BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	737205 =	70 (0.670)	13 (0.130)	5/176	NT	15.8%	pseudogene (381/1137 nt)	ybfL	pseudogene, DDE domain transposase family;putative factor; Not classified; putative receptor protein
*	?	NC_000913	1532171 =	NA (NA)	13 (0.130)	5/176	NT	15.8%	coding (356/1137 nt)	ydcC	H repeat‑associated putative transposase

Only 100 of 114 total aligned reads displayed.

TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATG  >  NC_000913/1532073‑1532266

tCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAag                                                                                                <  1:2741749/100‑1 (MQ=35)

tCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAag                                                                                                <  2:1796497/100‑1 (MQ=38)

tCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAag                                                                                                <  2:590998/100‑1 (MQ=38)

 cACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAaga                                                                                               >  2:1912260/1‑100 (MQ=38)

 cACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAaga                                                                                               <  1:445361/100‑1 (MQ=38)

  aagAGTGCTTTATTAAATGGATGCGTGACTGCAATTCTTCAGATGATAAAGACGTCATAAAAAAAAAAAAAAAAACGCTCCGGC‑ATTCTTATGATAagag                                                                                              <  1:1844647/98‑1 (MQ=14)

  aCGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAagag                                                                                              <  1:2667772/100‑1 (MQ=38)

  aCGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAagag                                                                                              <  2:854816/100‑1 (MQ=38)

  aCGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAagag                                                                                              <  2:2890159/100‑1 (MQ=38)

    gAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGt                                                                                             <  1:1831471/99‑1 (MQ=38)

        gCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTcgccg                                                                                        <  1:1738024/100‑1 (MQ=38)

        gCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTcgccg                                                                                        >  2:880278/1‑100 (MQ=38)

          tttATTCACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTcgccgcn                                                                                      <  2:2621007/100‑2 (MQ=255)

            tattaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAgg                                                                                    >  1:2445152/1‑100 (MQ=38)

            tattaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAgg                                                                                    <  2:2342706/100‑1 (MQ=38)

            tattaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAgg                                                                                    >  1:1300116/1‑100 (MQ=38)

            tattaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAg                                                                                     >  1:481448/1‑99 (MQ=38)

             attaACTGGATGCGTGATTGCCATTCATCAAATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCGACTCTTGTCATAAGAGtgccggagcg                                                                                    <  2:542737/100‑10 (MQ=14)

             attaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCGACTCTTGTCATAAGAGtgccggagcg                                                                                    <  1:857022/100‑10 (MQ=11)

             attaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCGACTCTTGTCATAAGAGtgccggagcg                                                                                    <  2:1002334/100‑10 (MQ=11)

             attaACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAggg                                                                                   <  1:2199678/100‑1 (MQ=38)

                aaCTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAg                                                                                <  2:198966/100‑1 (MQ=38)

                aaCTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAg                                                                                >  2:1230222/1‑100 (MQ=38)

                aaCTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAg                                                                                >  1:1509084/1‑100 (MQ=38)

                aaCTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAg                                                                                >  2:2091907/1‑100 (MQ=38)

                   tGGATGCGTGACTGCCATTCTTTAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGa                                                                             <  2:1108024/100‑1 (MQ=255)

                   tGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGa                                                                             >  2:1686608/1‑100 (MQ=38)

                    ggATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGAt                                                                            >  1:2019731/1‑100 (MQ=38)

                       tGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCa                                                                         <  2:131807/100‑1 (MQ=38)

                       tGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCa                                                                         <  2:2304220/100‑1 (MQ=38)

                         cGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATg                                                                       >  1:451198/1‑100 (MQ=38)

                         cGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATg                                                                       >  2:907670/1‑100 (MQ=38)

                          gTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGt                                                                      <  1:104884/100‑1 (MQ=38)

                           tGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTc                                                                     >  1:1709027/1‑100 (MQ=38)

                           tGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTc                                                                     <  1:1230217/100‑1 (MQ=38)

                           tGACTGCCATTCTACAGATCACAAAGACATCATCGCAATTGATTCCAAAACGCTCCGGC‑ATTCTTATTACAAGAGTCTCCGCAGGTGAGCGATTCATTTc                                                                     <  1:2481819/100‑1 (MQ=9)

                              cTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCAtt                                                                  <  2:1480214/100‑1 (MQ=38)

                              cTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCAtt                                                                  >  2:1190047/1‑100 (MQ=38)

                                gCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAg                                                                >  1:938103/1‑100 (MQ=35)

                                 ccATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGt                                                               >  2:625653/1‑100 (MQ=38)

                                 ccATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGt                                                               >  2:755535/1‑100 (MQ=38)

                                 ccATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGt                                                               >  2:755522/1‑100 (MQ=38)

                                  cATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTg                                                              <  2:611293/100‑1 (MQ=38)

                                  cATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTg                                                              >  2:2515777/1‑100 (MQ=38)

                                  cATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCGCCGGC‑AGTCTGATGATAAGAGGCTCCGCGGGGGGGCGATTCATGTCATTa                                                                 >  2:2323084/1‑97 (MQ=11)

                                   aTTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGc                                                             >  2:5857/1‑100 (MQ=38)

                                    ttcttcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCg                                                            <  2:2035221/100‑1 (MQ=38)

                                    ttcttcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCg                                                            <  2:1885223/100‑1 (MQ=38)

                                    ttcttcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCg                                                            <  2:822029/100‑1 (MQ=38)

                                    ttctacAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCGTGTCATTAGTGCg                                                            <  1:2757002/100‑1 (MQ=255)

                                      cttcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGtt                                                          >  2:1078448/1‑100 (MQ=38)

                                      cttcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGtt                                                          >  1:670877/1‑100 (MQ=38)

                                        tcAGCTGATAAAGACGTCATTGCAATTGATGGAAAAACGATCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTtct                                                        >  1:1317384/1‑100 (MQ=255)

                                        tcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTtct                                                        <  1:2212336/100‑1 (MQ=38)

                                        tcAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTtct                                                        <  2:1538104/100‑1 (MQ=38)

                                         cAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTtctc                                                       >  2:552660/1‑100 (MQ=38)

                                         cAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTtctc                                                       <  1:1282404/100‑1 (MQ=38)

                                          aGATGATAAAGACGTCATTGCAATTGATGGAAATACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTca                                                      <  1:2905473/100‑1 (MQ=38)

                                           gatgatAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTcaa                                                     >  1:2819794/1‑100 (MQ=38)

                                            atgatAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTcaac                                                    <  1:743070/100‑1 (MQ=38)

                                            atgatAAAGACGTCATTGCAATGGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTcaat                                                    <  1:1761938/100‑2 (MQ=25)

                                            atgatAAAGACGTCAGTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTcaac                                                    <  1:787872/100‑1 (MQ=38)

                                             tgatAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTcaaca                                                   >  1:2308212/1‑100 (MQ=38)

                                                   aGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGAAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGcac                                             >  1:1792475/1‑100 (MQ=25)

                                                        tCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCt                                        >  2:2060642/1‑100 (MQ=38)

                                                         cATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTg                                       >  1:820871/1‑100 (MQ=38)

                                                          aTTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTgg                                      <  1:2197185/100‑1 (MQ=35)

                                                          aTTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTgg                                      <  1:2060631/100‑1 (MQ=38)

                                                             gCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCa                                   >  2:2193033/1‑100 (MQ=38)

                                                               aaTTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATc                                 <  2:760052/100‑1 (MQ=38)

                                                               aaTTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATc                                 <  2:2873103/100‑1 (MQ=38)

                                                               aaTTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATc                                 >  2:1276041/1‑100 (MQ=38)

                                                                aTTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCg                                <  1:2447810/100‑1 (MQ=38)

                                                                   gATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGAc                             <  2:1447/100‑1 (MQ=38)

                                                                   gATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGAc                             >  1:377008/1‑100 (MQ=38)

                                                                    aTGGAAAAACTCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACa                            <  1:1912251/100‑1 (MQ=255)

                                                                    aTGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACa                            <  2:2862985/100‑1 (MQ=38)

                                                                    aTGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACa                            >  1:1058326/1‑100 (MQ=38)

                                                                      ggAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGa                          <  2:2498913/100‑1 (MQ=38)

                                                                         aaagCGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCa                       <  1:2763626/100‑1 (MQ=25)

                                                                         aaaaCGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCa                       >  2:1201161/1‑100 (MQ=38)

                                                                           aaCGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCaa                      <  2:1325645/99‑1 (MQ=38)

                                                                             cGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGAc                   <  1:5146/100‑1 (MQ=38)

                                                                             cGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGAc                   >  2:2027366/1‑100 (MQ=38)

                                                                              gCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACg                  >  2:1792143/1‑100 (MQ=38)

                                                                                tCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGa                <  2:1817915/100‑1 (MQ=38)

                                                                                  cGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATg              <  2:1343130/100‑1 (MQ=35)

                                                                                     c‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATgaga           <  2:1735098/100‑1 (MQ=38)

                                                                                     c‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATgaga           >  2:2082597/1‑100 (MQ=38)

                                                                                       aTTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGaa          >  2:246613/1‑100 (MQ=35)

                                                                                        ttCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGACCAAGACGGATGAGaaa         <  2:399112/100‑1 (MQ=25)

                                                                                         tCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAAt        >  2:1139345/1‑100 (MQ=33)

                                                                                           ttATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCt      <  2:111353/100‑1 (MQ=33)

                                                                                           ttATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCt      >  1:2352516/1‑100 (MQ=33)

                                                                                            tgtcaTAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTa     >  2:2384815/5‑100 (MQ=14)

                                                                                            tATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTa     <  2:1300121/100‑1 (MQ=33)

                                                                                            tATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTa     <  2:2445167/100‑1 (MQ=33)

                                                                                              tGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAAt   >  1:1242197/1‑100 (MQ=32)

                                                                                               gATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATg  >  2:1251740/1‑100 (MQ=32)

                                                                                               gATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATg  <  2:269815/100‑1 (MQ=32)

TCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGC‑ATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATG  >  NC_000913/1532073‑1532266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.