New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4621831 =108 (1.040)4 (0.040) 4/162 NT 4.1% coding (63/1332 nt) yjjJ putative protein kinase
?NC_000913 4621874 = 91 (0.960)coding (106/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 131 total aligned reads displayed.

AATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGC  >  NC_000913/4621732‑4621928
                                                                                                   |                                                                                                 
gtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttct                                                                                                   <  2:903877‑M1/1‑1 (MQ=255)
 tccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttctc                                                                                                  >  1:744145‑M1/99‑100 (MQ=255)
 aTCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTc                                                                                                  <  2:126767/100‑1 (MQ=255)
  ccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttctct                                                                                                 <  1:2114193‑M1/3‑1 (MQ=255)
   cacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTg                                                                                                <  2:2301069‑M1/4‑1 (MQ=255)
   cacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTg                                                                                                <  2:2263266‑M1/4‑1 (MQ=255)
   cacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTg                                                                                                <  2:311285‑M1/4‑1 (MQ=255)
   cacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTg                                                                                                <  2:356830‑M1/4‑1 (MQ=255)
   cTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTg                                                                                                <  2:877634/100‑1 (MQ=255)
    acccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTgg                                                                                               <  2:87194‑M1/5‑1 (MQ=255)
     aTTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGc                                                                                              <  2:418199/100‑1 (MQ=255)
     aTTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGc                                                                                              >  1:884855/1‑100 (MQ=255)
     aTTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGc                                                                                              <  2:2711828/100‑1 (MQ=255)
     aTTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGc                                                                                              <  1:758703/100‑1 (MQ=255)
       tCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCaa                                                                                            >  1:2366389/1‑100 (MQ=255)
       tCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCaa                                                                                            >  2:1731038/1‑100 (MQ=255)
       cgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTGGCaa                                                                                            <  2:1741354‑M1/8‑1 (MQ=255)
       cgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTGGCaa                                                                                            <  1:1235719‑M1/8‑1 (MQ=255)
        cAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAt                                                                                           >  1:2286913/1‑100 (MQ=255)
         aaGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGAGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtc                                                                                          >  1:799588/1‑100 (MQ=255)
          aGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCACGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtca                                                                                         >  2:1127448/1‑100 (MQ=255)
              tCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtcagtca                                                                                     >  2:1595648/1‑100 (MQ=255)
              tCTATTCACGAATCTATTCATTAATACGCGAGCTGACTGATCTGCTACTGCAAGGGCCGCGTACTGCCCCGGTTTTGCGCCAGCGCCTGGCAAtcagtcg                                                                                     <  1:2178903/100‑2 (MQ=255)
               cTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtcagtcag                                                                                    <  2:488526/100‑1 (MQ=255)
                tATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAgg                                                                                   >  2:1083271/1‑100 (MQ=255)
                tATTCACGAATCTATTCATTAAGGAGCGAGCTGACTGATTTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAgg                                                                                   <  1:1007394/100‑1 (MQ=255)
                 aTTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGc                                                                                  >  2:465488/1‑100 (MQ=255)
                  ttCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCg                                                                                 >  2:1060688/1‑100 (MQ=255)
                  ttCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCg                                                                                 >  2:1787329/1‑100 (MQ=255)
                   tCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGa                                                                                >  1:1954198/1‑100 (MQ=255)
                    cACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGc                                                                                  >  1:2704311/1‑97 (MQ=255)
                    cACGAATCTATGCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGCAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGAc                                                                               >  1:1527057/1‑100 (MQ=255)
                        aaTCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTtc                                                                           <  2:2227022/100‑1 (MQ=255)
                         aTCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTtct                                                                          >  1:311284/1‑100 (MQ=255)
                           cTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCa                                                                        <  2:1360048/100‑1 (MQ=255)
                           cTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCa                                                                        <  2:2131815/100‑1 (MQ=255)
                            tATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCAc                                                                       <  2:2498105/100‑1 (MQ=255)
                             aTTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACg                                                                      <  2:763494/100‑1 (MQ=255)
                                cATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCt                                                                   >  2:1630367/1‑100 (MQ=255)
                                 aTTAATGAGCGAGCTGAGTGGTCTTTTACTGCAAGAGCCGCGTTCTGGCCCTGAATGGCGCCAGCGGCTGTCAGTCAGTCGGGCGACGTTCTCACGCCtt                                                                  >  1:2432300/1‑100 (MQ=255)
                                  ttAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCttg                                                                 <  2:2489045/100‑1 (MQ=255)
                                    aaTGAGCGAGCTGGCTGATCTTTTTCTGCAAGGGGCGCGTTCTGCCACGGAATTGCGCCAGCGTCTTGCAGTCAGTCAGGCGACGTTCTCACGACttgt                                                                <  1:1394838/99‑1 (MQ=255)
                                    aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCttgtt                                                               >  2:2163741/1‑100 (MQ=255)
                                     aTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCttgttg                                                              <  1:2847556/100‑1 (MQ=255)
                                       gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGcc                                                            <  1:2640750/100‑1 (MQ=255)
                                       gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGcc                                                            <  2:2006202/100‑1 (MQ=255)
                                         gacgcagcagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCag                                                          >  1:806109‑M1/59‑100 (MQ=255)
                                           gagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCagag                                                        >  1:3173/1‑100 (MQ=255)
                                           cgcagcagtgcatatcgcgttgctcgtgctttaccaaagcgaatcacccgatcttcTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTcccacag                                                        <  1:1315639‑M1/44‑4 (MQ=255)
                                            agcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAgaga                                                       <  1:2353803/100‑1 (MQ=255)
                                             gcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTTGCAATCAGTCTGGCGACGTTCTCACGCCATGTTGCCAGagaa                                                      <  2:1970315/100‑1 (MQ=255)
                                                gactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGAt                                                   >  1:650077/1‑100 (MQ=255)
                                                cagtgcatatcgcgttgcccgtgctttaccaaagcgaatcacccgatcttcTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGAt                                                   >  1:882928‑M1/52‑100 (MQ=255)
                                                 actgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATc                                                  <  1:1059051/100‑1 (MQ=255)
                                                  ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCg                                                 >  1:2210209/1‑100 (MQ=255)
                                                  ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCg                                                 >  2:1679019/1‑100 (MQ=255)
                                                  ctgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCg                                                 >  2:1430414/1‑100 (MQ=255)
                                                    naTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCggg                                               >  1:2216126/2‑100 (MQ=255)
                                                    gaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCggg                                               >  2:610226/1‑100 (MQ=255)
                                                    gaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCggg                                               >  1:2387684/1‑100 (MQ=255)
                                                     aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCggg                                               >  2:1887708/1‑99 (MQ=255)
                                                     aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                              <  1:619802/100‑1 (MQ=255)
                                                     aTCTATTACTGCAAGGGCCGCCTTCTGGCCCGGACTTCCTCCAGCGTCGGGCAAATATTCTGGCGGCGTGCTCACGCCTTGTTGTCAGagaagagggggg                                              >  1:2729029/1‑94 (MQ=255)
                                                      tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCCATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                             >  1:552267/1‑100 (MQ=255)
                                                      tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCggg                                               >  1:2095419/1‑98 (MQ=255)
                                                      tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                             <  2:2704328/100‑1 (MQ=255)
                                                       cTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                             >  1:1534359/1‑99 (MQ=255)
                                                       cTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGa                                            >  1:299405/1‑100 (MQ=255)
                                                        ttttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGAt                                           >  1:242922/1‑100 (MQ=255)
                                                         tttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGAtt                                          >  1:377863/1‑100 (MQ=255)
                                                         tttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGAtt                                          >  2:2823698/1‑100 (MQ=255)
                                                          ttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTc                                         <  1:1377508/100‑1 (MQ=255)
                                                           tACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCTCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGAtt                                          <  1:2276951/98‑1 (MQ=255)
                                                           tACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCg                                        >  1:229430/1‑100 (MQ=255)
                                                             cTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCt                                      >  2:2537320/1‑100 (MQ=255)
                                                              tGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCtt                                     >  2:2613981/1‑100 (MQ=255)
                                                              tGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCtt                                     <  1:787140/100‑1 (MQ=255)
                                                              tGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCtt                                     >  2:2438346/1‑100 (MQ=255)
                                                               gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                    >  1:2831101/1‑100 (MQ=255)
                                                               gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGAGATTCGCttt                                    >  1:1908639/1‑100 (MQ=255)
                                                               gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATAAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                    <  1:1021186/100‑1 (MQ=255)
                                                                cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                   <  2:2273385/100‑1 (MQ=255)
                                                                cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                   <  1:1389885/100‑1 (MQ=255)
                                                                  aGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGt                                 <  2:2204140/100‑1 (MQ=255)
                                                                     gCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTaaa                              >  1:1039874/1‑100 (MQ=255)
                                                                     gCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTaaa                              >  1:1256540/1‑100 (MQ=255)
                                                                               gCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCaa                    >  1:2799371/1‑100 (MQ=255)
                                                                                ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAc                   >  2:786502/1‑100 (MQ=255)
                                                                                ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAc                   >  1:526854/1‑100 (MQ=255)
                                                                                  ccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAcgc                 >  2:2706155/1‑100 (MQ=255)
                                                                                  ccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAcgc                 <  2:135445/100‑1 (MQ=255)
                                                                                     gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat              <  2:2768061/100‑1 (MQ=255)
                                                                                       aTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGatat            <  2:452298/100‑1 (MQ=255)
                                                                                           cgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAc        >  1:2827044/1‑100 (MQ=255)
                                                                                            gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct       >  2:369043/1‑100 (MQ=255)
                                                                                            gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct       <  2:2640781/100‑1 (MQ=255)
                                                                                             ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg      >  1:2597452/1‑100 (MQ=255)
                                                                                                gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGACATGTActgctg   <  1:1522072/100‑1 (MQ=255)
                                                                                                 cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACtgctgc  >  2:2871563/1‑100 (MQ=255)
                                                                                                 cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACtgctgc  >  1:87193/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
AATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGC  >  NC_000913/4621732‑4621928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.