGtt < 1:1444407/98‑1 (MQ=255) cGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAAt > 2:1870450/1‑100 (MQ=255) cGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGAACAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAAt > 2:542202/1‑100 (MQ=255) ggTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTCCTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATg > 1:1320210/1‑100 (MQ=255) ggTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATg > 2:2224253/1‑100 (MQ=255) gTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAgatcggaa > 1:1377034/1‑93 (MQ=255) gTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATgc > 2:522806/1‑100 (MQ=255) tGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATgcg > 1:856530/1‑100 (MQ=255) gatctggTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGcc < 2:517265/95‑1 (MQ=255) cTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGcc < 2:2317762/100‑1 (MQ=255) agccatcggctgctggataatgggaattggcgtcagtaaatgctggcgcattaactcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAg > 1:954754‑M1/58‑100 (MQ=255) gctGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAgaga > 2:1971247/3‑97 (MQ=255) tcgcctgctggataatgggaattggcgtcagtaaatgcgggcgcattacctcACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCAttt > 1:548876‑M1/53‑100 (MQ=255) tGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCAttt < 2:2063504/100‑1 (MQ=255) gAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTAc < 2:2232320/100‑1 (MQ=255) gAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTAc < 1:869848/100‑1 (MQ=255) aaaTGCTGGAGGATAAACACGATCAGCACCAGACCCTGCCTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGAGCGACAGTGAGTTACTGCGACAGCATTTACt < 2:543585/100‑1 (MQ=255) aaaTGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACt < 2:1870338/100‑1 (MQ=255) aaaTGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACt < 2:2566616/100‑1 (MQ=255) tGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGAc < 1:2561196/100‑1 (MQ=255) gCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGAc > 1:2314649/1‑99 (MQ=255) cTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGc > 2:315625/1‑100 (MQ=255) tGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGcc < 1:2063466/100‑1 (MQ=255) ggaggaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCa > 1:925456/1‑100 (MQ=255) aggcaaaaCACGATCAGCACCAGACCCTGACTGTGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCGGTGAGATAATGCGCCAGCATTTACTGACGCCaa > 1:29644/6‑99 (MQ=255) aggaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAAt < 2:1488909/100‑1 (MQ=255) ggaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAAtt < 1:260621/100‑1 (MQ=255) gaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTc < 2:711122/100‑1 (MQ=255) tAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTccc > 2:1685560/1‑100 (MQ=255) aaaCACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AAATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCa > 1:2434311/1‑100 (MQ=255) aaCACGATCAGCACCAGACCCTGACTGCGGCGGTACTTGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAt > 1:1552077/1‑100 (MQ=255) aaCACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAt > 2:2182575/1‑100 (MQ=255) acacGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAtt > 2:1155702/1‑100 (MQ=255) acacGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAtt > 2:2492261/1‑100 (MQ=255) cGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATc > 1:410429/1‑100 (MQ=255) gATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATcc > 2:41859/1‑100 (MQ=255) gATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATcc < 2:875843/100‑1 (MQ=255) gATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATcc > 2:286206/1‑100 (MQ=255) gATCAGCACCAGAACCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCTCGCGCAAGAGAGATAATGCGCCAGCATTTACTGACGCCATTTGCCATTATcc > 2:2906505/1‑100 (MQ=255) tCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCcag > 1:2789551/1‑100 (MQ=255) gCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCcagcag < 2:1433633/100‑1 (MQ=255) gCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCcagcag < 2:2362491/100‑1 (MQ=255) ccAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCg < 1:623685/100‑1 (MQ=255) aGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAt < 2:2522534/100‑1 (MQ=255) cccTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggc > 2:84152/1‑100 (MQ=255) cccTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggc > 2:709952/1‑100 (MQ=255) cTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctg > 2:2786276/1‑100 (MQ=255) cTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctg > 1:800412/1‑100 (MQ=255) cTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctg < 2:176794/100‑1 (MQ=255) cTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctg > 1:1400135/1‑100 (MQ=255) cTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctg < 2:181622/100‑1 (MQ=255) gACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctggc < 2:421941/100‑1 (MQ=255) gACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctggc < 2:2789569/100‑1 (MQ=255) gACTGCCGCGGTACTGGGGCG‑‑‑‑TGATGCCGCGCGCGCCAGTGAGTAAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg < 1:1563611/99‑1 (MQ=255) aCTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCa < 1:1133054/100‑1 (MQ=255) gcggcgGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAAtt < 2:768951/100‑1 (MQ=255) cggcggTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCa > 1:1945819/1‑96 (MQ=255) cggcggTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTa > 2:1066406/1‑100 (MQ=255) cggcggTACTGGCGCG‑‑‑‑AGATACCGCGAACGCCAGTGAGGTAATGCGCCAGCATTTACTGACACCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTa > 1:164979/1‑100 (MQ=255) gcggTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAac < 1:1853229/100‑1 (MQ=255) gcggTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAac < 2:800415/100‑1 (MQ=255) ggTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAacta > 1:1479367/1‑100 (MQ=255) | GGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCG‑‑‑‑AGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTA > NC_000913/2796144‑2796339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |