| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1434766 | 75 (0.720) | 15 (0.160) | 8/162 | NT | 16.2% | intergenic (‑542/+192) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | NC_000913 | 1632568 = | 87 (0.920) | intergenic (‑283/‑504) | ydfJ/ydfK | pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein/cold shock protein, function unknown, Qin prophage | |||||
Only 100 of 124 total aligned reads displayed.
CGTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAGATAA > NC_000913/1632469‑1632663 | cGTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGttt > 2:1476883/1‑100 (MQ=255)cGTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGttt > 2:666212/1‑100 (MQ=255)cGTAAAATCAAGAACGGCTGGAAAGCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGttt < 1:2575164/100‑1 (MQ=255) gTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGtttt < 1:881349/100‑1 (MQ=255) gTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGtttt > 2:107912/1‑100 (MQ=255) tAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGttttt < 1:2205623/100‑1 (MQ=255) aaaTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCa < 1:2095131/100‑1 (MQ=255) aaaTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCa > 2:726127/1‑100 (MQ=255) aaaTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCa < 1:2736484/100‑1 (MQ=255) naTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCaa > 2:1072837/2‑100 (MQ=255) aaTCAAGAACGGCTTGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCaa < 1:1383076/100‑1 (MQ=255) aTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAAc < 2:609946/100‑1 (MQ=255) aTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAAc < 1:1421662/100‑1 (MQ=255) aTCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAAc > 2:846429/1‑100 (MQ=255) tCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACt < 1:782237/100‑1 (MQ=255) gAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTc > 1:2482926/1‑100 (MQ=255) aaCGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCa < 2:2909983/100‑1 (MQ=255) aaCGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCa > 2:2069175/1‑100 (MQ=255) cGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGa < 1:662347/100‑1 (MQ=255) gCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGAt < 1:798009/99‑1 (MQ=255) gCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATa < 2:1376204/100‑1 (MQ=255) gCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATa > 2:1322660/1‑100 (MQ=255) gCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATa < 2:845068/100‑1 (MQ=255) tGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGa < 1:1400100/96‑1 (MQ=255) tGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACa < 1:432570/100‑1 (MQ=255) tGGAAATCATACAATACTCCCACTATCGAAAAATTTCCCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCATCTATGCAGATACa < 1:1261669/100‑1 (MQ=37) aaTCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCAc < 2:170846/100‑1 (MQ=255) gatctCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTc < 2:1338838/96‑1 (MQ=255) aTTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTccc > 2:1812404/1‑100 (MQ=255) aTTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTccc > 1:956780/1‑100 (MQ=255) ttCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCa < 1:2711753/100‑1 (MQ=255) cAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTcagatc > 1:1338833/1‑95 (MQ=255) cAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATc > 2:414597/1‑100 (MQ=255) aaTACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATca > 1:428638/1‑100 (MQ=255) aaTACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATca < 2:1328467/100‑1 (MQ=255) tCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCAcattc > 2:1124920/1‑100 (MQ=255) acacTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCAcattcat > 2:2157761/1‑100 (MQ=255) cacTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCAcattcatt > 2:1642293/1‑100 (MQ=255) cTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACattcattcn < 2:594709/100‑2 (MQ=255) tccaaaaaTATACCAGCCAATCGCAGCACAGTCTTGCATACGGCGTGGCTACCGCTTTTCAACCATTCAGAAACATCACGCCCATCACATCCATtcctcc < 1:1002905/97‑1 (MQ=255) tCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATtcctcc < 2:2877911/100‑1 (MQ=255) tCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGG‑TTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCg < 1:2855845/100‑1 (MQ=255) cGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCg > 1:1412843/1‑100 (MQ=255) gAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCg > 2:797412/1‑99 (MQ=255) gAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGc < 2:351583/100‑1 (MQ=255) gAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGc > 2:2557693/1‑100 (MQ=255) gAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGc > 1:1009935/1‑100 (MQ=255) gAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGc > 2:430394/1‑100 (MQ=255) aaaaaTTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCa < 1:2157748/100‑1 (MQ=255) aaaTTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATc < 2:2432011/100‑1 (MQ=255) aTTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCaa < 2:963095/100‑1 (MQ=255) agttgaaaaaccgcagacacaccttatgcaagaacgtgctgcgattTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAgg > 2:2386053‑M2/47‑100 (MQ=255) gttgaaaaaccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGc > 1:2237397‑M2/46‑100 (MQ=255) ccAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGc > 2:902281/1‑99 (MQ=255) ccAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCa > 1:489591/1‑100 (MQ=255) ccAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCa > 1:1097066/1‑100 (MQ=255) ccAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCa < 2:1834433/100‑1 (MQ=255) ccAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCa > 2:1486276/1‑100 (MQ=255) aaaaccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCAtata > 2:2649062‑M2/41‑100 (MQ=255) aaccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCCGATACATCACTCCCATCCCATTCATTCCTCCCCATCAAAGCCatat > 1:13163‑M2/39‑97 (MQ=255) aaccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAgg > 2:2150140‑M2/39‑100 (MQ=255) aaccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACCCCCATCACATTCATTCCTCCGCATCAAAGGCAtata > 2:2529471‑M2/39‑98 (MQ=255) aTCGCAGCACGTGCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATGCGGATACATAACTCCCATCACATTCATTTCTCCGCATCAAAGGCATATAGGc < 1:2396390/100‑1 (MQ=14) tCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCt < 1:2674857/100‑1 (MQ=255) ccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAg > 2:579696‑M2/37‑97 (MQ=255) ccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCt > 1:2032075‑M2/37‑100 (MQ=255) ccgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCt > 2:2280324‑M2/37‑100 (MQ=255) cgcagtcacgtcgtatgcaagaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCta > 2:2168690‑M2/36‑100 (MQ=255) cGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCta < 1:194382/100‑1 (MQ=255) gcagtcacgtcgtatgcacgaacgtgctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCtat > 2:177351‑M2/35‑100 (MQ=255) gcagcaCGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCAAATAGGCtat > 1:1722077/1‑100 (MQ=255) gcagcaCATTCGTGCATAAGGTGTGTCTGCGGTGTTTCAACTATTCAGCTACATCACTCCCATCAGAATCATTACTCCGCATCAAAGGCATCTAGTCtat > 1:1526316/1‑100 (MQ=14) agcaCGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTatat > 1:321122/1‑100 (MQ=255) gcaCGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATc > 1:2515837/1‑100 (MQ=255) caCGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCa < 1:1639202/100‑1 (MQ=255) caCGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCa < 1:752593/100‑1 (MQ=255) cGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCAcc < 1:1066791/100‑1 (MQ=255) ttCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCtt > 2:1015385/1‑100 (MQ=255) ttCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCtt < 2:1412848/100‑1 (MQ=255) ncTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTg > 1:2539335/2‑100 (MQ=255) cTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGa < 2:496574/100‑1 (MQ=255) tGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCGTATAGGCTATATCACCTTGat > 1:551630/1‑99 (MQ=255) tGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGata > 2:342580/1‑100 (MQ=255) aTAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAttt > 1:2609842/1‑100 (MQ=255) tAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttt < 1:2668780/100‑1 (MQ=40) aGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttc < 1:1124915/100‑1 (MQ=38) aGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttc > 2:1554928/1‑100 (MQ=38) aGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttc > 2:399012/1‑100 (MQ=38) aGGTGTGTCTGCGGTTTTTCAACTATTCAGAGACAACGCTCCCATCACATGCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttc < 1:912484/100‑1 (MQ=11) ggTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTAATAtttttct > 2:86283/1‑100 (MQ=38) gtgtgtCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttctt < 2:1623082/100‑1 (MQ=35) gtgtCTGCGGTTTTTCAACTATTCAGATACATCCCTCCCATCACAATCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGACAttcttcttct > 1:1920111/1‑98 (MQ=11) gtCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATAtttttctttttc > 1:1833727/1‑100 (MQ=35) tCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCa < 2:1115186/100‑1 (MQ=33) tCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCa > 2:1853439/1‑100 (MQ=35) ctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAg > 1:2443149‑M2/9‑100 (MQ=255) ctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAg < 1:1814780‑M2/92‑1 (MQ=255) ctgcggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAg > 2:963641‑M2/9‑100 (MQ=255) cggttTTTCAACTATTCAGATACATCACTCCCAGCACATTCATTCCTCCGCATCAAAGGCATATAGGCTAAATCACCTTGATATTTTTCTTTTTCAGATa > 1:1746638‑M2/6‑100 (MQ=255) ggttTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAGATaa > 1:35407‑M2/5‑100 (MQ=255) | CGTAAAATCAAGAACGGCTGGAAATCATTCAATACTCACACTATCGAAAAATTTACCAGCCAATCGCAGCACGTTCTTGCATAAGGTGTGTCTGCGGTTTTTCAACTATTCAGATACATCACTCCCATCACATTCATTCCTCCGCATCAAAGGCATATAGGCTATATCACCTTGATATTTTTCTTTTTCAGATAA > NC_000913/1632469‑1632663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |