New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3214896 =NA (NA)9 (0.090) 7/168 NT NA noncoding (5/33 nt) REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences REP227 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3214925 = NA (NA)intergenic (+37/+42) rpoD/mug RNA polymerase, sigma 70 (sigma D) factor/G/U mismatch‑specific DNA glycosylase; xanthine DNA glycosylase

Only 100 of 165 total aligned reads displayed.

GCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTC  >  NC_000913/3214826‑3215024
                                                                                                   |                                                                                                   
gcgcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCa                                                                                                     >  1:184536/1‑100 (MQ=255)
 cgcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAAGCCGCACCCGGCAc                                                                                                    >  1:1984549/1‑100 (MQ=255)
 caggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCAc                                                                                                    >  1:848203‑M1/70‑100 (MQ=255)
  gcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGTCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt                                                                                                   <  1:626084/100‑1 (MQ=255)
  gcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt                                                                                                   >  2:713437/1‑100 (MQ=255)
   ggcgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCACTa                                                                                                  >  2:2356107‑M1/68‑100 (MQ=255)
    tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg                                                                                                 >  1:2500388/1‑100 (MQ=255)
    tGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg                                                                                                 <  2:1298568/100‑1 (MQ=255)
     cgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCAc                                                                                                    >  1:2344083‑M1/66‑96 (MQ=255)
     cgctggtagtgcgtgggcgataaaaaacgccaccgaaaaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg                                                                                                >  1:2274509‑M1/66‑100 (MQ=255)
      gctggtagtgcgtgggcgataaaaaacgccaccgaagaggtggcgtttgtgcagagggcctagtGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               >  1:2874567‑M1/65‑100 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  1:516422/100‑1 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  2:751293/100‑1 (MQ=255)
      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc                                                                                               <  2:2200159/100‑1 (MQ=255)
        cAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGccc                                                                                             <  2:1024859/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         <  1:310282/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         <  1:2151924/100‑1 (MQ=255)
            cTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTg                                                                                         >  1:2580324/1‑100 (MQ=255)
            cTGCGTCACACGAGCCGTTCTGAAGTGCGGCGTAGCGTCCTGGACGATTAAGCGGTAGGCCGGATCAGGCGTTACGCCGTACCCGGCACTAGGCCCTCTg                                                                                         <  1:2152053/100‑1 (MQ=255)
             tGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc                                                                                        <  2:1576272/100‑1 (MQ=255)
             tGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc                                                                                        <  1:2219937/100‑1 (MQ=255)
              gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca                                                                                       <  1:723817/100‑1 (MQ=255)
              gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca                                                                                       <  2:2066245/100‑1 (MQ=255)
              gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca                                                                                       <  2:2078123/100‑1 (MQ=255)
              gCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc                                                                                        >  1:570712/1‑99 (MQ=255)
                 tCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACaa                                                                                    <  2:127426/100‑1 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGATGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCGCAAACg                                                                                 <  1:899330/100‑1 (MQ=255)
                    cccGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACg                                                                                 <  1:427209/100‑1 (MQ=255)
                        aGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAc                                                                             >  1:1640340/1‑100 (MQ=255)
                        aGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAc                                                                             >  1:1640531/1‑100 (MQ=255)
                         gCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCAcc                                                                            >  2:1926288/1‑100 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                                                         >  2:226636/1‑100 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                                                         >  1:911190/1‑100 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                                                         >  2:691484/1‑100 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCtt                                                                          >  2:752246/1‑99 (MQ=255)
                            gTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTGACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCttt                                                                         >  1:1859573/1‑100 (MQ=255)
                              tCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTc                                                                       <  1:1168856/100‑1 (MQ=255)
                               cTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCg                                                                      <  1:1101095/100‑1 (MQ=255)
                                tGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCgg                                                                     >  2:2320804/1‑100 (MQ=255)
                                tGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCgg                                                                     >  2:2883881/1‑100 (MQ=255)
                                tGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCgg                                                                     >  1:3380/1‑100 (MQ=255)
                                 gAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGt                                                                    <  2:2029528/100‑1 (MQ=255)
                                   aGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCCCAAACGCCACCTTTTCGGTgg                                                                  >  1:121015/1‑100 (MQ=255)
                                   aGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTgg                                                                  <  2:248456/100‑1 (MQ=255)
                                     tgctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCg                                                                <  2:787289/100‑1 (MQ=255)
                                       ctgcGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtt                                                              >  1:642720/1‑100 (MQ=255)
                                          cGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGttttt                                                           <  2:1964556/100‑1 (MQ=255)
                                           gTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttttt                                                          <  2:2159398/100‑1 (MQ=255)
                                           gTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttttt                                                          >  1:1678969/1‑100 (MQ=255)
                                           gTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttttt                                                          <  2:2135329/100‑1 (MQ=255)
                                           gTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGtttttg                                                          <  2:43412/100‑2 (MQ=255)
                                            tAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTa                                                         <  2:2813106/100‑1 (MQ=255)
                                             aGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTAt                                                        <  2:1571405/100‑1 (MQ=255)
                                                 tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTGCGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                                                    >  2:2057191/1‑100 (MQ=255)
                                                 tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACTCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                                                    <  1:947506/100‑1 (MQ=255)
                                                 tCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGcc                                                    <  1:125149/100‑1 (MQ=255)
                                                  ccTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGccc                                                   <  1:1386514/100‑1 (MQ=255)
                                                  ccTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGccc                                                   <  2:652302/100‑1 (MQ=255)
                                                       aCGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCa                                              <  1:758469/100‑1 (MQ=255)
                                                         gATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCAc                                             <  1:2844688/99‑1 (MQ=255)
                                                          aTTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTCTCGCCCACGCACTa                                           >  1:985561/1‑100 (MQ=255)
                                                          aTTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTa                                           <  2:2661125/100‑1 (MQ=255)
                                                           ttAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAc                                          <  2:2737616/100‑1 (MQ=255)
                                                            tAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTAcc                                         <  1:1043747/100‑1 (MQ=255)
                                                              aTCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAg                                       <  2:2619680/100‑1 (MQ=255)
                                                               gcctagtgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTCTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgc                                      >  1:2874567‑M2/37‑100 (MQ=255)
                                                                 ggTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcgc                                    >  2:1874319/1‑100 (MQ=255)
                                                                  tagtgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGcc                                   >  2:2356107‑M2/34‑100 (MQ=255)
                                                                  gTAGGCCGGATCAGGCGTTACGCCGGACCCGGCACTAGGCCCTCTGCACAAACGCCGCCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGcc                                   <  1:389140/100‑1 (MQ=255)
                                                                  gTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGTCACCGTTTCGGTGGCGTGTTTTATCGCCCACGCATTGCCAGCGcc                                   <  1:1576553/100‑1 (MQ=38)
                                                                  gTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGcc                                   <  2:529162/100‑1 (MQ=255)
                                                                    gtgccgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAgcg                                     >  1:2344083‑M2/32‑96 (MQ=255)
                                                                     ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg                                >  1:2458188/1‑100 (MQ=255)
                                                                     ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg                                >  1:2158968/1‑100 (MQ=255)
                                                                     ggCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTgg                                >  2:2283842/1‑100 (MQ=255)
                                                                      nCCGGATCAGGCGTTACGCCGCACCCGGCACTAGCCCCTCTGCACAAACGCCACCTTTTCGGTCGCGTTTTTTATCGCCCACGCACTACCAccgc                                    <  1:1892047‑M1/94‑1 (MQ=255)
                                                                      GCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGt                               <  2:887467‑M1/100‑1 (MQ=255)
                                                                        cgggtgcggcgtaacgcctgatccggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTcc                             >  1:1606954‑M2/28‑100 (MQ=255)
                                                                        CGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTcc                             >  2:1494248‑M1/1‑100 (MQ=255)
                                                                        CGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTcc                             >  2:387607‑M1/1‑100 (MQ=255)
                                                                          GATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAg                           >  1:1096765‑M1/1‑100 (MQ=255)
                                                                          GATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAg                           >  2:1677463‑M1/1‑100 (MQ=255)
                                                                           aTCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGc                          <  2:1637147/100‑1 (MQ=255)
                                                                               ggCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgc                      <  1:1687070/100‑1 (MQ=255)
                                                                                gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgcg                     <  1:1480085/100‑1 (MQ=255)
                                                                                gCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTcgcg                     <  1:517577/100‑1 (MQ=255)
                                                                                 cGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCTAGCTCGCGa                    >  1:996828/1‑100 (MQ=255)
                                                                                  gTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGAt                   >  1:1660329/1‑100 (MQ=255)
                                                                                      cgccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGc               <  2:1783480/100‑1 (MQ=255)
                                                                                      cgccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGc               >  2:283776/1‑100 (MQ=255)
                                                                                      cgccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTGTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGCTACGc               >  1:1067903/1‑100 (MQ=255)
                                                                                       gccgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCt              <  2:1824298/100‑1 (MQ=255)
                                                                                         cgcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTAGCGATACGc               <  1:1806835/97‑1 (MQ=255)
                                                                                          gcACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCa           >  2:2697343/1‑100 (MQ=255)
                                                                                           cACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCaa          <  2:695994/100‑1 (MQ=255)
                                                                                             cccGGCACTAGGCCCTCTGCACAAACGCCCCCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCCTCAAcc        >  2:279712/1‑100 (MQ=255)
                                                                                             cccGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAAcc        <  1:2233531/100‑1 (MQ=255)
                                                                                               cggcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAg      >  2:1714040‑M2/5‑100 (MQ=255)
                                                                                                 gcACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGtt    <  1:1874310‑M2/98‑1 (MQ=255)
                                                                                                   aCTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTtc  <  2:2678478/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCACAAACGCCACCTTTTCGGTGGCGTTTTTTATCGCCCACGCACTACCAGCGCCTGGTCCAGCTCGCGATACGCTTCAACCAGTTTC  >  NC_000913/3214826‑3215024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.