New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2794028 =NA (NA)12 (0.120) 10/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 137 total aligned reads displayed.

GATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793961‑2794158
                                                                                                  |                                                                                                   
gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    <  2:768800/100‑1 (MQ=255)
gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  2:356906/1‑100 (MQ=255)
gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  2:2330006/1‑100 (MQ=255)
gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  1:2552974/1‑100 (MQ=255)
  cttcctgttctcgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTAc                                                                                                  >  1:2109650‑M1/66‑100 (MQ=255)
   ccGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACg                                                                                                 >  1:2534450/1‑100 (MQ=255)
     gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               <  1:1520313/100‑1 (MQ=255)
     gTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               <  1:1879130/100‑1 (MQ=255)
     cctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACggg                                                                                               >  1:111274‑M1/63‑100 (MQ=255)
       cAGGGTCTGGAGATCATCAGCCAGTGTTTTGATTAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGa                                                                                             <  1:2546139/100‑1 (MQ=255)
       cAGGGTCTGGAGATCATCAGCCAGTGTTTCGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGa                                                                                             >  2:1863598/1‑100 (MQ=255)
        gttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGAt                                                                                            >  1:1428374‑M1/60‑100 (MQ=255)
        aGGGTCTGGAGGTCATCAGCCAGTGTTTTGATGAGCCGGAGCAGTAGCGCGGCTCCTATGCCGGAGGCGACGCTGCGGGGCTTGTCCGGCCTACggg                                                                                               <  1:1006782/97‑1 (MQ=255)
        aGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGAt                                                                                            <  2:703111/100‑1 (MQ=255)
         gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                                                           <  1:70876/100‑1 (MQ=255)
          ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          >  2:867759/1‑100 (MQ=255)
          ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          <  1:1408843/100‑1 (MQ=255)
           gTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCa                                                                                         >  2:2454037/1‑100 (MQ=255)
           gTCTGGAGATCATCAGCCAGTGTGTTGATCAGTCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          <  1:2620212/99‑1 (MQ=255)
            tCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAg                                                                                        <  1:1601839/100‑1 (MQ=255)
             cTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAgg                                                                                       >  2:1268821/1‑100 (MQ=255)
             cTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAgg                                                                                       >  2:1915616/1‑100 (MQ=255)
              tGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGt                                                                                      >  2:1827595/1‑100 (MQ=255)
               ggAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTc                                                                                     <  1:807861/100‑1 (MQ=255)
                gagaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCg                                                                                    <  1:2883297/100‑1 (MQ=255)
                gagaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCg                                                                                    <  1:2632795/100‑1 (MQ=255)
                 agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  2:1352004/100‑1 (MQ=255)
                 agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:2195099/100‑1 (MQ=255)
                  gaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGa                                                                                  >  2:655737/1‑100 (MQ=255)
                    tcatcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                                                >  1:2058547/1‑100 (MQ=255)
                     catcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATaa                                                                               >  2:379684/1‑100 (MQ=255)
                         cggatgcggcgtaaccgccttctccgaccgggatccccctatGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAgg                                                                             >  2:237139‑M1/43‑98 (MQ=255)
                         aGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCg                                                                           >  2:154047/1‑100 (MQ=255)
                         aGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCg                                                                           >  1:1401928/1‑100 (MQ=255)
                          gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          >  1:2640383/1‑100 (MQ=255)
                          gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          >  1:1435814/1‑100 (MQ=255)
                               tgtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcg                                                                     <  2:2437377/100‑1 (MQ=255)
                                 ttttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgcc                                                                   <  1:843794/100‑1 (MQ=255)
                                   ttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccgc                                                                 <  1:399677/100‑1 (MQ=255)
                                    tgatgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGACGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCa                                                                >  1:826837/1‑100 (MQ=255)
                                      atgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATc                                                              >  2:2625513/1‑100 (MQ=255)
                                       tgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATcc                                                             >  1:1195219/1‑100 (MQ=255)
                                        gaGGCGAAGCAGTAGGGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCg                                                            <  2:2877077/100‑1 (MQ=255)
                                          ggCGACGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          >  2:2730679/1‑100 (MQ=255)
                                            cGAAGCAGTAGCGCCGCTCCTATGCGGGAGGCGACGCTGCGCGTCTTGTCCGGGCTACGGGGATCCAGGTCGGATGCGGCGTAAACGCCTTAGCCGAcct                                                        <  1:1000476/100‑3 (MQ=25)
                                              aaGCAGTAGCGCCGCTCCTATTCCGGAGGTGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCAGCCGACAATc                                                      <  1:248117/100‑1 (MQ=255)
                                              aaGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  2:651232/100‑1 (MQ=255)
                                              aaGCAGGAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATc                                                      <  2:1161540/100‑1 (MQ=255)
                                                gCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTg                                                    >  2:1860465/1‑100 (MQ=255)
                                                gCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTg                                                    <  1:2380958/100‑1 (MQ=255)
                                                 cAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGt                                                   <  1:2329991/100‑1 (MQ=255)
                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 <  1:990507/100‑1 (MQ=255)
                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 >  1:2254785/1‑100 (MQ=255)
                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 >  1:2062627/1‑100 (MQ=255)
                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 <  1:2061859/100‑1 (MQ=255)
                                                   gTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGATCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTAc                                                 >  1:600003/1‑100 (MQ=255)
                                                    tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                <  2:2298938/100‑1 (MQ=255)
                                                    tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                <  1:2481592/100‑1 (MQ=255)
                                                         atccccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAAc                                           >  1:1428374‑M2/42‑100 (MQ=255)
                                                          cgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  2:151223/100‑1 (MQ=255)
                                                           gcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAg                                         <  2:1519992/100‑1 (MQ=255)
                                                           gcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAg                                         >  2:1305339/1‑100 (MQ=255)
                                                            cccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        >  1:384311‑M2/39‑100 (MQ=255)
                                                            cccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        >  1:111274‑M2/39‑100 (MQ=255)
                                                            cccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAgg                                        >  1:2707300‑M2/39‑100 (MQ=255)
                                                             tCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       <  2:2591721/100‑1 (MQ=255)
                                                             tCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       <  2:2759101/100‑1 (MQ=255)
                                                             ccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       >  2:1382437‑M2/38‑100 (MQ=255)
                                                               gtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGAGAACAGgaag                                     >  1:2109650‑M2/36‑100 (MQ=255)
                                                                 aggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaagaa                                   <  2:111275‑M2/67‑1 (MQ=255)
                                                                 aTGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaagaa                                   >  2:157496/1‑100 (MQ=255)
                                                                  ggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGaaa                                  >  1:30659‑M2/33‑100 (MQ=255)
                                                                   gccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt                                 >  2:2121404‑M2/32‑100 (MQ=255)
                                                                    ccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATc                                >  2:1001413‑M2/31‑100 (MQ=255)
                                                                    CCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATc                                <  2:571490‑M1/100‑1 (MQ=255)
                                                                      ggacaagacgcgcagcgtcttgtccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              >  2:2216735‑M2/29‑100 (MQ=255)
                                                                      GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  1:1672950‑M1/100‑1 (MQ=255)
                                                                        AGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGCTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATg                            >  1:1618940‑M1/1‑100 (MQ=255)
                                                                         ggCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGTATCCGACAATCTGTACGTGAACAGCAAGAAATCTATGt                           <  1:1798981/100‑1 (MQ=255)
                                                                           cGACGCTGCGCGTCTTGTCGGGCCTATGGGGATCGAGGTCGGATAAGGCGTTTACGCGGCGTGCGACAATCTGTACGGGAACAGGAAGAAATCTagggtg                         >  2:2042610/1‑95 (MQ=255)
                                                                           cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaagaagatcggaaga                         >  2:2393879/1‑90 (MQ=255)
                                                                           cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         >  1:411672/1‑100 (MQ=255)
                                                                           cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         <  2:554057/100‑1 (MQ=255)
                                                                             aCGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGc                       >  1:783877/1‑100 (MQ=255)
                                                                               gCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCg                     <  2:118523/100‑1 (MQ=255)
                                                                                   cgcgTCTTGTGCGGCCTACGGGGAACCAGGACGGATAAGGCGTTTACGCCGCATCCGACAATCTGTATGTGAACAGGAAGAAATCTATGTTGGCCg                     >  1:1884780/1‑96 (MQ=38)
                                                                                   cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                 >  1:331340/1‑100 (MQ=255)
                                                                                     cgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAg               >  1:1488171/1‑100 (MQ=255)
                                                                                      gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              >  1:1038096/1‑100 (MQ=255)
                                                                                       tCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGGACAGGAAGAAATCTATGTTGGCCGGGTAAGGc             <  2:2770381/100‑1 (MQ=255)
                                                                                        cTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCg            >  2:1632534/1‑100 (MQ=255)
                                                                                          tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa          >  2:18249/1‑100 (MQ=255)
                                                                                           gTCCGGCCTACTGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATGCGACAAGCTGTACGTGGACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg         >  1:1584479/1‑100 (MQ=38)
                                                                                           gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg         >  1:1936470/1‑100 (MQ=255)
                                                                                            tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        <  1:2094283‑M2/94‑1 (MQ=255)
                                                                                            tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        <  2:1481802‑M2/94‑1 (MQ=255)
                                                                                             ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       >  1:2336‑M2/6‑100 (MQ=255)
                                                                                             ccggcCTACGGGGATCCAGGTCGGATAAGGCGTGTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       <  1:2842535‑M2/95‑1 (MQ=255)
                                                                                              cggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCg      >  2:1551321‑M2/5‑100 (MQ=255)
                                                                                                  cTACGGGGATCCAGGTCGGATAAGGCTTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct  <  1:1389413/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
GATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793961‑2794158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.