New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3620123 = | NA (NA) | 7 (0.070) | 6/166 | NT | 100% | coding (932/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3620147 = | 0 (0.000) | coding (956/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC > NC_000913/3620049‑3620246 | ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc < 2:768150‑M2/2‑1 (MQ=255) ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc > 2:525682‑M2/99‑100 (MQ=255) ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc > 1:529956‑M2/99‑100 (MQ=255) ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc > 1:492956‑M2/99‑100 (MQ=255) cggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcg < 1:892301‑M2/3‑1 (MQ=255) cggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcg < 1:413566‑M2/3‑1 (MQ=255) ggtatttatcatcgtaagtaaagctgcgcatctgtttgccagtacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg < 1:1370847‑M2/4‑1 (MQ=255) gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 2:1010848‑M2/5‑1 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg < 1:2637257‑M2/6‑1 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg > 2:1681615‑M2/95‑100 (MQ=255) atttatcatcgtaagtaaagcttcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 1:2681810‑M2/5‑1 (MQ=255) ttctcgtcgtaagtaaagctgcccacttttttgccactactgtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcgcg < 1:2390741‑M2/8‑3 (MQ=255) atcgtaaggaaagctgcgcacctgtttgccactacggtcatacactaccgccagttcgcagcgtggcgtccagccatagcgcacaagcggcg > 1:2849825‑M2/87‑92 (MQ=255) aagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATg < 2:69331‑M2/24‑1 (MQ=255) gttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgat > 1:807056‑M2/39‑100 (MQ=255) ttcgccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatg > 2:2792868‑M2/38‑100 (MQ=255) cagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACgatgat > 1:376285‑M2/36‑100 (MQ=255) gccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATa > 2:1006916‑M2/35‑100 (MQ=255) gccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATa > 2:29855‑M2/35‑100 (MQ=255) cgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATa > 1:1201140‑M2/31‑100 (MQ=255) GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCacac < 2:2614539‑M2/100‑1 (MQ=255) | CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC > NC_000913/3620049‑3620246 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |